LOC122342472 (znf384l,LOC107665159,LOC107752514)


Basic Information

Item Value
gene id LOC122342472
gene name znf384l,LOC107665159,LOC107752514
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28181566 ~ 28187257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU46883
TCTGAATAAGATGAAAGAGCAGCTGGGGCCGGACAAGGGAGCTGGTTTTCCGCACTCGTCCGCGGCGCACTACCCCACGGCGGTGCTGACGGTGCCGGGCTCGGTCGCCATGGACACGGGAGCCGTCGGGAGGGTGCCCAAGCAggagggtggaggaggaggagcgaGCGGGACGGCAGGGCCGCAGATATCCGGCGTGGGAGCGCACCTGCATCCTCCTCACACGTCCCAGAACATCACGGTGGTGCCTGTCCCGTCCACCGGCATCATGACAGCAGCAGGGTTAGTGATCACGACTCCTCAAGGGGCGCTGGTCACTCCTCCTTCCTCCTCGCAGTCTTTTGTTTCTGGACCTCCCACAACGACCATGATCGTGTCCGCTTTACACCCAACTAACACAGGTAGAGAGTTATACTCCACCTTCTCGC
>XM_043236294.1
ATGTTGCTTTTCAATTGCAGAAATAATGGAAGATTCCCATTTCAACTCATCATACTTTTGGTCTCCCGTTCCAACAGTGCAAGGACAGATTGAGAACGCCATGTTTCTGAATAAGATGAAAGAGCAGCTGGGGCCGGACAAGGGAGCTGGTTTTCCGCACTCGTCCGCGGCGCACTACCCCACGGCGGTGCTGACGGTGCCGGGCTCGGTCGCCATGGACACGGGAGCCGTCGGGAGGGTGCCCAAGCAggagggtggaggaggaggagcgaGCGGGACGGCAGGGCCGCAGATATCCGGCGTGGGAGCGCACCTGCATCCTCCTCACACGTCCCAGAACATCACGGTGGTGCCTGTCCCGTCCACCGGCATCATGACAGCAGCAGGGTTAGTGATCACGACTCCTCAAGGGGCGCTGGTCACTCCTCCTTCCTCCTCGCAGTCTTTTGTTTCTGGACCTCCCACAACGACCATGATCGTGTCCGCTTTACACCCAACTAACACAGAGGCTGTCCGGCCCCCTTCCCTCTATCTCCACAGCCACTATAAGAAAGAGGACGGAAGTATCCCACCCGCTGTAGTCATGCCACTTCCCTCAAAGCGGGGCAGAAAGAAGAAGTCCATGATGCCAAGGGCAGGTCCCGTTTCAGCCCATGCGCTCGCCACAGGAAGTGATGCGCTGATTCTTGCACACCTGGCCACTGGGGGACAGCACAACACGAGTGACCCGTATGACCTTTCCAATGACGAGGATGATCATCCAGGCAAAGATGGGAACAAGTCATACAGGTGCAACGAAtaatcattttcttaaatatttgcaGGCTTGATTAATTTTTGGTGCATTAAGGACTGCCACGCTTGACACtgtttgaatgtgtgtttgAACATTTAACTGACATGACCTTTCTGCCGCCTTACAAAAATATCGCTATATTTTCCACCAGCTTGTAAGGGAGCGTCTAGAAAGGTGAATGCAAATGGAATTGATGATCAGTATAGCTTCTCAAGG
>XM_043236295.1
ATGTTGCTTTTCAATTGCAGAAATAATGGAAGATTCCCATTTCAACTCATCATACTTTTGGTCTCCCGTTCCAACAGTGCAAGGACAGATTGAGAACGCCATGTTTCTGAATAAGATGAAAGAGCAGCTGGGGCCGGACAAGGGAGCTGGTTTTCCGCACTCGTCCGCGGCGCACTACCCCACGGCGGTGCTGACGGTGCCGGGCTCGGTCGCCATGGACACGGGAGCCGTCGGGAGGGTGCCCAAGCAggagggtggaggaggaggagcgaGCGGGACGGCAGGGCCGCAGATATCCGGCGTGGGAGCGCACCTGCATCCTCCTCACACGTCCCAGAACATCACGGTGGTGCCTGTCCCGTCCACCGGCATCATGACAGCAGCAGGGTTAGTGATCACGACTCCTCAAGGGGCGCTGGTCACTCCTCCTTCCTCCTCGCAGTCTTTTGTTTCTGGACCTCCCACAACGACCATGATCGTGTCCGCTTTACACCCAACTAACACAGATAAGAAAGAGGACGGAAGTATCCCACCCGCTGTAGTCATGCCACTTCCCTCAAAGCGGGGCAGAAAGAAGAAGTCCATGATGCCAAGGGCAGGTCCCGTTTCAGCCCATGCGCTCGCCACAGGAAGTGATGCGCTGATTCTTGCACACCTGGCCACTGGGGGACAGCACAACACGAGTGACCCGTATGACCTTTCCAATGACGAGGATGATCATCCAGGCAAAGATGGGAACAAGTCATACAGGTGCAACGAAtaatcattttcttaaatatttgcaGGCTTGATTAATTTTTGGTGCATTAAGGACTGCCACGCTTGACACtgtttgaatgtgtgtttgAACATTTAACTGACATGACCTTTCTGCCGCCTTACAAAAATATCGCTATATTTTCCACCAGCTTGTAAGGGAGCGTCTAGAAAGGTGAATGCAAATGGAATTGATGATCAGTATAGCTTCTCAAGGc

