LOC122342454 (kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333)


Basic Information

Item Value
gene id LOC122342454
gene name kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27383753 ~ 27389398 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46464
AACGTTTGTTGCTTCGCTTATGGCCAAACCGGCAGCGGGAAGACCTTCACCATGGAGGGGGGAGACCTGGAGGACCTGTGGGGAGTCATTCCACGTGCTGTCCAGCAGATCTTCAAGTCTGCCAAAGCACTCCAAGAGCAAGGCTGGCAGTACACCTTCACGGCCAGCTTTGTGGAGATCTACAATGAGACTCTTCGAGATCTTCTCTACAAAGGAAAACCAAACAAGAGACCTGAGCATGAGATCAGGAAGGTCTCCAATAATGAGATCACGGTTACCAACCTGACCTATCAGAAAGTCAACAATGAAGATGAGGTGCAGAACTTGATCATGCTGGCGAACCAGAACCGGTCCACAGCCCGCACAGGCATGA
>XM_043236245.1
CCAATGAGAGATCAGCGGGTAAAGCCGTCACACGCAGAATTTCAATTTGAAATTCAAACGGCTAGGAGAGATTTTTGCGCCgggctgtgtttttatAGGAATTAAACGGGATCCATGAACAAAGAGAATACATTATCCCGTCTCCCAGTTATGTCTGGGAAACGGGCTCACACCAACAGTACGGATGGGGAGCAACAGCAGCCTGCGCAGAAAAAAATGCGTAAGGTAGACACAGAACCACCTCAGAGGTTCAGACCTGCGGCTAGTGTTGTGCCCCCAAGACGCCCGGTGGCAGTCAAAGCTCCTGccaaACCTCTTCGTCCAACTGGAGCCGCGACAGTGGCTGCTGCTCCCGCAAGAGGTGACCAGAGAAAACCTGTTGTAGCAGTGTCTAAAGCAGCTGCAGGTTTAGGTGCGTCACGGAGGCCGGGATGGGACCTGAAGGGCAAAGTGAGTGACATGGAGGTCAAAGTCCAGAGCTACCAGggcaaaataaaatctgtaaaccAGGAAAATGAATACCTGAAAGACTCCATAAACAAAGCCCAAAGGCATAAGGTGGAAATCGAAGAAGAAAACAGTGGTCTCAAAAGGCGCCTCAGGAATTGTGAAGAGGAGCTGGAAAAGCTGGCTACTGTGAAAGATGACCTGGCGCAAACCTCTACAGAGAGAGATGGCCTTAAAAAAGACCTCAGCAAGCTAACCCAGGAGCATAAGGTTTTGGAAGGACTCAGGGATCATTTGGAGACTGAGCTCCGCAATATACAGACTCAGCTAGCCATTCAGACGTCTACGCTGAGGCAGTGTCAGGACAGTTTGAAGGAGAGCCAAGAACGGGTCAGGAACCTTGAGGAGACGGTGGCCCATCAAAGAGAAGAGCTCCACCTCGGAGAAATGGAGCGAAGGAAGCTCCACAACACCATTCAAGAGCTCAAAGGCAACATCCGAGTGTTTTGTAGGGTCCGCCCTCTGCTGTCTGGCAATCAATCTGATATTCTGCACATCCAGCTGCCGGCCCATGACAACAAGGCTCTCACACTTGCCAAAACAGAAGAGTCTCACACAGGGCGCACCGCTGACACTCAGAAGAGCTATAACTTCAGTTTCGACCGTGTGTTAGGGCGCGCGACTCTCAGTGTGAGGTTTTGAAGAGATCTCCTGCTGGTGCAGTCTGCTCTGGATGGGTACAACGTTTGTTGCTTCGCTTATGGCCAAACCGGCAGCGGGAAGACCTTCACCATGGAGGGGGGAGACCTGGAGGACCTGTGGGGAGTCATTCCACGTGCTGTCCAGCAGATCTTCAAGTCTGCCAAAGCACTCCAAGAGCAAGGCTGGCAGTACACCTTCACGGCCAGCTTTGTGGAGATCTACAATGAGACTCTTCGAGATCTTCTCTACAAAGGAAAACCAAACAAGAGACCTGAGCATGAGATCAGGAAGGTCTCCAATAATGAGATCACGGTTACCAACCTGACCTATCAGAAAGTCAACAATGAAGATGAGGTGCAGAACTTGATCATGCTGGCGAACCAGAACCGGTCCACAGCCCGCACAGGCATGAGCGATCACTCCTCACGCTCTCACTCTGTGTTCCAGCTAGACATAGAGGGGCAGAACTCTGATCGAGACACCAAGTGCAAGTCCGTGCTGTGTCTGGTGGACTTGGCCGGTAGTGAGCGAGTGCAGAAGAGTCAGTCTCAAGGAGAGCGCTTCAAGGAGATGACCGCCATCAACTCTTCCCTCACCAACCTGGGAATTGTGATCGCCGCTTTGGCCAACAAGGAGAGCTTTATTCCCTACCGTAACTCAAAGCTCACCTACCTGCTCCAGAACTGCCTCGGAGGCAACAGCAAAACTCTGATGTTTGTGAACATAGCTCCTGAGGAGGAGAGCTTCAGTGAGTCGCTGAATTCTCTGCGCTCCGCCAGCAAGGTGAACGACTGTGTGATCGGAACAGCCTCCGCTAATCGGAAGTAGTTTAGCCGTCATTTCCACCGTGgccgtttttaaaaaaaagcttttaatttctTGAATGTCACCTTTTTATCCTCATCTCTCCTGTATTggctacatttttatatttctgtgatgcaatttTAATGTTCTGTATTACTAGCAAAAccttattaatgttttaacagCCGCTGAATGCATATTTCACTGCATCTTGGAAGGGGATCAATAAAATTTCTATTTTGGCATGTAA

