LOC122342379 (myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840)


Basic Information

Item Value
gene id LOC122342379
gene name myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28297302 ~ 28317582 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46708
GTGTGGATCACGATTCTTCGCTTCATGGGTGATCTACCAGAACCCAAATACCACACGGCCATCAGCGACGGCAGCGAGAAGATCCCCGTCATGACCAAGATCTACGAGACTCTCGGCAAGAAGACCTACAAGAGAGAGCTGCAGGCTCTGCAGGGAGAAGGAGAGAACTCGCACACGGAGAGCCACAAGAAGAGCAGCGTGCGTCACAAGCTGGTGTCTCTCACCCTGAAGAAGAAGTCGAAGATTACAGAGGAGGTGGGTGATGGGGATGCGGTTACCATGGCGATTTGAGAACTCGGCGACCCCTTCGAGGTCGGGGTTTCTGAGCAGCAAAAACAGTCCTTCTTTTGGTCTTTTAACATCCGTTGAatgtgctttgacacaatatatatatgcattgatAAAAGCgcca
>TU46723
GATTGGCTGAGGAGCAGAAACTGAGGAACCAGATGAGCGCGAGGAAAGCCAAAGAAGAAGCCGAGAAGAAGCACCAGGAGCGCCTGGCGCAGCTGGCTCGAGAAGACGCAGAGCGTGAGAGGAAGGAGCGAGAGGAGGCCCGGAGGAAAAAGGAGATGCTGGACCAGATGGAGAAAGCTCGGCACGAACCGGTCAACGACTCTGATATGGTGGACAAGATGTTCGGCTTCTGGGGACCACTAACTCCTTCCTGACAGGAGGGTCAAGCTCCGGCTGGGTTTGAGGACCTGGAGCGAACGCACAGGGAAATCGAGGAGGAAGACCTGGATGAAGCTCTTCCTCTCCCGGAAGATGATTTGGAAGATTTGTCGGAGTATAAATTTGCCAAGTTCTCTGCCACGTATTTCCAGGGCACGAGCACACACACTTACGTGCGCCGGCCGCTCAAACAGCCCTTACTGTTTCACGAAGACGAAGGAGATCAGCTGGTACGTGACCTTTG
>XM_043236153.1
ATGCGGAAGAAGTGTAACGCCATCGCCAGGACAGAAACGCTATCAGAGAGAAACTCCGCCACATCCAACTTCCTGAAGATGAAGAAATCTGCATTGCTGATCCAGAAAACATGGAGATGCGCCGCGGTTTCTCTCGACTGCAGTATTTGTATCGCCTCTCGTCAAGCTCTTACCAGACGTATCACGTGGCTCGGGCAGAGGATCACTTCTGTTCCAGGGCCAGCTGCAGAGGATACCTTTGCGCGCCGGGCGCTTAGACACCCGACTCTGGGCCGTTATCACACCATCCAGGCGTACACCAGAGGAATGATCGCCACTGCCTCTACAAAAGAGACTCAAAGGAGAgTCTACTTACCCAATACCGCGCGATTGGAGGCAGAGAAGATGCGATTGGCTGAGGAGCAGAAACTGAGGAACCAGATGAGCGCGAGGAAAGCCAAAGAAGAAGCCGAGAAGAAGCACCAGGAGCGCCTGGCGCAGCTGGCTCGAGAAGACGCAGAGCGTGAGAGGAAGGAGCGAGAGGAGGCCCGGAGGAAAAAGGAGATGCTGGACCAGATGGAGAAAGCTCGGCACGAACCGGTCAACGACTCTGATATGGTGGACAAGATGTTCGGCTTCTGGGGACCACTAACTCCTTCCTGACAGGAGGGTCAAGCTCCGGCTGGGTTTGAGGACCTGGAGCGAACGCACAGGGAAATCGAGGAGGAAGACCTGGATGAAGCTCTTCCTCTCCCGGAAGATGATTTGGAAGATTTGTCGGAGTATAAATTTGCCAAGTTCTCTGCCACGTATTTCCAGGGCACGAGCACACACACTTACGTGCGCCGGCCGCTCAAACAGCCCTTACTGTTTCACGAAGACGAAGGAGATCAGCTGGTACATGGCGCTGGCGTGTGGATCACGATTCTTCGCTTCATGGGTGATCTACCAGAACCCAAATACCACACGGCCATCAGCGACGGCAGCGAGAAGATCCCCGTCATGACCAAGATCTACGAGACTCTCGGCAAGAAGACCTACAAGAGAGAGCTGCAGGCTCTGCAGGGAGAAGGAGAGAACTCGCACACGGAGAGCCACAAGAAGAGCAGCGTGCGTCACAAGCTGGTGTCTCTCACCCTGAAGAAGAAGTCGAAGATTACAGAGGAGGTGGGTGACGGGCGTCTGAACGACGGAGAATACACAGTGCGGAACAGCATGCTGGAGGACCGGCCCACGTCCAACCTGGAGAAGCTGCACTTCATCATCGGCAACGGCATCCTTCGGCCAGGCCTGAGGGATGAGATCTACTGTCAGATCTGTAAGCAGCTGACCCAGAATCCCTCTAAAAGCAGTCACGCTCGCGGCTGGATCCTCATGTCTCTGTGCGTCGGCTGCTTTGCTCCTTCTGAGAAGTTTGTGAAGTACCTGAGGAACTATATCAGTGAGGGTCCTCCGGGTTATGCTCCGTACTGCGAGGAGAGACTGAGGAGGACGTTCGTGAACGGAACAAGAACACAACCGCCGTCCTGGCTCGAGCTGCAGGCCACGAAATCAAAGAAGCCGATCATGCTGCCCGTGACGTTTATGGACGGAACCACGAAAACGCTGTTGACGGATTCAGCGACCACAGCCATGGAGCTCTGTAACGCACTCTCAGACAAGATCAGCCTGCAGGATCGCTTCGGCTTCTCCCTGTACATAGCTCTGTTTGATAAGGTGTCGTCTCTGGGCAGCGGTAAGGATCACGTGATGGACGCCGTGTCTCAGTGTGAGCAGTACGCTAAAGAGCAAGGCGCGCAGGAGAGGAACGCCCCCTGGAGGCTGTTCTTCAGGAAGGAGATCTTCACGCCGTGGCACGACCCGACGGAGGACGCCGTCGCCACAAACCTCATCTACCAGCAGATCGTACGCGGCGTCAAGTTCGGCGAGTACCGCTGCGACCGGGAGGATCTGGCGGAGCTGGCCTCGCAGCAGTATTACGTGGACTACGGCTCGGAGATCCTCGTGGAGCGTCTGTTGAGTCTCATTCCGTCCTACATCCCCGACAGAGACATCAGCTCGGCCAAAACCGTGGAGAGATGGGCTCAGTTCATCATGGCGGCGCACAAAAAGGGCGTCTACACCCAGAAGAGAGTCGATCCTCAGAAAGTGAAGGAAGAAGTGGTGGATTTCGCTCGCTATAAGTGGCCTTTGTTATTCTCCAGATTCTACGAAGCCTTTAAGTTTTCGGGCCCGAGTCTCCCCAAGAACGACGTGATCGTGGCTGTAAACTGGACGGGCGTCTACTTCGTGGACGAGCAGGAGCAGGTTCTTCTGGAGCTGTCTTTCCCAGAGATCACGGCGGTGTCCAGCAGCAAAGGAGGGAAGCTTCAGGCCCAGAGCTTCACTTTGGCCACCATCAAAGGAGACGAGTACACGTTTACGTCTAATAACGCCGAGGACATTCGGGATCTGGTGGTCACCTTCCTGGAGGGACTCCGGAAGAGGTCCAAGTTTGTTGTGGCCTTACAAGACAATCCCAGCCCAGCCGGGGATGATTCGACGTTCCTGAGCTTCCTGAAGGGCGACCTGATTGTCCTGGACCAGGACACGGGCGAGCAGGTCATGACCTCTGGCTGGGCTCACGGGATCAACGACAGAAGCAAGCAGAAAGGAGACTTCCCAGCGGACTGTGTTTACGTGCTGCCCACAGTCGTGAGACCTCCGTCAGACGTCGTGGCGTTGGTCATCATGACTCCGGACCAGCGGCAGGAGTCCATCCGGATCTCCCATGTTCCTGTGATGGAGACGGAGGAGAGGATAAAGCCCTACACGCTGGAGGAGTTCTCCTACGACTACTTCAGgcCTCCTCCCAAACACACGCTCAGCAGAGTGATGATCACCAAGAACCGAGGGAAGGACAAGCTGTGGTGCTGCACTCGAGAGCCCATCAAACAGGCCCTGCTGAAGAAGTGTGTGGGCCACGAGGAGCTTTCCCAGGAGGCCTGCATGGCTTTCATTGCTGTGATGAAGTATATGGGGGATTATCCGTCTAAACGCACTCGCTCTGTGAACGAGCTCACGGATCAGATCTTTGAAGGTGCGCTGAAGGCAGAGCCTCTGAAAGACGAGATCTACAGCCAGATCATCAAACAGCTGACTGAAAACCACGTCAAgtacAGCGAGGAGAAGGGCTGGGAGCTGCTCTGGCTGTGCGCCGGTCTCTTTCCTCCCAGTAATGTCCTCTTGCCACACGTCCAGAGGTTTCTCCAGTCCAAGAAACACCACCCGCTGGCTTCTGACTGCATGCAGAGACTGCAGAAAGCTCTACGGAACGGCTCTCGCAAGTACCCGCCGCATCTCGTGGAGGTGGAGGCGATTCAACACAAGACCACGCAGATCTTTCACAAAGTCTACTTCCCCGACGACACCGATGAGGCCTTCGAGGTGGAGTCCAGCACAAAGGCCAAAGACTTCTGTCTGAACATCTCCGGCAGACTGCTGCTCAAGTCACCCGACGGCTTCAGTCTGTTCGTCAAGATCTCTGATAAGGTGATAAGCGTACCCGAGGGTGATTTCTTCTTCGACTTCGTCCGTCATCTGACAGATTGGATCAAGAAAGCGAGACCCGCTAAAGACGGTATAGTGCCTTCGTTGACCTACCAGGTGTTTTTCATGAAGAAGTTGTGGACGACCACGGTTCCGGGCAAAGACTCCTTCGCAGACTCCATCTTTCATTATTACCAGGAGCTTCCCAAGTATCTGCGTGGATATCACAAATGCTCCCGAGAAGAGGTTTTCCAGCTCGGCGCTCTGATCTACCGGGTCAAATTCGAGGACGACAAATCGCACTTTCCCAGCATTCCCAAGATGCTGAAGGAGATGATTCCTCAGGATCTGATTCGCCAGCTCTCGCCCGACGACTGGAAGAGGTCGGTTGTGGCGTACTTCAACAGGCACGCTGGGAAATCGAGGGAAGAAGCCAAGCTGATGTTTCTGAAGCTCATCTTCAAGTGGCCCACGTTCGGGTCGGCCTTCTTCGAAGTGAAGCAAACCACCGAGCCGCATTTCCCTGAGATCCTGCTGATAGCCATCAATAAATATGGAGTCAGTCTGATCGACCCCAAGAACAAGGATATTTTAACCACGTACCCCTTCACCAAGATTTCTAACTGGAGCAGCGGGAACACGTACTTCCACATCACGATCGGAAACCTGGTTCAGGGCAGCAAACTTCTGTGTGAGACGTCACTGGGCTACAAGATGGATGACCTGCTGACGTCCTACATCAGCCAGATGCTGACCACCATGAGCAAGCAGCGGCATTCGCGCGGCCAGAGCAAGTGAACGTTTGATTGGCGCGAGGCGGCGGAGCTGGTGCGACTGCTGCGGCCGATTGGTCGACCGTGCAGCTGGGGGCGGGCCTTCGCGTCCCAGCTGTGGCGAATGAGCCGCACCCCCTCGGCCAGCTCCCAGGGCTCCGAGTATCCCAACGAAGACTCTTCGTCCGCCTCCAGCGAGGACGACTACCTCTGAGCAGAGCTCCTGCTTCTGGGAAACGACGCCTGACTCTAGAAACGTGTGTTATGCGTGTCcttggagcacagaagcagtcgTAGGCGGCAACGTTTCTTTGATGCCTTAGACTATTAAGCAAAATATCTTGTGCATTTCTTATCGTAAACATATCGAAGCCTCATTTGCGATTAGTAAGACGTATTTGGACTTTTTCTCGATATCTTGATTTGTTtccaccctcagattccagaaaTAATTGCACCTCAGCCAAATACGGtcttatcctaacaaaccagacgcCGACGGAACGATTTCCGCCGTACGACTCTCAGCTCTCatgactgtttttgtgctccagggtcacgcATCACTAAGTTGAATATGAACTGGAACGGCTTTGCTAGAAGCGGACTGTGCTGTATTCCTCCCAAACGGCGTTTGGATTGTTCAACATTC

