Fish Transcriptome and Expression Database

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ornamental fish

G31848

Basic Information

Item	Value
gene id	G31848
gene name	NA
gene type	non-coding
species	tiger barb (Puntius tetrazona)
category of species	ornamental fish

Chromosome Information

Item	Value
chromosome id	NC_056702.1
NCBI id	CM032071.1
chromosome length	29200999
location	29006637 ~ 29025893 (+)
genome version	ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47028
TGATTGCAAGAGGCTCAATCGCTATCACAAACAGCAAAGGACTGGAGAGACACCCTTGACGTGTTccacaatgtaataaaaatgcctGTGACTTCTCTTCAGTGATCAGAAAATAAGATGTTGTGGTAATCACATTTGATATAAGTTTGGAAACTAGCAAAAAATCTATTCTACAGAAAGACTTGTGTCTTAGTGAAAAAAGAATAGTCTCTACTAGTGGGATGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU47028	True	227	lncRNA	0.37	2	29006637	29025893

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
LOC122342385	LOC107749047,LOC107728228,LOC107574018,LOC107722090,LOC107685875,LOC107553362,LOC107569032,LOC107669894	coding	upstream	13520	28970251 ~ 28993117 (+)
LOC122342381	LOC107665446,LOC107595396,LOC107713214,LOC107553351,LOC107753194,LOC107676404	coding	upstream	411642	28593877 ~ 28594995 (+)
celf6	celf6,LOC106535005	coding	upstream	469305	28421249 ~ 28537332 (+)
LOC122343436	parp6,LOC107668484,LOC107665100,LOC106587213	coding	upstream	596327	28387507 ~ 28410310 (+)
dhdh.2	zgc:101723,LOC107665090,LOC107712874	coding	upstream	639159	28360946 ~ 28367478 (+)
G31845	NA	non-coding	upstream	3660	28997728 ~ 29002977 (+)
LOC122343449	NA	non-coding	upstream	148122	28856131 ~ 28858515 (+)
G31665	NA	non-coding	upstream	353804	28646977 ~ 28652833 (+)
LOC122342517	NA	non-coding	upstream	412770	28568285 ~ 28593867 (+)
G31653	NA	non-coding	upstream	464704	28520984 ~ 28541933 (+)
LOC122343231	LOC107747643,LOC107741456,LOC107747810,LOC107734660	non-coding	downstream	129540	29155433 ~ 29165907 (+)
LOC122343276	LOC107561645,LOC107679413,LOC107569100,LOC107747810,LOC107734660,LOC107655025	other	upstream	113010	28830635 ~ 28893627 (+)
G31649	NA	other	upstream	653411	28350353 ~ 28353226 (+)
G31636	NA	other	upstream	685943	28285027 ~ 28320694 (+)
LOC122342379	myo7aa,myo7a,LOC107660700,LOC107735900,LOC107600840	other	upstream	689055	28297302 ~ 28317582 (+)
G31619	capn5,capn5a,LOC107713096,LOC107600851,LOC107660684	other	upstream	785220	28218733 ~ 28221417 (+)

Expression

Co-expression Network