G31165 (LOC107685875,LOC107671223,LOC107570416,LOC107728228,LOC107749047)


Basic Information

Item Value
gene id G31165
gene name LOC107685875,LOC107671223,LOC107570416,LOC107728228,LOC107749047
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24553418 ~ 24683082 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46063
TGGATTCTTTAACCACAGGTAACAGATACTGAAGAACTTCATCTCCTGTATGTTGTTCTCCAATAAACTGTTTTAGATCAAAAACATCCATCTTCTGCTCTGATGTCAGCAACACATAAACCAGAGCTGACCACTGAGAAGAGGAGAGTTTGACTTCTCTTATTCCTCCAGATTTCAGATAACCCTGGATCTCCtgcatcagtgaatcatcaCCCAGTTCAATCAGACAGtgaaacagattgatggatttcTCTGAAGAGTGATTCTCACTGATCTTCCTTTTGATGAACTGAACTGTTTCCTCTTTGTTGTAGGAgcagcttcctgtctgtgtcAGTAGTTTTCTTAAGAGAGTCTGATTGGACTCCACTGAGAGACCCAGAAGAAACCGCAAGAAAAGGTCTAGATGTCCATTCTTACTCTTTAGAGTCTCGTTCACAGCTCTCTGATGCAGCTCagataatgaattatatttattctggtaaaatatcttGGACAATAGACTGTGTTTGGTTTGGTTGAAAACATTTCTCTTCTTGTTTGTAAAAGAGAGATGCGCATATAGAGCTGCTAGATGTTCCTGAAGGCTCAGGTGAACGAAGCAGAAGACTTTCCCCTGAAACAAGCCCAgctcctctctgaagatctgagtgcacaGTCCTGAATAAACTGATGCTTCTGTCTCATCAATGCCACACTCTCTCAGGTCTTCATCATAGAAGATCAGGTTTCCTTTCACAAGCTGCTGGAAAGCCAGTTTCCCCAGTTTGAGGATCATGTCTTTATCAGTCACCTTCTTCTTATAGTCCttctcatgtttgatgttggtctgaaggatcaggaagtgtgtgtacatttgagtgagagTCTTGGGAATCTCTCCAGTCTCTGCTCGACTCAAGATCTTCTCAAGAACagtggctgagatccagcagaagactgggatgtgacacatgatgaaGAGGCTCCTGGAGGACTTCAGGTGTGAGATGATCCTGTCGGCCAGACTCTGATCACTGATCCTCTTCCTGAAGTATTCCTCCTTCTGTGTCTCATTGAAGCCTCGTACCTCTGTCACTCGATGGACGCACTCAGAGGGGACgagatcagctgctgctggtctggaggtgatccagatgagagcagagggaagcagattccccacaatcaggttcatcagcagcacatcCACTGAGGCTGACTCAGATATATTACACAGATTCACTTTACTCTTAAAGTCCAGAGACAGACGACACtcgtccagaccatcaaagatgaacaacac
>TU46065
TGGATTCTTTAACCACAGGTAACAGATACTGAAGAACTTCATCTCCTGTATGTTGTTCTCCAATAAACTGTTTTAGATCAAAAACATCCATCTTCTGCTCTGATGTCAGCAACACATAAACCAGAGCTGACCACTGAGAAGAGGAGAGTTTGACTTCTCTTATTCCTCCAGATTTCAGATAACCCTGGATCTCCtgcatcagtgaatcatcaCCCAGTTCAATCAGACAGtgaaacagattgatggatttcTCTGAAGAGTGATTCTCACTGATCTTCCTTTTGATGAACTGAACTGTTTCCTCTTTGTTGTAGGAgcagcttcctgtctgtgtcAGTAGTTTTCTTAAGAGAGTCTGATTGGACTCCACTGAGAGACCCAGAAGAAACCGCAAGAAAAGGTCTAGATGTCCATTCTTACTCTTTAGAGTCTCGTTCACAGCTCTCTGATGCAGCTCagataatgaattatatttattctggtaaaatatcttGGACAATAGACTGTGTTTGGTTTGGTTGAAAACATTTCTCTTCTTGTTTGTAAAAGAGAGATGCGCATATAGAGCTGCTAGATGTTCCTGAAGGCTCAGGTGAACGAAGCAGAAGACTTTCCCCTGAAACAAGCCCAgctcctctctgaagatctgagtgcacaGTCCTGAATAAACTGATGCTTCTGTCTCATCAATGCCACACTCTCTCAGGTCTTCATCATAGAAGATCAGGTTTCCTTTCACAAGCTGCTGGAAAGCCAGTTTCCCCAGTTTGAGGATCATGTCTTTATCAGTCACCTTCTTCTTATAGTCCttctcatgtttgatgttggtctgaaggatcaggaagtgtgtgtacatttgagtgagagTCTTGGGAATCTCTCCAGTCTCTGCTCGACTCAAGATCTTCTCAAGAACagtggctgagatccagcagaagactgggatgtgacacatgatgaaGAGGCTCCTGGAGGACTTCAGGTGTGAGATGATCCTGTCGGCCAGACTCTGATCACTGATCCTCTTCCTGAAGTATTCCTCCTTCTGTGTCTCATTGAAGCCTCGTACCTCTGTCACTCGATGGACGCACTCAGAGGGGACgagatcagctgctgctggtctggaggtgatccagatgagagcagagggaagcagattccccacaatcaggttcatcagcagcacatcCACTGAGGCTGACTCAGATATATTACACAGATTCACTTTACTCTTAAAGTCCAGAGACAGACGACACtcgtccagaccatcaaagatgaacaacacttCATATTCATCGctggatatttccatttc

