G31631 (myo7aa,LOC107660700,LOC106612882,LOC106581013)


Basic Information

Item Value
gene id G31631
gene name myo7aa,LOC107660700,LOC106612882,LOC106581013
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28270102 ~ 28270584 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46711
GAGAGACTGAGGAGGACGTTCGTGAACGGAACAAGAACACAACCGCCGTCCTGGCTCGAGCTGCAGGCCACGAAATCAAAGAAGCCGATCATGCTGCCCGTGACGTTTATGGACGGAACCACGAAAACGCTGTTGACGGATTCAGCGACCACAGCCATGGAGCTCTGTAACGCACTCTCAGACAAGATCAGCCTGCAGGATCGCTTCGGCTTCTCCCTGTACATAGCTCTGTTTGATAAGGTACCACCAAGATATTACCGCGTATGTTTAACTCATCAGAGTTCAGCACAGTTCACTGAAACCTGTCGCACGCCATCTACTATTCTaatcctaaaatattaaaaaagtcgacaaatacaaaattgcattttgcatgGAAAAACATTCAACG

Function

symbol description
myo7aa Predicted to enable actin filament binding activity and microfilament motor activity. Acts upstream of or within several processes, including detection of mechanical stimulus involved in sensory perception; neuron differentiation; and protein localization to cilium. Predicted to be located in cytoskeleton. Predicted to be part of myosin complex. Predicted to be active in several cellular components, including actin cytoskeleton; microvillus; and vesicle. Is expressed in brain; otic vesicle; sensory system; and tether cell. Human ortholog(s) of this gene implicated in Leber congenital amaurosis; Usher syndrome (multiple); auditory system disease (multiple); and congenital nystagmus. Orthologous to human MYO7A (myosin VIIA).

NR:

description
PREDICTED: unconventional myosin-VIIa-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46711 True 391 lncRNA 0.47 2 28270102 28270584

Neighbor

gene id symbol gene type direction distance location
LOC122342376 LOC107694127,LOC107717944,LOC107590657,LOC107752637,LOC107552269 coding upstream 69091 28197236 ~ 28201011 (+)
LOC122342444 krt1-19d,LOC107665143,LOC107666326,LOC107753925,LOC107563035 coding upstream 160055 28106617 ~ 28110047 (+)
krt91 krt91,cki,LOC107727715,LOC107563033,LOC107753907,LOC107666324,LOC107549866,LOC107753917 coding upstream 187132 28080859 ~ 28082970 (+)
si:ch211-264f5.2 NA coding upstream 305872 27952149 ~ 27964230 (+)
zgc:174904 LOC107752529,LOC107665157,LOC107549855 coding upstream 324810 27941676 ~ 27945292 (+)
dhdh.1 LOC107665437,LOC107668471,LOC107709394,LOC107553352 coding downstream 83846 28354430 ~ 28360242 (+)
dhdh.2 zgc:101723,LOC107665090,LOC107712874 coding downstream 90362 28360946 ~ 28367478 (+)
LOC122343436 parp6,LOC107668484,LOC107665100,LOC106587213 coding downstream 116923 28387507 ~ 28410310 (+)
celf6 celf6,LOC106535005 coding downstream 150665 28421249 ~ 28537332 (+)
LOC122342381 LOC107665446,LOC107595396,LOC107713214,LOC107553351,LOC107753194,LOC107676404 coding downstream 323293 28593877 ~ 28594995 (+)
G31621 NA non-coding upstream 41801 28226400 ~ 28228301 (+)
G31603 NA non-coding upstream 107837 28144440 ~ 28162265 (+)
G31596 NA non-coding upstream 148943 28120252 ~ 28121159 (+)
G31548 NA non-coding upstream 202312 27960947 ~ 28067790 (+)
G31557 NA non-coding upstream 290969 27925447 ~ 27979133 (+)
G31551 LOC107709388,LOC107595343,LOC107712845,LOC107668482,LOC107553360 non-coding downstream 101801 28372385 ~ 28375787 (+)
LOC122342705 NA non-coding downstream 110028 28380612 ~ 28385954 (+)
G31653 NA non-coding downstream 250400 28520984 ~ 28541933 (+)
LOC122342517 NA non-coding downstream 297701 28568285 ~ 28593867 (+)
G31665 NA non-coding downstream 376393 28646977 ~ 28652833 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other upstream 48685 28218733 ~ 28221417 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other upstream 53854 28206958 ~ 28216248 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other upstream 864014 27360843 ~ 27406088 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other upstream 898906 27297536 ~ 27371196 (+)
G31636 NA other downstream 14443 28285027 ~ 28320694 (+)
LOC122342379 myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840 other downstream 26718 28297302 ~ 28317582 (+)
G31649 NA other downstream 79769 28350353 ~ 28353226 (+)
LOC122343276 LOC107561645,LOC107679413,LOC107569100,LOC107747810,LOC107734660,LOC107655025 other downstream 560051 28830635 ~ 28893627 (+)
LOC122342386 LOC107670352,LOC107565530,LOC107659779,LOC107747635,LOC107566978,LOC107561645,LOC107665206,LOC108183462,LOC107749046,LOC107574515,LOC107671223,LOC107663329,LOC107575399,LOC107576964,LOC107571858,LOC107575109,LOC107698614 other downstream 735181 29005765 ~ 29185529 (+)

Expression


Co-expression Network