Function

symbol description
myo7aa Predicted to enable actin filament binding activity and microfilament motor activity. Acts upstream of or within several processes, including detection of mechanical stimulus involved in sensory perception; neuron differentiation; and protein localization to cilium. Predicted to be located in cytoskeleton. Predicted to be part of myosin complex. Predicted to be active in several cellular components, including actin cytoskeleton; microvillus; and vesicle. Is expressed in brain; otic vesicle; sensory system; and tether cell. Human ortholog(s) of this gene implicated in Leber congenital amaurosis; Usher syndrome (multiple); auditory system disease (multiple); and congenital nystagmus. Orthologous to human MYO7A (myosin VIIA).
myo7a Enables calmodulin binding activity; cytoskeletal protein binding activity; and microfilament motor activity. Involved in several processes, including equilibrioception; lysosome organization; and visual perception. Acts upstream of or within sensory perception of sound. Located in several cellular components, including lysosomal membrane; photoreceptor inner segment; and photoreceptor outer segment. Implicated in Leber congenital amaurosis; Usher syndrome (multiple); auditory system disease (multiple); and congenital nystagmus.

NR:

description
PREDICTED: unconventional myosin-VIIa-like

GO:

id name namespace
GO:0006897 endocytosis biological_process
GO:0008152 metabolic process biological_process
GO:0060122 inner ear receptor cell stereocilium organization biological_process
GO:0035315 hair cell differentiation biological_process
GO:0050974 detection of mechanical stimulus involved in sensory perception biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0003774 motor activity molecular_function

KEGG:

id description
K10359 MYO7A, USH1B; myosin VIIa

RNA

RNA id representative length rna type GC content exon number start site end site
TU46708 False 412 TUCP 0.51 2 28302407 28302897
TU46723 False 502 TUCP 0.55 2 28300027 28301346
XM_043236153.1 True 4932 mRNA 0.55 32 28297302 28317582

Neighbor

gene id symbol gene type direction distance location
LOC122342376 LOC107694127,LOC107717944,LOC107590657,LOC107752637,LOC107552269 coding upstream 96291 28197236 ~ 28201011 (+)
LOC122342444 krt1-19d,LOC107665143,LOC107666326,LOC107753925,LOC107563035 coding upstream 187255 28106617 ~ 28110047 (+)
krt91 krt91,cki,LOC107727715,LOC107563033,LOC107753907,LOC107666324,LOC107549866,LOC107753917 coding upstream 214332 28080859 ~ 28082970 (+)
si:ch211-264f5.2 NA coding upstream 333072 27952149 ~ 27964230 (+)
zgc:174904 LOC107752529,LOC107665157,LOC107549855 coding upstream 352010 27941676 ~ 27945292 (+)
dhdh.1 LOC107665437,LOC107668471,LOC107709394,LOC107553352 coding downstream 36848 28354430 ~ 28360242 (+)
dhdh.2 zgc:101723,LOC107665090,LOC107712874 coding downstream 43364 28360946 ~ 28367478 (+)
LOC122343436 parp6,LOC107668484,LOC107665100,LOC106587213 coding downstream 69925 28387507 ~ 28410310 (+)
celf6 celf6,LOC106535005 coding downstream 103667 28421249 ~ 28537332 (+)
LOC122342381 LOC107665446,LOC107595396,LOC107713214,LOC107553351,LOC107753194,LOC107676404 coding downstream 276295 28593877 ~ 28594995 (+)
G31631 myo7aa,LOC107660700,LOC106612882,LOC106581013 non-coding upstream 26718 28270102 ~ 28270584 (+)
G31621 NA non-coding upstream 69001 28226400 ~ 28228301 (+)
G31603 NA non-coding upstream 135037 28144440 ~ 28162265 (+)
G31596 NA non-coding upstream 176143 28120252 ~ 28121159 (+)
G31548 NA non-coding upstream 229512 27960947 ~ 28067790 (+)
G31551 LOC107709388,LOC107595343,LOC107712845,LOC107668482,LOC107553360 non-coding downstream 54803 28372385 ~ 28375787 (+)
LOC122342705 NA non-coding downstream 63030 28380612 ~ 28385954 (+)
G31653 NA non-coding downstream 203402 28520984 ~ 28541933 (+)
LOC122342517 NA non-coding downstream 250703 28568285 ~ 28593867 (+)
G31665 NA non-coding downstream 329395 28646977 ~ 28652833 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other upstream 75885 28218733 ~ 28221417 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other upstream 81054 28206958 ~ 28216248 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other upstream 891214 27360843 ~ 27406088 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other upstream 926106 27297536 ~ 27371196 (+)
G31649 NA other downstream 32771 28350353 ~ 28353226 (+)
LOC122343276 LOC107561645,LOC107679413,LOC107569100,LOC107747810,LOC107734660,LOC107655025 other downstream 513053 28830635 ~ 28893627 (+)
LOC122342386 LOC107670352,LOC107565530,LOC107659779,LOC107747635,LOC107566978,LOC107561645,LOC107665206,LOC108183462,LOC107749046,LOC107574515,LOC107671223,LOC107663329,LOC107575399,LOC107576964,LOC107571858,LOC107575109,LOC107698614 other downstream 688183 29005765 ~ 29185529 (+)

Expression


Co-expression Network