G31443


Basic Information

Item Value
gene id G31443
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27363588 ~ 27410595 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46427
tttttttttttttttttttttttttttttttttttTTTAGTTAAACGTTTATTTTAGTAGGGGAGGTTGCTTTAAGGCATCATAAGCACAAGTAGACAATACAGTGGTTTGGTTTGTTAGTCTTTGCATGCATGCTGAAAAAGATTAAATtgtttaaacagttaaaatagGTGATTTGTTTACTGTATTAGTATAGATACTTTGTATAGAGTAGAAAAAGCATCTGACAAATAACATAGCAGCCATAGCCTACACAGCGTAACAGCAGGGCTACCTACTGACCTGACATACTAAATCTATCCAAACATCACTCTTTAGGTCTAACTAATACCTGCCCACCAATAAGAAGTGAACAGGCCTTTCTATTTATCCTCAAAGGGATGCATcccattttaaaagttttagtaatCATTCATCAAACCATTAAACATGAAGATcgtaaaaacaaatacaaaagtgACAAATGTGTGGTTAGTTCAGTTTGCATTACACACAATATCTATGAAGTACCATAACAGTGTTTATACATCATGTTAATaacaattcaatttaaattatgtCATTGGCGCTTATGAATACATGCTTATATATCTAATGCTgacaattaaacacatttgaaaaaaagaacattcattataattattgtgtaatcaaagaaaaatgtagTGTAACCAGTAGTAAATACTGATGATTATGAACAAAACTTATATGAGAACTCcctaaaatcctttttttttttaaattaagcacAATTCAGAAATCTTAACATGCCTTATTTCAggaacagaacaaaacagaagTTTAAATAATTGCAGACTTCTGCATAACACGTGAAAACATCTTGATTGTTCATTTGAATACACACTTAAACGCACATACGAGGATCATATTTGAAATGATCTACAGAACATAGTACCTTTTGAACTCCTACACAATTATGTCCAACTAATATAGCTATAATGTACTGCTGAGGTAAAGTGAAAATATATCCTATTCAACCcacacaaataaatttaaaaaaaagcaatagttCTTTACAAATTTTTCCCTTCACGCTACTTTGGCTTCCAAAAGCTTACCTCATGGAAAGCtcaaacataacaaaatgcTCTTAGTGCACTACCAGCATTGAAAAGTGGTCTataagaaaaagtaaaagtaacatttcaaaatgtcagaAGTTGTAGTGTCTGATGGCATTCAACAGATCCTTGGACTTCACTGTCTTCTTatgattgcattaaaaatataaagaacagCATTCTTCCCTggagttttagattaaaatgcaCTTTGGGTTTTGGCAGCATGGCAAGACGGACAGGAAGTGTAAGTTCGAGAGAGAAACATGGGAAAGGGGAAACCAAAGAGATGCAGGGTGGAAGACAAGAAAGATAAAAGGAGAAGAAATAAATCGTCAAAGATAGAGAAGAGGGTCGTTTAAATGATAAAGAAcctgataaaaaaaagtgagagtACGAGAAAACTAGATGAATGATGCATGCATACAGAAACGATAGATGATTTCTTCAACCAGTCTGGG
>TU46428
ttttttttttttttttttaCAGTTTAGTTAAACGTTTATTTTAGTAGGGGAGGTTGCTTTAAGGCATCATAAGCACAAGTAGACAATACAGTGGTTTGGTTTGTTAGTCTTTGCATGCATGCTGAAAAAGATTAAATtgtttaaacagttaaaatagGTGATTTGTTTACTGTATTAGTATAGATACTTTGTATAGAGTAGAAAAAGCATCTGACAAATAACATAGCAGCCATAGCCTACACAGCGTAACAGCAGGGCTACCTACTGACCTGACATACTAAATCTATCCAAACATCACTCTTTAGGTCTAACTAATACCTGCCCACCAATAAGAAGTGAACAGGCCTTTCTATTTATCCTCAAAGGGATGCATcccattttaaaagttttagtaatCATTCATCAAACCATTAAACATGAAGATcgtaaaaacaaatacaaaagtgACAAATGTGTGGTTAGTTCAGTTTGCATTACACACAATATCTATGAAGTACCATAACAGTGTTTATACATCATGTTAATaacaattcaatttaaattatgtCATTGGCGCTTATGAATACATGCTTATATATCTAATGCTgacaattaaacacatttgaaaaaaagaacattcattataattattgtgtaatcaaagaaaaatgtagTGTAACCAGTAGTAAATACTGATGATTATGAACAAAACTTATATGAGAACTCcctaaaatcctttttttttttaaattaagcacAATTCAGAAATCTTAACATGCCTTATTTCAggaacagaacaaaacagaagTTTAAATAATTGCAGACTTCTGCATAACACGTGAAAACATCTTGATTGTTCATTTGAATACACACTTAAACGCACATACGAGGATCATATTTGAAATGATCTACAGAACATAGTACCTTTTGAACTCCTACACAATTATGTCCAACTAATATAGCTATAATGTACTGCTGAGGTAAAGTGAAAATATATCCTATTCAACCcacacaaataaatttaaaaaaaagcaatagttCTTTACAAATTTTTCCCTTCACGCTACTTTGGCTTCCAAAAGCTTACCTCATGGAAAGCtcaaacataacaaaatgcTCTTAGTGCACTACCAGCATTGAAAAGTGGTCTataagaaaaagtaaaagtaacatttcaaaatgtcagaAGTTGTAGTGTCTGATGGCATTCAACAGATCCTTGGACTTCACTGTCTTCTTatgattgcattaaaaatataaagaacagCATTCTTCCCTggagttttagattaaaatgcaCTTTGGGTTTTGGCAGCATGGCAAGACGGACAGGAAGTGTAAGTTCGAGAGAGAAACATGGGAAAGGGGAAACCAAAGAGATGCAGGGTGGAAGACAAGAAAGATAAAAGGAGAAGAAATAAATCGTCAAAGATAGAGAAGAGGGTCGTTTAAATGATAAAGAAcctgataaaaaaaagtgagagtACGAGAAAACTAGATGAATGATGCATGCATACAGAAACGATAGATGATTTCTTCAACCAGTCTGGG

