G31090


Basic Information

Item Value
gene id G31090
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24122812 ~ 24125661 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU45933
TCAGTACCTTGAAGGGCCGCGGAGTGACGTAGCTGTATTTGCCCGACCACAGCTGCTTGATGAGCTCGGCGTAGGCCTTGGCGATCTCTCCCTTCATGCCCAGAGGATTGTCCTGGTTCAGCTCGACCTGGTGCCGGTCCTTCAGGAAGTACTGGGTGAGGGGCGGGACGTtgctcagacactgaaacacacaaacaacacacaggCTGAGCTTTGGACACACTCTCGGGAGCGCAGGCTGAGCGTGAGCAGCTCACCTGTGTGGCCGAGTTCATGAAGCAGGTGTTGCCCAGGTTAGACAGGCCGCAGAGGCCCTCTCTCTCACAGCGCCGGCCCTGATCCGAGCTCTCGTAGCTGCTGTAGGGAGGGTAGGAGGGCAGGCTGTAGCTGGAGCTCTTCAcgctgcgcgcacacacacacacacacacacacaccgggtGTGAGAGCAACAAGCACAGCAGCAGAGAGCAGCTGATCAGAGCCACACTAAACATGCAGACGACTCAACACACTGCTCAAACCCTGCACACGCTCCAATATCAGTCAGAAGACAGGTAACGCAGGGCAGAAGCACTTACTTTTTCCACAGAATTTCTGTAGGTGATTTAGAATAAAAGACCTGCACGCAAGTCAACTTTTTAACATGTGTTAAAGAATTAGTTCACTACCAGAATAAACATTTGCtgatattttactcaccccccaCATCATCccaactgtctgtctgtcttcagtCTCAGAGAAACTACATAGTGCACTTCAGTGTTGTGTTAAAGGTTCAAACTGCAGATTCAGCTTCAAATAGCTTCACACAACCCCATCCAAAGAATAGGGCTCTTATCTAGCCAAACCATCGGTCACATCGGGTACTTTTTAACCACGAAAGCGTATCAgaagaaaacgtttttttatatataggaCCTTTGCATAAACCCAAGGTCAGTTTACATATGTTTGATACATCGCACAATccaaatacaatatgaacacacaACATATAGGTGTTATCCAAAGTGCATATAAAACAGATATGCTTTTAACTAACTCTTGAAAACAAAGATAAGATACTGTGGAGAGTCAGGGGTAGTGAGTCCCATAGCAgcattaaaactaaatgacCTTCCACCAACAGTAGCCTACTGAAAACGAGATACGGTGAGAGTGACGGGGCAGGGCGGTATGGGTGGAGGAGCTCAGCTAAATATGGTGGTGCAAGACCATTCAGTGCCTCAGATGTTAGAAGCAATAACATAAAGTGAATGCGTGATGCGACAGACAACCGTGAGCAGAACCTCCGGTGGAGGTGAGGACACTTGCAGCAGAATTTTGAAAATACTATAATCTcgcaatacattttttgggaAGGTCTGCAAATAGTGAAGTGCAATAATCTAGACAAGATGTGATTCGCATGAATTTAAATTTCCCCATCGACTAGAGTGAGTGAAGATCTGAGATATTACACAGGAGAAAGAAGAAGTTTTTAACAACAGTGGAAATATAGGAATCAAAAGATAAAGTTGAGTCGAAATAAAGCACCAAgactgtagacagatgaagaagCTGTAACATAGATCCCACTGATGTCAAGGGACAGGTTCACTGTTTATACAGAAATAGCAGAGCCAATaatcaatatttacattttgtcattacttAATTTCAAGAAACTGAGGGACATCCAAAGGTTTGATGTGCCTGATTCAAGCAGTGAGTGAATCAAGGTATATTTGGATATCATCAGAAtaacaatgaaactgaaatccATGCGTGCTTGTGATGTTACCAagtagataaatatatatacagtgaaCAGGAAAGGGCCGAGAACTGAACCTTGGGGAACACCATGTGGGAGATTTACACCCTTGCATagtgacaaaatattttctattgcaTATATAGGACCAGCTTGACTTCATGCATCATATACTCATGTAGGAAATGTGTGTTAGCTCTTCGTCTATGTACCCTGGTTCTAAAAGGTACAGTAGTGTGGAAAATTCAAGTAGagtttttttttgaagctgcACTAAAACTGTTGAGCACCactgaagtccactatatggagaaaaTCCCTCCAATGTTTTCCTCAAGAACCTTAATTTCTTTGagactgaagacagaaagaaatCTCGGATGACCTGGGTATGAGTAAATTATCAGGTGACTAACTACTTAAGACTAGTCTAAACAGTTTATGCAACCGGACCCTGATGTATACTTCATTCACCAGATTacatttcagtaaaataaataaagtgctaGCATTCAGCATTAAAGCGAAGCTTGAGCAGCATCAGCAGCTAACGAATGATCACTGCTAACTGAACAGCACACAATAAGTcctttcccacaatgcactgcagcTACGAGCATCACGCTTACTGAAGTGAGCGCAGGACAAAAGCGCCTTGGATAAAAGCGTAACGTACATGTAACTGTCTTTATAGCCAATGTGGTGTGATTTCTCTCATATCGCTGAACATGCGAGCGAAATGAACCATCCttcagtgtgtgcatgtgtcaaGAGCAGGATCAATCGTTTCAATCAGTGACGTCACAAATTGATGGCACAGGACACACAGCCCCACCCCCTGCAGGCTTACTTGCGGCCGCTGAAGCTGCTGTTATGATTGTTTGTGAGAGATGAAGGGCAGATCTTTGgtaaagcagagagagaggaagcacCAGACGACCTTCAAGAGACAAGAAGAGCGAGAGTTACAGGAGATGAGCTGGAGGAGACAAGCAGGTGTCCGAGCAAgggctctgaagcagtcaggagaCGTCCCATGACTCACTTGAGCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU45933 True 2813 lncRNA 0.45 2 24122812 24125661

Neighbor

gene id symbol gene type direction distance location
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 193278 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 394894 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 863493 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 872198 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 885732 23230042 ~ 23237080 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 81994 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 139688 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 187181 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 351335 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 359701 24485362 ~ 24492499 (-)
G31082 LOC107710764 non-coding downstream 21945 24100450 ~ 24100867 (-)
G31072 NA non-coding downstream 86061 24036349 ~ 24036751 (-)
G31063 NA non-coding downstream 112762 24003692 ~ 24010050 (-)
G31062 NA non-coding downstream 113197 24002866 ~ 24009615 (-)
G31088 NA non-coding upstream 1286 24126947 ~ 24127908 (-)
LOC122343167 NA non-coding upstream 86406 24212067 ~ 24215572 (-)
G31109 LOC107656690 non-coding upstream 124175 24249836 ~ 24426069 (-)
G31115 NA non-coding upstream 173119 24298780 ~ 24540339 (-)
G31127 NA non-coding upstream 179594 24305255 ~ 24312292 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 12139 24110224 ~ 24110673 (-)
G31050 NA other downstream 351044 23745486 ~ 23771768 (-)
G31017 NA other downstream 576443 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 685797 23416891 ~ 23437015 (-)
G30450 NA other downstream 1877652 22128454 ~ 22245160 (-)
G31134 NA other upstream 178435 24304096 ~ 24497596 (-)
G31120 NA other upstream 180840 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 198309 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 628395 24754056 ~ 24760786 (-)
G31314 NA other upstream 1433379 25559040 ~ 25561198 (-)

Expression


Co-expression Network