G31152


Basic Information

Item Value
gene id G31152
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24424927 ~ 24433401 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46039
CATGTCAAAGTCTCACGCTACCAAGTGGGCCCTAGGGCTGTTACACAAGACATGTTTTTCCCTATTGATCACACTTATTCACCCTATAGGTGAAATCATACTGACTGTACATATTTACAGCTAATATATTAGTGTGGGATTAGCATTACCCAAGGTCACCGTGATCTTAACTGACAttgtacaaaattatatattactggTAATACTTCATTGCACCTCTTCACGTAAAACTAGTCCTGTCGGAATAAGACTTAAAGAGTACAATCGGGTGCATTCATAGGGCGACTATGTGTGCCATTTTTCCCAGACACGTCCTTGCCAGCATCTGTATTCTGATTCaaagtacattttgaaaacataaggaaCCAATGTCATACACCGATCTGTGAAttacaaagccaaaacctagatattttaggctATATAGGACTCCTGGCTAGGATGTGTCTGCGCCAGGGAAAAATGACTTATGGTGACCCTAATGAATGTGCtaatgcaatgttttaattGGACTCAGAACTGAATTGTCTTTCTTCTGAGGGAATGTGCAGATAACTGTTAAAATTGCCAATTTGCTCAGTGTGACAGGAATGAGTTTTCCAGTGTCGTTTCAGGTCTGTGTGATACGTGAAGCTGGTGTCACACTGAGGACActtgtaaggcttctctccagtgtgaattctcatgtgaaTCTTAAGATTTCCTTTAGCCgtgaagctctttccacactgaggacAGGTGAAGGGTTTCTCTCCGGAGTGAGTTCTCATGTGATTCTCAAAGTTTCCTTTGTGTgagaaactcttcccacactgctGACATATAAAACAGTTCTCTCCCGAGTGACTCTTCATGTGAAGATCAAGGTGTCCTTTACACCTGAAACTCTTTTCACACAGATCACAAACAAACggcttctctcccgtgtgaATTGTCATGTGATCATTGAGGTACTTCTTCTgtttaaaactctttccacactgagagcagatGAACGTTTTCTCTCCGCTGTGAATTCCTGTGTGAAATGTAagattttcctttcttttgtaGCTCTTCCCACACAGTTCACAAGTGTAAGgtctctctccagtgtggagTTTGGGTTTTCTAGTCGATGAGTAAGAACTAGATTCTTCTCCAGTCATGAAATCATTATGTTTGTCAAACTGATTTTTCTCTTCTATTACTTTGGATTCTTGTCTATCCTCTTTCAGCGTCATCAGGTCTGGAGTgaaaagaaacataaaacaagACAACACCAGTTTAAAAGCACCAAGACGTGAAAGCTTTTAGACAGTAAAACGTCACATTTAACCACTAGATTATACATCcactaaacaaataaagcacctcttaaaataaatcaaacataaaTCAGGATCAGgcagtttat
>TU46040
CATGTCAAAGTCTCACGCTACCAAGTGGGCCCTAGGGCTGTTACACAAGACATGTTTTTCCCTATTGATCACACTTATTCACCCTATAGGTGAAATCATACTGACTGTACATATTTACAGCTAATATATTAGTGTGGGATTAGCATTACCCAAGGTCACCGTGATCTTAACTGACAttgtacaaaattatatattactggTAATACTTCATTGCACCTCTTCACGTAAAACTAGTCCTGTCGGAATAAGACTTAAAGAGTACAATCGGGTGCATTCATAGGGCGACTATGTGTGCCATTTTTCCCAGACACGTCCTTGCCAGCATCTGTATTCTGATTCaaagtacattttgaaaacataaggaaCCAATGTCATACACCGATCTGTGAAttacaaagccaaaacctagatattttaggctATATAGGACTCCTGGCTAGGATGTGTCTGCGCCAGGGAAAAATGACTTATGGTGACCCTAATGAATGTGCtaatgcaatgttttaattGGACTCAGAACTGAATTGTCTTTCTTCTGAGGGAATGTGCAGATAACTGTTAAAATTGCCAATTTGCTCAGTGTGACAGGAATGAGTTTTCCAGTGTCGTTTCAGGTCTGTGTGATACGTGAAGCTGGTGTCACACTGAGGACActtgtaaggcttctctccagtgtgaattctcatgtgaaTCTTAAGATTTCCTTTAGCCgtgaagctctttccacactgaggacAGGTGAAGGGTTTCTCTCCGGAGTGAGTTCTCATGTGATTCTCAAAGTTTCCTTTGTGTgagaaactcttcccacactgctGACATATAAAACAGTTCTCTCCCGAGTGACTCTTCATGTGAAGATCAAGGTGTCCTTTACACCTGAAACTCTTTTCACACAGATCACAAACAAACggcttctctcccgtgtgaATTGTCATGTGATCATTGAGGTACTTCTTCTgtttaaaactctttccacactgagagcagatGAACGTTTTCTCTCCGCTGTGAATTCCTGTGTGAAATGTAagattttcctttcttttgtaGCTCTTCCCACACAGTTCACAAGTGTAAGgtctctctccagtgtggagTTTGGGTTTTCTAGTCGATGAGTAAGAACTAGATTCTTCTCCAGTCATGAAATCATTATGTTTGTCAAACTGATTTTTCTCTTCTATTACTTTGGATTCTTGTCTATCCTCTTTCAGCGTCATCAGGTCTGGAGTgaaaagaaacataaaacaagACAACACCAGTTTAAAAGCACCAAGACGTGAAAGCTTTTAGACAGTAAAACGTCACATTTAACCACTAGATTATACATCcactaaacaaataaagcacctcttaaaataaatcaaacataaaTCAGGATCAGgcagtttat

