G31438


Basic Information

Item Value
gene id G31438
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27233096 ~ 27233432 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46401
ACAAAACCCTGTAAGTTTTGCTTTGCGAGCAGGACATACAGCTGCTTTGTGGCCCGGCTGCTGGCAGTAAAAGCAAAGCAAGTCTTTGGTCGTTGACTTTGGACCTTGTGTATTGTCAGATATTGTCAGACCCCTTACACTCCCCAAGCTATGAGAAGCACCACGCACAGTACCTTTAGATGGTTGAGTACGAGGACCGCCATGAGCATTCAGGTACTGCTGAGCCAACCTTGCTGCCGCCAGTCCTGACCTTGGCTCATGCTCTCTCACCCAGGTGCGTGCATCGAAGGGAAGCACCCGAAGAAGCTGCTCCAGGACGATGGCCTCACCGATCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46401 True 337 lncRNA 0.53 1 27233096 27233432

Neighbor

gene id symbol gene type direction distance location
trnav-uac_5 NA coding upstream 9110 27223914 ~ 27223986 (+)
LOC122342370 NA coding upstream 22494 27207736 ~ 27210602 (+)
trnav-aac_9 NA coding upstream 91472 27141552 ~ 27141624 (+)
trnav-cac_2 NA coding upstream 93970 27139054 ~ 27139126 (+)
trnav-aac_8 NA coding upstream 95188 27137836 ~ 27137908 (+)
LOC122342913 LOC107752534,LOC107665115,LOC107549827 coding downstream 186111 27419543 ~ 27436028 (+)
tcf19l LOC107752517,LOC107665168,LOC107549845,LOC107666307,LOC107753767,LOC107554348 coding downstream 203001 27436433 ~ 27442200 (+)
pvrl2l pvrl2l,LOC107549846,LOC107752518,LOC107665153,LOC107753776,LOC107554349,LOC107666334 coding downstream 227049 27460481 ~ 27599258 (+)
atp1a3a atp1a3a,LOC107665151,LOC107753791,LOC108433742,LOC107666333,LOC107549859,LOC102779181 coding downstream 389240 27622672 ~ 27649545 (+)
LOC122342440 LOC107753802,LOC107554351,LOC107666349,LOC100537384 coding downstream 431673 27665105 ~ 27711406 (+)
G31429 NA non-coding upstream 34830 27197887 ~ 27198266 (+)
G31428 LOC107574244,LOC107838241 non-coding upstream 148389 27084317 ~ 27084707 (+)
trnay-gua_43 NA non-coding upstream 232241 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 232805 27000219 ~ 27000291 (+)
trnay-gua_42 NA non-coding upstream 235224 26997786 ~ 26997872 (+)
G31443 NA non-coding downstream 130156 27363588 ~ 27410595 (+)
LOC122343300 NA non-coding downstream 374355 27607787 ~ 27619661 (+)
G31520 NA non-coding downstream 478814 27712246 ~ 27713190 (+)
G31540 NA non-coding downstream 564541 27797973 ~ 27798209 (+)
G31543 NA non-coding downstream 589974 27823406 ~ 27823705 (+)
G31384 NA other upstream 1419471 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1537715 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1544866 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2465544 24743848 ~ 24767552 (+)
G30882 NA other upstream 2504649 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 64104 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 123380 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 127411 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 973526 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 985301 28218733 ~ 28221417 (+)

Expression


Co-expression Network