G31228


Basic Information

Item Value
gene id G31228
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25315179 ~ 25315553 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46139
gatgtttgataggagccagtgcagtgttgacagaaccgggctaatatgatcatacttcctagttctagtaaggactctagctgctgtgttttggactagctgaagtttgtttattaagcgtgcagaacaaccacccaataaagcattgcaataatctaaccttgaggtcataaacgcatgaattaatatttctgcattagaggtcgaaagcataggtcgtaatttagatatatttttaagatggaaaaacgcagttttacagatgctagaaacatgattttcaaaggaaagattgcggtcaaacagcacacctaggttcctaactgatgatgaagaattaacagagcagccatcaagtgataggctgtgttctag

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU46139 True 375 lncRNA 0.39 1 25315179 25315553

Neighbor

gene id symbol gene type direction distance location
LOC122342420 LOC107667978,LOC107563545 coding upstream 532838 24770632 ~ 24782341 (+)
LOC122342991 LOC107685875,LOC107570416,LOC107671223,LOC107749047,LOC107728228,LOC107569032 coding upstream 627199 24679922 ~ 24687980 (+)
LOC122343104 NA coding upstream 643028 24667706 ~ 24672151 (+)
LOC122343093 NA coding upstream 649603 24661829 ~ 24665576 (+)
LOC122343105 NA coding upstream 661964 24648967 ~ 24653215 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding downstream 201843 25517396 ~ 25553833 (+)
l1camb LOC107661992,LOC107746188,LOC107598812,LOC107568828 coding downstream 257524 25573077 ~ 25609845 (+)
lsm14b lsm14b,LOC107748998,LOC107569639 coding downstream 315808 25631361 ~ 25634808 (+)
ogfr ogfr,LOC107706812,LOC107690085,LOC107713566,LOC107677637,LOC107598801 coding downstream 388278 25703831 ~ 25709637 (+)
col9a3 col9a3,LOC107713563,LOC107598802,LOC107680173,LOC107719903,LOC107677638,LOC106571930 coding downstream 396109 25711662 ~ 25728651 (+)
G31226 NA non-coding upstream 583 25314223 ~ 25314596 (+)
G31223 NA non-coding upstream 325905 24988867 ~ 24989274 (+)
G30877 NA non-coding upstream 600181 24714697 ~ 24714998 (+)
G30812 NA non-coding upstream 828292 24456022 ~ 24486887 (+)
LOC122343172 NA non-coding upstream 895611 24417843 ~ 24419568 (+)
G31380 NA non-coding downstream 471827 25787380 ~ 25787901 (+)
G31388 NA non-coding downstream 501478 25817031 ~ 25817564 (+)
LOC122342592 NA non-coding downstream 600836 25916389 ~ 25917199 (+)
trnas-aga_27 NA non-coding downstream 617628 25933181 ~ 25933262 (+)
trnas-uga_25 NA non-coding downstream 620605 25936158 ~ 25936240 (+)
LOC122342408 NA other upstream 547627 24743848 ~ 24767552 (+)
G30882 NA other upstream 586732 24721424 ~ 24728447 (+)
LOC122343086 NA other upstream 640767 24672891 ~ 24674412 (+)
LOC122343125 NA other upstream 668578 24639089 ~ 24646601 (+)
LOC122343159 NA other upstream 676525 24636352 ~ 24638654 (+)
LOC122342771 ss18l1,LOC102784650 other downstream 319489 25635042 ~ 25688230 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other downstream 378249 25693802 ~ 25695381 (+)
G31384 NA other downstream 497078 25812631 ~ 25813625 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1981983 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 2041259 27356812 ~ 27358163 (+)

Expression


Co-expression Network