G31881


Basic Information

Item Value
gene id G31881
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28906179 ~ 28985530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47066
cacacacacacacacacagatctttctatttctgacacatttcttcttttatatctatttttttatatgaattattaattcttatctttctgtttctatagaagttgagctgcagtattaatgtcttgaagagactcataacatctcactgttactgattcatcatgcagctcaaagcattctgggtagaatctcatcagtctcttctgattcatcaacacagtttcactgatgatttataataataaaaactaaacccaggacagagtgtctgagtgaatgtggtctggactgtgtggatgagtctcattgagtcagagacgctgaagaaggacagagttcctgcgctctcatccacatacactcctactctgtagATATCTTCATActctcctgttcttcttcttctgatgatgatgggcttcacagagaGATCAGTCTTTATCTTATTGTGTATGAAGGAGTAACTGTGAGGAGAGCAgaacaaactccaggactgatcattagatccaaacacacactcttcacccggtcccttcctgctgatgttcttatatgacactgatataaacacacctccactccactcagtctcccagtaacagcgtccacacacactctctctacacaacacctgataCACaccatcaaatctgtctggatgatcaggatacgactgagactgagacacCCACTTCAcctttctgttctcctcagacagaatGAGACGAGTGtctgctgtgtttggatccagtgtgaaaaaacactcatctgaacagaagaacagagacattaataacacaacaatcactacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtg
>TU47068
taaattgtttaacaTTTGCTGGTTGTTTCCATACTTCCATACGCATTAATTTACAGAACCAATGACTTTCCTCTTATTCTGAAACAAGGAAAATGTCCCAAATATGTGACTTTGGTGAACGTCTGagataataaaagtgaaaatgcgGCGCATTAAAGgcaaaactaaagcaaaaatgagttgtgttgcattattaattcttatctttctgtttctatagaagttgagctgcagtattaatgtcttgaagagactcataacatctcactgttactgattcatcatgcagctcaaagcattctgggtagaatctcatcagtctcttctgattcatcaacacagtttcactgatgatttataataataaaaactaaacccaggacagagtgtctgagtgaatgtggtctggactgtgtggatgagtctcattgagtcagagacgctgaagaaggacagagttcctgcgctctcatccacatacactcctactctgtagATATCTTCATActctcctgttcttcttcttctgatgatgatgggcttcacagagaGATCAGTCTCTATCTTATTGTGTTTGAATGAGTATCTGTCAGGAGAGCAgaacaaactccaggactgatcattagatccaaacacacactcttcacccggtcccttcctgctgatgttcttatatgacactgatatctCCACACCTCTActccactcagtctcccagtaatAGCgccccacacacactctctctacacaacacctgaggATACACaccatcaaatctgtctggatgatcaggatactgACTGAGACTGAGACACCCACTTCACCTTTCTGTTCTCTCAGACAGAATGAGACGAGTGtctgctgtgtttggatccagtgtgaaaaaacactcatctgaacagaagaacagagacattaataacacaacaatcactacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47066 False 936 lncRNA 0.42 2 28906179 28983812
TU47068 True 1059 lncRNA 0.42 3 28906179 28985530

Neighbor

gene id symbol gene type direction distance location
pkma pkma,LOC107712845,LOC107665073,LOC107595343,LOC107668482 coding downstream 523622 28368455 ~ 28382557 (-)
LOC122343218 omp,ompa,LOC107735103 coding downstream 693132 28212246 ~ 28213047 (-)
LOC122342473 znf362b,LOC107593390,LOC107737708,LOC107565834,LOC107699608,LOC107712695,LOC107671956,LOC108434701 coding downstream 728593 28171251 ~ 28177586 (-)
LOC122342469 si:dkeyp-113d7.1,LOC107727714,LOC107549870,LOC107563030,LOC107665141,LOC103032369 coding downstream 787847 28113502 ~ 28118332 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding downstream 868479 27981070 ~ 28037700 (-)
G31867 NA non-coding downstream 63740 28841910 ~ 28842439 (-)
G31815 NA non-coding downstream 241751 28658370 ~ 28664428 (-)
G31816 NA non-coding downstream 253346 28646972 ~ 28652833 (-)
G31808 NA non-coding downstream 357253 28546475 ~ 28548926 (-)
G31798 NA non-coding downstream 364430 28523638 ~ 28541749 (-)
G31910 NA non-coding upstream 24407 29009937 ~ 29015013 (-)
G31911 NA non-coding upstream 27327 29012857 ~ 29113174 (-)
G31868 NA other downstream 59758 28844193 ~ 28846421 (-)
G31776 LOC107712874 other downstream 540983 28364025 ~ 28365196 (-)
LOC122342472 znf384l,LOC107665159,LOC107752514 other downstream 718922 28181566 ~ 28187257 (-)
LOC122342471 si:dkeyp-113d7.10,LOC107753946,LOC107666338,LOC107563029,LOC107727707,LOC107549831 other downstream 775799 28120247 ~ 28130380 (-)
eif1 eif1b,LOC107549864,LOC103043673,LOC107666344,LOC107665169 other downstream 838417 28065297 ~ 28067762 (-)

Expression


Co-expression Network