G31466


Basic Information

Item Value
gene id G31466
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27373269 ~ 27392000 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46462
CAATAAAAGTtttttcaaaggttgataattgataataaaaataacgataactataaagGTTTGTTCACATATGCAGCgataactattaaaataactatataaaggttcattcacaaaaaaaggtAACAGTAACTAAATGTAGAGGCTCATTCATAAGAAATCATAGGtaataattactatataaaagTTTACAAGTTTCAATAACATAACTAACGATAAAGACCTGTTCGCAAAAATGCTGTAACAATAGctctataattacattttctatattaaaaactaCTTCTAAATGTTCACACGACAAATAAGattaattaacaatataatTCTGAACTTTTTCTCTCAGAATTAAGATATAATAAAGAACTAGTAACAGCGTAAAGAGCTGATTTAAAGTGGCAGACACCAAAAAAAGCACACACTTAAGCAGAAGTGTATCGTACTTTGATGTGGATATTAATACAGCTATCGTTATAGTTCTGGGTGTGAACGTGCCTTAAaacgtaaatacttaaaattatataagaatatcaacaattatttttttcagctgataaattattattaaaaaacactggGAGCCAATAAGAatctttttcactttaagaagctGAAGCACAGAAGCACAGAGCATGCTTGTAATAGACAGTACCTTACTGTGCTTTGGACGCTAATAAAGTTCTCATTTCTGGTGTGAACGGAAATGAAGGGCAGGGTTTGTCTGTAGTTGGATCACTAAATGAATCCACTCGCAGTGCATTTAGGCTTTACAGTACGTCCTTTACCCTTAAAAAAAACGTCCCAAGCACCCGGCATCCGACTACTGAACTCCTGCAGTGTTTTAGATGTAGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46462 True 854 lncRNA 0.32 2 27373269 27392000

Neighbor

gene id symbol gene type direction distance location
LOC122342367 NA coding downstream 504121 26865773 ~ 26869148 (-)
trnas-uga_106 NA coding downstream 645875 26727313 ~ 26727394 (-)
trnak-uuu_100 NA coding downstream 647372 26725825 ~ 26725897 (-)
trnak-uuu_99 NA coding downstream 649423 26723774 ~ 26723846 (-)
trnas-aga_108 NA coding downstream 650226 26722965 ~ 26723043 (-)
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding upstream 17088 27409088 ~ 27415650 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding upstream 554996 27946996 ~ 27951997 (-)
LOC122343310 LOC107752528,LOC107549854 coding upstream 574309 27966309 ~ 27969769 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding upstream 577910 27969910 ~ 27977175 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding upstream 589070 27981070 ~ 28037700 (-)
trnak-cuu_3 NA non-coding downstream 376134 26997065 ~ 26997135 (-)
trnae-cuc_35 NA non-coding downstream 379458 26993740 ~ 26993811 (-)
G31426 NA non-coding downstream 384315 26988587 ~ 26988954 (-)
trnae-cuc_34 NA non-coding downstream 388710 26984490 ~ 26984559 (-)
trnae-cuc_33 NA non-coding downstream 391545 26981653 ~ 26981724 (-)
G31472 LOC107752514,LOC105892077,LOC107665159 non-coding upstream 6769 27398769 ~ 27400876 (-)
G31481 NA non-coding upstream 37130 27429130 ~ 27438241 (-)
G31484 tcf19l,LOC107753767 non-coding upstream 48666 27440666 ~ 27442686 (-)
G31507 NA non-coding upstream 165605 27557605 ~ 27649545 (-)
G31496 NA non-coding upstream 202993 27594993 ~ 27599290 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other downstream 5620 27366412 ~ 27367649 (-)
G31400 LOC102197881 other downstream 1048033 26324479 ~ 26325236 (-)
G31394 NA other downstream 1198020 26173699 ~ 26175249 (-)
G31314 NA other downstream 1812071 25559040 ~ 25561198 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other downstream 2612483 24754056 ~ 24760786 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other upstream 147355 27539355 ~ 27615941 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other upstream 250692 27642692 ~ 27644732 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other upstream 673297 28065297 ~ 28067762 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other upstream 728247 28120247 ~ 28130380 (-)
LOC122342472 znf384l,LOC107665159,LOC107752514 other upstream 789566 28181566 ~ 28187257 (-)

Expression


Co-expression Network