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46063 False 1285 lncRNA 0.44 2 24553448 24683082
TU46065 True 1315 lncRNA 0.44 2 24553418 24683082

Neighbor

gene id symbol gene type direction distance location
LOC122342346 LOC107581033 coding downstream 9248 24542138 ~ 24544170 (-)
LOC122343108 LOC107677819,LOC107725800 coding downstream 60919 24485362 ~ 24492499 (-)
ckap4 NA coding downstream 73504 24476996 ~ 24479914 (-)
LOC122342338 NA coding downstream 234306 24312842 ~ 24319112 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 286811 24265349 ~ 24266607 (-)
LOC122342349 NA coding upstream 280892 24963974 ~ 24981623 (-)
LOC122342351 NA coding upstream 349052 25032134 ~ 25034674 (-)
LOC122343864 NA coding upstream 668907 25351989 ~ 25352153 (-)
LOC122343882 NA coding upstream 669317 25352399 ~ 25352587 (-)
LOC122343852 NA coding upstream 670839 25353921 ~ 25354084 (-)
G31161 NA non-coding downstream 563 24513956 ~ 24552855 (-)
G31115 NA non-coding downstream 13079 24298780 ~ 24540339 (-)
G31155 NA non-coding downstream 86862 24465363 ~ 24466556 (-)
G31124 NA non-coding downstream 88524 24453461 ~ 24464894 (-)
G31121 NA non-coding downstream 95159 24457414 ~ 24458259 (-)
G31192 NA non-coding upstream 4446 24687528 ~ 24688132 (-)
G31194 NA non-coding upstream 14825 24697907 ~ 24710380 (-)
G31199 NA non-coding upstream 27702 24710784 ~ 24711425 (-)
G31200 NA non-coding upstream 28505 24711587 ~ 24711794 (-)
G31201 NA non-coding upstream 31370 24714452 ~ 24714777 (-)
G31134 NA other downstream 55822 24304096 ~ 24497596 (-)
G31120 NA other downstream 58240 24306501 ~ 24495178 (-)
LOC122342340 NA other downstream 226155 24323970 ~ 24327263 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 442745 24110224 ~ 24110673 (-)
G31050 NA other downstream 781650 23745486 ~ 23771768 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 70974 24754056 ~ 24760786 (-)
G31314 NA other upstream 875958 25559040 ~ 25561198 (-)
G31394 NA other upstream 1490617 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 1641397 26324479 ~ 26325236 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 2683330 27366412 ~ 27367649 (-)

Expression


Co-expression Network