G31557


Basic Information

Item Value
gene id G31557
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27925447 ~ 27979133 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46595
tgtgtgtgtttttttTTCatataattcagtttatttatttgaaaacaaacaaaagacacagTCAAACTAAAATGCtcagtaaaaatgcataatcACTGCGACTTCCCGTTGACATTCcgtgcatgtttttgtgtgtgttttttttttctctcgcagGTGGGCatgttgaaattatttattctaCGATGACAGCATCATCAGGAGTGCAATTATCACCGAAAACGCAGAAGAATCACAAATCTCTCCGTGACATGAAAGATCCCACGTAACTAAACAAATGATCCCGTTTCTCAGACTGCAGCAGATCCGCCTAAAATGTAAAGGAACGGCTGACTCGAGAATCAATATGTGCTGAAAAACGCGCGCCACCCTCAAACCATCCCAAGATGCAGGCGAGCTCGTTTCCTCATCGGAAGACGTTCAGCATCGCTTGCTCGCcgagtgaacgggtgccgtcagaaacaCAGCAATGCATGTAAATCCAGTCCGTTTCATCTcgtgatgcaaaaaaaaaaaaatctctttaaagAAACGAATCCACCATTAAAGCATCAACTTTAAAATGTCGCTTTTGGACAAAATACGAGCCCGTGATCCATAAAAACGCCTCCTTCTTTGACTACCCCTTGTTGTCCTCCCGTATCCAAACAACGTAAAATGACGCTTGATCTTCGcacatttctctcctgattcagacaagaccGCTTTCCACCGGAGGAAACGACATTAAGGATCACgcacttttattttagctgcCAGCATTAGACTTAGGTCGATGCCTTGGTGGATTCGTTTTTAGCAAACTCGCAGGTTTTCACTTCCTCGGACCTTAATTGCTGGAGCTGGATTATTTCTCAGCCGTTTttttggcggcaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46595 True 878 lncRNA 0.43 2 27925447 27979133

Neighbor

gene id symbol gene type direction distance location
si:ch211-264f5.6 LOC107549843,LOC107665174,LOC107752524,LOC107549858 coding upstream 2238 27909429 ~ 27923209 (+)
LOC122343426 grik5,LOC107549838,LOC107752523,LOC100331381,LOC107666346,LOC108433750,LOC105029761 coding upstream 20579 27832840 ~ 27904868 (+)
LOC122342539 si:ch73-42k18.1,LOC553308 coding upstream 105200 27799111 ~ 27820247 (+)
gsk3aa gsk3aa,LOC107549848,LOC107665161,LOC105892068 coding upstream 132575 27779450 ~ 27792872 (+)
cica cica,LOC107554354,LOC107752539,LOC107753834,LOC107665116 coding upstream 146661 27756525 ~ 27778786 (+)
krt91 krt91,cki,LOC107727715,LOC107563033,LOC107753907,LOC107666324,LOC107549866,LOC107753917 coding downstream 101726 28080859 ~ 28082970 (+)
LOC122342444 krt1-19d,LOC107665143,LOC107666326,LOC107753925,LOC107563035 coding downstream 127484 28106617 ~ 28110047 (+)
LOC122342376 LOC107694127,LOC107717944,LOC107590657,LOC107752637,LOC107552269 coding downstream 218103 28197236 ~ 28201011 (+)
dhdh.1 LOC107665437,LOC107668471,LOC107709394,LOC107553352 coding downstream 375297 28354430 ~ 28360242 (+)
dhdh.2 zgc:101723,LOC107665090,LOC107712874 coding downstream 381813 28360946 ~ 28367478 (+)
G31543 NA non-coding upstream 101742 27823406 ~ 27823705 (+)
G31540 NA non-coding upstream 127238 27797973 ~ 27798209 (+)
G31520 NA non-coding upstream 212257 27712246 ~ 27713190 (+)
LOC122343300 NA non-coding upstream 305786 27607787 ~ 27619661 (+)
G31443 NA non-coding upstream 514852 27363588 ~ 27410595 (+)
G31596 NA non-coding downstream 141119 28120252 ~ 28121159 (+)
G31603 NA non-coding downstream 165307 28144440 ~ 28162265 (+)
G31621 NA non-coding downstream 247267 28226400 ~ 28228301 (+)
G31631 myo7aa,LOC107660700,LOC106612882,LOC106581013 non-coding downstream 290969 28270102 ~ 28270584 (+)
G31551 LOC107709388,LOC107595343,LOC107712845,LOC107668482,LOC107553360 non-coding downstream 393252 28372385 ~ 28375787 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other upstream 519359 27360843 ~ 27406088 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other upstream 554251 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other upstream 567284 27356812 ~ 27358163 (+)
G31384 NA other upstream 2111822 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 2230066 25693802 ~ 25695381 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 227825 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 239600 28218733 ~ 28221417 (+)
G31636 NA other downstream 305894 28285027 ~ 28320694 (+)
LOC122342379 myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840 other downstream 318169 28297302 ~ 28317582 (+)
G31649 NA other downstream 371220 28350353 ~ 28353226 (+)

Expression


Co-expression Network