LOC122342386 (LOC107670352,LOC107565530,LOC107659779,LOC107747635,LOC107566978,LOC107561645,LOC107665206,LOC108183462,LOC107749046,LOC107574515,LOC107671223,LOC107663329,LOC107575399,LOC107576964,LOC107571858,LOC107575109,LOC107698614)


Basic Information

Item Value
gene id LOC122342386
gene name LOC107670352,LOC107565530,LOC107659779,LOC107747635,LOC107566978,LOC107561645,LOC107665206,LOC108183462,LOC107749046,LOC107574515,LOC107671223,LOC107663329,LOC107575399,LOC107576964,LOC107571858,LOC107575109,LOC107698614
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 29005765 ~ 29185529 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47005
CAATCTCACTGCTGAGTcttgtgaaagtttgtcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagattgtctggctgtatggtgacagaggaaggctgtggttatgtgtcttcagctctgacttcaaaccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcactaaataaactcaatgttgagcatggaggagaatccaggattacagcaggactCAAGAAATatgagtgttttttcacactggatccaaacacagcacacactcgtctcattctgtctgaggagaacagaaaggtgacacttgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtgtgtgtcaggtgttgtgtgagagagtgtgtgtggacgctgttactgggagactgagtggagTGGAGGTGTGtctatatcagtgtcatataagaacatcagcaggaagggaccgggtgaagagtgtgtgtttggatctaatgatcagtcctggagtttgatctGCTCTCCTGACAGATACTCCTTCAGACACAATAAGATAGAGACTGATCtctctgtgaagcccatcatcatcagaagaagaagaagaagaagaggagagtATGGAGATATctacagagtaggagtgtatgtggatgagagcgcaggaactctgtccttcttcagcgtctctgactcaatgagactcatccacacagtccagaccacattcactcagacactctgtcctgggtttaggttttattattctggatcatcagtgaaactgtgttgatgaatcagaagagactgatgagattctacccagaatgctttgagctgcttgatgaatcagtaacagtgagatgttatgagtctcttcaagacattaatactgcagctcaacttctatagaaacagaaagataagaattaataattcatctaaaaaatagatataaaagaagaaatgtgtcagaaataaaaagatctgtgtgtttctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtatgtgtatgtgtgtgtgtgtgtgtgtgtctgtgtgagtgtgtgtagttaaaaaaatctaatttttattaaatattacatctatagtttattcatttaaattgtaatttaaatcattttattgttttattttttcatattaacaaaaataaaatctacatttGTCTTTAATTTGACTTATtgatatcttattattatttgttattattatgaaatactgaattttattctaattttagacGTGC
>TU47007
agtcatgctagcgacatgctagtcacttgctaatcatgctagaaacatgctagacacatgctagtcacttgatAAGCATGATAGAGACATAGAGCAAACCGGACTTCAGACATATTAGTGATGCTAGCAGTGCTACATGCTAACTGTGTCTAGCTACATGCTCATTCATGATGAGAACTCTATAAAACTCAATAGTAAGAAGCAACCGAGCGCAAGTTTTgtcacggcaagcaccactcaaaAGTTCTTTAGGAAATGTACTTTCAAGTTCTTTGTCTTGTTCTTTACACAGGTTATGTGGATGCAAACTCACTGCTCAGTcttgtgaaagtttgtcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattctggagtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagGCTATGTGGATGCACACTTACTGCTCAGTcttgtgaaagtttgtcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagattgtctggctgtatggtgacagagaaaggctgtggttatgtgtcttcagctctgacttcaaacccctcacacctgagagagctggatctagctacaatcatcctggagattcaggagtgaaactgctctctgaaaaactgaaggatccaaactgctcagtaaataaactcaatgttgagcatggaggagaatccaggattacagcaggactCAAGAAATgggtgtgttttttcacactggatccaaacacagcacacactcgtctcattctgtctgaggagaacagaaaggtgacacttgtgtctcagtctcagtcgtatcctgatcatccagacagatttgatggtGTGTATcctcaggtgttgtgtagag
>XM_043236158.1
atgaaggcAGAAGAAGTAGAGGtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagGCTATGTGGATGCACACTTACTGCTCAGTcttgtgaaagtttgtcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagGCTATGTGGATGCAGTCTTACTGCTCAGTCTTGTAAAAGTttatcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattctggagtgaagctgctctcagaaggactgaagagtccaaactgtcatctggagattctgagGCTATGTGGATGCAATCTCACTGCTGAGTCTTGTAAAAGTttatcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgctgcaggattcaggagtgaagctgctctctgaaggactgaagagtccaaactgtcatctggagattctgagGCTATGTGGATGCAATCTCACTGCTGAGTcttgtgaaagtttgtcttcagttttacaatcctcaaactcaaacatcctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgaaggactgaagaTTTGA

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase TRIM69-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47005 True 1506 lncRNA 0.40 4 29034255 29044792
TU47007 False 1019 lncRNA 0.44 5 29014545 29185529
XM_043236158.1 False 765 mRNA 0.45 7 29005765 29034527

Neighbor

gene id symbol gene type direction distance location
LOC122342385 LOC107749047,LOC107728228,LOC107574018,LOC107722090,LOC107685875,LOC107553362,LOC107569032,LOC107669894 coding upstream 12648 28970251 ~ 28993117 (+)
LOC122342381 LOC107665446,LOC107595396,LOC107713214,LOC107553351,LOC107753194,LOC107676404 coding upstream 410770 28593877 ~ 28594995 (+)
celf6 celf6,LOC106535005 coding upstream 468433 28421249 ~ 28537332 (+)
LOC122343436 parp6,LOC107668484,LOC107665100,LOC106587213 coding upstream 595455 28387507 ~ 28410310 (+)
dhdh.2 zgc:101723,LOC107665090,LOC107712874 coding upstream 638287 28360946 ~ 28367478 (+)
G31845 NA non-coding upstream 2788 28997728 ~ 29002977 (+)
LOC122343449 NA non-coding upstream 147250 28856131 ~ 28858515 (+)
G31665 NA non-coding upstream 352932 28646977 ~ 28652833 (+)
LOC122342517 NA non-coding upstream 411898 28568285 ~ 28593867 (+)
G31653 NA non-coding upstream 463832 28520984 ~ 28541933 (+)
LOC122343276 LOC107561645,LOC107679413,LOC107569100,LOC107747810,LOC107734660,LOC107655025 other upstream 112138 28830635 ~ 28893627 (+)
G31649 NA other upstream 652539 28350353 ~ 28353226 (+)
G31636 NA other upstream 685071 28285027 ~ 28320694 (+)
LOC122342379 myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840 other upstream 688183 28297302 ~ 28317582 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other upstream 784348 28218733 ~ 28221417 (+)

Expression


Co-expression Network