Function

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0099528 G protein-coupled neurotransmitter receptor activity molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU46427 True 1543 lncRNA 0.32 2 27407961 27410595
TU46428 False 1530 lncRNA 0.33 2 27363588 27410595

Neighbor

gene id symbol gene type direction distance location
trnav-uac_5 NA coding upstream 139602 27223914 ~ 27223986 (+)
LOC122342370 NA coding upstream 152986 27207736 ~ 27210602 (+)
trnav-aac_9 NA coding upstream 221964 27141552 ~ 27141624 (+)
trnav-cac_2 NA coding upstream 224462 27139054 ~ 27139126 (+)
trnav-aac_8 NA coding upstream 225680 27137836 ~ 27137908 (+)
LOC122342913 LOC107752534,LOC107665115,LOC107549827 coding downstream 8948 27419543 ~ 27436028 (+)
tcf19l LOC107752517,LOC107665168,LOC107549845,LOC107666307,LOC107753767,LOC107554348 coding downstream 25838 27436433 ~ 27442200 (+)
pvrl2l pvrl2l,LOC107549846,LOC107752518,LOC107665153,LOC107753776,LOC107554349,LOC107666334 coding downstream 49886 27460481 ~ 27599258 (+)
atp1a3a atp1a3a,LOC107665151,LOC107753791,LOC108433742,LOC107666333,LOC107549859,LOC102779181 coding downstream 212077 27622672 ~ 27649545 (+)
LOC122342440 LOC107753802,LOC107554351,LOC107666349,LOC100537384 coding downstream 254510 27665105 ~ 27711406 (+)
G31438 NA non-coding upstream 130156 27233096 ~ 27233432 (+)
G31429 NA non-coding upstream 165322 27197887 ~ 27198266 (+)
G31428 LOC107574244,LOC107838241 non-coding upstream 278881 27084317 ~ 27084707 (+)
trnay-gua_43 NA non-coding upstream 362733 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 363297 27000219 ~ 27000291 (+)
LOC122343300 NA non-coding downstream 197192 27607787 ~ 27619661 (+)
G31520 NA non-coding downstream 301651 27712246 ~ 27713190 (+)
G31540 NA non-coding downstream 387378 27797973 ~ 27798209 (+)
G31543 NA non-coding downstream 412811 27823406 ~ 27823705 (+)
G31549 NA non-coding downstream 501722 27912317 ~ 27951998 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other upstream 5425 27356812 ~ 27358163 (+)
G31384 NA other upstream 1549963 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1668207 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1675358 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2596036 24743848 ~ 24767552 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 796363 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 808138 28218733 ~ 28221417 (+)
G31636 NA other downstream 874432 28285027 ~ 28320694 (+)
LOC122342379 myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840 other downstream 886707 28297302 ~ 28317582 (+)
G31649 NA other downstream 939758 28350353 ~ 28353226 (+)

Expression


Co-expression Network