G31484 (tcf19l,LOC107753767)


Basic Information

Item Value
gene id G31484
gene name tcf19l,LOC107753767
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27440666 ~ 27442686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46488
gagagagagagagagagagagagagaaaaagtaaaATGGTTTGATAGCAGGGCTTTGCCTGAACCAGGAGCGGGCCGTAGATACATTTTCTAAACACGCCCAAGAATAAAGCATCAGTGGTGTGTGTCTTAAGACAAGTACTGACGTGTTTTAAGATCGGTCAGTACAGGTTTCTTTCATTCGAAGCATTTTAGAGTAAAACTAGGCTTAAACCTTGTCCGTGAAACCAGGAGACTAAGAACGGCTTCAAAACTTGAAACATGGACATCtcaaaccatttaaaataataaaggatgTTTAAACGTAATAAATGCATGACGGAGAATGAATGCAGAATCTCGGTGGATCATCTGAGAGCGTGAAGACGGACACCGCTAGACGGGGGTTAGTCGAGGAAGCGTCTTAATTACAGGAAACAACCGTGCGCGCGGACCAAAGGTCAAGCTGGAGAGTTCAAGATACGAAAACGCCATCACCTTTATaaaggagtttgtttcttcttttaaaacggatttggagaaagcgaagctgaagtgaatgggtgccgtcggattTAGAGTCCAagcggctgataaaaacatcccaagTAAGCCACACctctccagtccatcaatcaatgcgttttcaaaagttttcacttGGAGTATGCAAGTCCTGTTTTGAATCGTCTCGTCTGAATGCAGGGATCGAACACTATTTATGAGCAAAAGCAGGCCAGTTCAGAATGAAcatgttggtggattttgatgtgagcgGACTACAGAAGATAGATGAAGTGTGATCACGGGACTAATATTTTGCCCGGAAGCAgcggtttaaagttaaaacgcCTCAATGacagatttgtttcttacagacACACAGCTTTTGTCCTTCACAGGATGTTAACTGATTGGAGCGGCGCGGCTCatcggctgtttggactctcattctgacggcacccattcactgctgaagGACAAGGAAAAGTCTCTGAAtgtgttctgatgaagaaacagccCGAGGGGTTCACTGACCACAGAAAGgTTTCATTGGAGTATATTGAATAGATCTGTATACCGGAAGCAGTCAGAAAGCATCCGGTGTTTGGACGCTCTTGTGCAAATCCAACACCCTCCCTGCATCCGGACCAGTTCAAAGCGGCTGGCCGTCAGCGGTGTCTGGAGCGATGGCAGCCGCAGCGGAAGTCGGCGCTGGGGTCGAGGAGCAGCGAGTCTCGGTTGTGGTTGTGCGGCAAGCAGTCGAGGTGATACCAGGCGTCGCAGTCGTCACACTGGATCCACTGCACCGTGTCCTGCTGCGGGAGACGACAGCGAGACGCCGCGCACGGCTCCACGGCCTGACACGCAGGCACGcactcatcttcatcttctgaGGACgacgaggacgaggaggaggacgaggacgacgaggaagagctggaggaggaggatgaagagggaGACGGCAGGGAAGGCTGAGGCAGAGGGTGCTTTCTGG

Function

symbol description
tcf19l Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human TCF19 (transcription factor 19).

NR:

description
transcription factor 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46488 True 1479 lncRNA 0.49 3 27440666 27442686

Neighbor

gene id symbol gene type direction distance location
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding downstream 25016 27409088 ~ 27415650 (-)
LOC122342367 NA coding downstream 571518 26865773 ~ 26869148 (-)
trnas-uga_106 NA coding downstream 713272 26727313 ~ 26727394 (-)
trnak-uuu_100 NA coding downstream 714769 26725825 ~ 26725897 (-)
trnak-uuu_99 NA coding downstream 716820 26723774 ~ 26723846 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding upstream 504310 27946996 ~ 27951997 (-)
LOC122343310 LOC107752528,LOC107549854 coding upstream 523623 27966309 ~ 27969769 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding upstream 527224 27969910 ~ 27977175 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding upstream 538384 27981070 ~ 28037700 (-)
LOC122342469 si:dkeyp-113d7.1,LOC107727714,LOC107549870,LOC107563030,LOC107665141,LOC103032369 coding upstream 670816 28113502 ~ 28118332 (-)
G31481 NA non-coding downstream 2425 27429130 ~ 27438241 (-)
G31462 NA non-coding downstream 34585 27360904 ~ 27406081 (-)
G31472 LOC107752514,LOC105892077,LOC107665159 non-coding downstream 39790 27398769 ~ 27400876 (-)
G31466 NA non-coding downstream 48666 27373269 ~ 27392000 (-)
trnak-cuu_3 NA non-coding downstream 443531 26997065 ~ 26997135 (-)
G31507 NA non-coding upstream 114919 27557605 ~ 27649545 (-)
G31496 NA non-coding upstream 152307 27594993 ~ 27599290 (-)
LOC122343301 NA non-coding upstream 169041 27611727 ~ 27615408 (-)
G31517 NA non-coding upstream 202340 27645026 ~ 27646425 (-)
G31692 NA non-coding upstream 377338 27820024 ~ 27820253 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other downstream 51268 27383753 ~ 27389398 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other downstream 57839 27379059 ~ 27382827 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other downstream 73017 27366412 ~ 27367649 (-)
G31400 LOC102197881 other downstream 1115430 26324479 ~ 26325236 (-)
G31394 NA other downstream 1265417 26173699 ~ 26175249 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other upstream 96669 27539355 ~ 27615941 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other upstream 200006 27642692 ~ 27644732 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other upstream 622611 28065297 ~ 28067762 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other upstream 677561 28120247 ~ 28130380 (-)
LOC122342472 znf384l,LOC107665159,LOC107752514 other upstream 738880 28181566 ~ 28187257 (-)

Expression


Co-expression Network