Function

symbol description
kifc1 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement and mitotic spindle assembly. Predicted to be part of kinesin complex. Predicted to be active in microtubule cytoskeleton and nucleus. Orthologous to human KIFC1 (kinesin family member C1).

NR:

description
PREDICTED: carboxy-terminal kinesin 2-like isoform X1

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10405 KIFC1; kinesin family member C1

RNA

RNA id representative length rna type GC content exon number start site end site
TU46464 False 373 TUCP 0.51 3 27385805 27386418
XM_043236245.1 True 2206 mRNA 0.50 17 27383753 27389398

Neighbor

gene id symbol gene type direction distance location
LOC122342367 NA coding downstream 514605 26865773 ~ 26869148 (-)
trnas-uga_106 NA coding downstream 656359 26727313 ~ 26727394 (-)
trnak-uuu_100 NA coding downstream 657856 26725825 ~ 26725897 (-)
trnak-uuu_99 NA coding downstream 659907 26723774 ~ 26723846 (-)
trnas-aga_108 NA coding downstream 660710 26722965 ~ 26723043 (-)
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding upstream 19690 27409088 ~ 27415650 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding upstream 557598 27946996 ~ 27951997 (-)
LOC122343310 LOC107752528,LOC107549854 coding upstream 576911 27966309 ~ 27969769 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding upstream 580512 27969910 ~ 27977175 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding upstream 591672 27981070 ~ 28037700 (-)
trnak-cuu_3 NA non-coding downstream 386618 26997065 ~ 26997135 (-)
trnae-cuc_35 NA non-coding downstream 389942 26993740 ~ 26993811 (-)
G31426 NA non-coding downstream 394799 26988587 ~ 26988954 (-)
trnae-cuc_34 NA non-coding downstream 399194 26984490 ~ 26984559 (-)
trnae-cuc_33 NA non-coding downstream 402029 26981653 ~ 26981724 (-)
G31472 LOC107752514,LOC105892077,LOC107665159 non-coding upstream 9371 27398769 ~ 27400876 (-)
G31481 NA non-coding upstream 39732 27429130 ~ 27438241 (-)
G31484 tcf19l,LOC107753767 non-coding upstream 51268 27440666 ~ 27442686 (-)
G31507 NA non-coding upstream 168207 27557605 ~ 27649545 (-)
G31496 NA non-coding upstream 205595 27594993 ~ 27599290 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other downstream 926 27379059 ~ 27382827 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other downstream 16104 27366412 ~ 27367649 (-)
G31400 LOC102197881 other downstream 1058517 26324479 ~ 26325236 (-)
G31394 NA other downstream 1208504 26173699 ~ 26175249 (-)
G31314 NA other downstream 1822555 25559040 ~ 25561198 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other upstream 149957 27539355 ~ 27615941 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other upstream 253294 27642692 ~ 27644732 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other upstream 675899 28065297 ~ 28067762 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other upstream 730849 28120247 ~ 28130380 (-)
LOC122342472 znf384l,LOC107665159,LOC107752514 other upstream 792168 28181566 ~ 28187257 (-)

Expression


Co-expression Network