G31380


Basic Information

Item Value
gene id G31380
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25787380 ~ 25787901 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46335
agattactagctgctttggaagcacagtaatctcgacagacgaattctgtcgaccaatagtctgggacattggtttgtcgacaaaAAGTTCTTCTAAGCgcgcagggtatgaatggtatgaatgtgttgtatgaaagtcattgtgaatcactaggatttacggtgaataaggtggttgttgtggtttaggaataacacaacTGATATTTCTCCCTACTAGGAAGGGAGTTgtgttattcaaacataaaaattatattgggtttgagtcaaaattgaaaagttggtttgttcagacggctgtatccgcagacaaattagtgtctgtagaagtttggtgcagtggacgatctgatcagacgtgtgactaatcgttgactcttaccaaaaagcaaatatgggcgcaggaaaaagtaaattgacgggagatccaaagtttatgcatacatattcggcagacagtgtgcgatatctcaatgagtggaataaaaaatatgatttcagtggtaaattagtcaaaaggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46335 True 522 lncRNA 0.39 1 25787380 25787901

Neighbor

gene id symbol gene type direction distance location
col9a3 col9a3,LOC107713563,LOC107598802,LOC107680173,LOC107719903,LOC107677638,LOC106571930 coding upstream 58729 25711662 ~ 25728651 (+)
ogfr ogfr,LOC107706812,LOC107690085,LOC107713566,LOC107677637,LOC107598801 coding upstream 77743 25703831 ~ 25709637 (+)
lsm14b lsm14b,LOC107748998,LOC107569639 coding upstream 152572 25631361 ~ 25634808 (+)
l1camb LOC107661992,LOC107746188,LOC107598812,LOC107568828 coding upstream 177535 25573077 ~ 25609845 (+)
zmp:0000000926 LOC107754864,LOC107661991,LOC107568831,LOC104958731 coding upstream 233547 25517396 ~ 25553833 (+)
trnas-uga NA coding downstream 37210 25825111 ~ 25825192 (+)
trnak-uuu_1 NA coding downstream 38723 25826624 ~ 25826696 (+)
trnas-uga_1 NA coding downstream 39260 25827161 ~ 25827242 (+)
trnak-uuu_2 NA coding downstream 39451 25827352 ~ 25827424 (+)
trnas-aga_2 NA coding downstream 40255 25828156 ~ 25828236 (+)
G31228 NA non-coding upstream 471827 25315179 ~ 25315553 (+)
G31226 NA non-coding upstream 472784 25314223 ~ 25314596 (+)
G31223 NA non-coding upstream 798106 24988867 ~ 24989274 (+)
G30877 NA non-coding upstream 1072382 24714697 ~ 24714998 (+)
G30812 NA non-coding upstream 1300493 24456022 ~ 24486887 (+)
G31388 NA non-coding downstream 29130 25817031 ~ 25817564 (+)
LOC122342592 NA non-coding downstream 128488 25916389 ~ 25917199 (+)
trnas-aga_27 NA non-coding downstream 145280 25933181 ~ 25933262 (+)
trnas-uga_25 NA non-coding downstream 148257 25936158 ~ 25936240 (+)
trnak-uuu_26 NA non-coding downstream 149746 25937647 ~ 25937719 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 91999 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 99150 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1019828 24743848 ~ 24767552 (+)
G30882 NA other upstream 1058933 24721424 ~ 24728447 (+)
LOC122343086 NA other upstream 1112968 24672891 ~ 24674412 (+)
G31384 NA other downstream 24730 25812631 ~ 25813625 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1509635 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1568911 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1572942 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2419057 28206958 ~ 28216248 (+)

Expression


Co-expression Network