Function

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0006259 DNA metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU46039 True 1396 lncRNA 0.40 2 24424927 24433401
TU46040 False 1396 lncRNA 0.40 2 24424927 24433401

Neighbor

gene id symbol gene type direction distance location
LOC122342338 NA coding downstream 105815 24312842 ~ 24319112 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 158320 24265349 ~ 24266607 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding downstream 204919 24207655 ~ 24220008 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 495393 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 697009 23725752 ~ 23727918 (-)
ckap4 NA coding upstream 43595 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 51961 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 108737 24542138 ~ 24544170 (-)
LOC122342998 NA coding upstream 124731 24558132 ~ 24564000 (-)
LOC122342983 NA coding upstream 149566 24582967 ~ 24593953 (-)
G31142 NA non-coding downstream 92364 24331877 ~ 24332563 (-)
LOC122343180 NA non-coding downstream 110606 24313790 ~ 24314321 (-)
G31127 NA non-coding downstream 112635 24305255 ~ 24312292 (-)
LOC122343167 NA non-coding downstream 209355 24212067 ~ 24215572 (-)
G31088 NA non-coding downstream 297019 24126947 ~ 24127908 (-)
LOC122343161 LOC107743936,LOC101883431 non-coding upstream 12128 24445529 ~ 24448290 (-)
G31124 NA non-coding upstream 20060 24453461 ~ 24464894 (-)
G31121 NA non-coding upstream 24013 24457414 ~ 24458259 (-)
G31155 NA non-coding upstream 31962 24465363 ~ 24466556 (-)
G31161 NA non-coding upstream 80555 24513956 ~ 24552855 (-)
LOC122342340 NA other downstream 97664 24323970 ~ 24327263 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 314254 24110224 ~ 24110673 (-)
G31050 NA other downstream 653159 23745486 ~ 23771768 (-)
G31017 NA other downstream 878558 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 987912 23416891 ~ 23437015 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 320655 24754056 ~ 24760786 (-)
G31314 NA other upstream 1125639 25559040 ~ 25561198 (-)
G31394 NA other upstream 1740298 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 1891078 26324479 ~ 26325236 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 2933011 27366412 ~ 27367649 (-)

Expression


Co-expression Network