Function

NR:

description
PREDICTED: zinc finger protein 384-like isoform X1

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46883 False 428 TUCP 0.62 2 28185330 28186778
XM_043236294.1 True 1012 mRNA 0.53 6 28181567 28187257
XM_043236295.1 False 974 mRNA 0.53 5 28181566 28187257

Neighbor

gene id symbol gene type direction distance location
LOC122342473 znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding downstream 3980 28171251 ~ 28177586 (-)
LOC122342469 si:dkeyp-113d7.1,LOC107727714,LOC107549870,LOC107563030,LOC107665141,LOC103032369 coding downstream 63234 28113502 ~ 28118332 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding downstream 143866 27981070 ~ 28037700 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding downstream 204391 27969910 ~ 27977175 (-)
LOC122343310 LOC107752528,LOC107549854 coding downstream 211797 27966309 ~ 27969769 (-)
LOC122343218 omp,ompa,LOC107735103 coding upstream 24989 28212246 ~ 28213047 (-)
pkma pkma,LOC107712845,LOC107665073,LOC107595343,LOC107668482 coding upstream 181198 28368455 ~ 28382557 (-)
LOC122342383 NA coding upstream 767091 28954348 ~ 28956291 (-)
LOC122342474 NA non-coding downstream 51758 28127214 ~ 28129808 (-)
G31737 NA non-coding downstream 85075 28095894 ~ 28096491 (-)
G31736 NA non-coding downstream 101185 28080175 ~ 28080381 (-)
G31728 NA non-coding downstream 238762 27941679 ~ 27942804 (-)
G31723 NA non-coding downstream 258390 27920620 ~ 27923176 (-)
G31759 NA non-coding upstream 39157 28226414 ~ 28228301 (-)
G31765 NA non-coding upstream 57733 28244990 ~ 28250107 (-)
LOC122343220 NA non-coding upstream 94782 28282039 ~ 28319833 (-)
G31777 NA non-coding upstream 199984 28387241 ~ 28387769 (-)
G31786 NA non-coding upstream 214448 28401705 ~ 28405804 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other downstream 51186 28120247 ~ 28130380 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other downstream 113804 28065297 ~ 28067762 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other downstream 536834 27642692 ~ 27644732 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other downstream 565625 27539355 ~ 27615941 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other downstream 792168 27383753 ~ 27389398 (-)
G31776 LOC107712874 other upstream 176768 28364025 ~ 28365196 (-)
G31868 NA other upstream 656936 28844193 ~ 28846421 (-)
G31890 NA other upstream 786096 28973353 ~ 29012765 (-)

Expression


Co-expression Network