itfg2 (itfg2)


Basic Information

Item Value
gene id itfg2
gene name itfg2
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 8962606 ~ 8970594 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236012.1
cgaATCCCGGTCACGTGCTTTTGTTTGTACTGGACGCGAAATGCAGCCGAAATATGATTAGTCTCAACTGCGGTTGAATACGTTTTAATCGTTAGTCTTGTGGCGCGCAGAGCCGAGGGGTCATGCGCTCGGTCAGTTACGTGCAGCGCGTGAGTTTGGACTTCACAGGAACTATCTTTCCTCACGCCATCTGTCTTGGAGATGCAGATAACGACTCCTTGAATGAGCTGGTGGTGGGAGACAGCAGTGGCAAGCTGTACGTTTATAAAAGTGATGACTGTAAGCCCTGGGTCACGCGGACATGTGTGGGCATGTTAACATGCGTAGGAGTGGGGGATGTGTGCAACAAAGGAAGGAACATCGTCGTGGCTGTGGGAGCGGAGGGCTGGTTTCATCTGTTTGATATCAGCGCGGCTGCAGCCAAGTCGGACTCCTCGAGTCAGCAGGACGGTTCGATCGGGGACGAGCAGAAGCCCACTTACACCCAGCACATCCCCGCTAACACCAAAGTGATGCTCATCAGTGATATCGACGGAGACGGGCGCTGTGAGCTTGTGGTTGGCTACACGGACCGGGTGGTGCGGGCCTTCAGATGGGAGGAACCCTCCGATGCATCGGATTTGAGCTCCGGTCAGCTGGTCTTGCTGAAGAAATGGCTTCTGGAGGGTCAGGTCGACAGCCTCTCGGTTAACCCCAGTCCGGAAGGTCTGCCTGAACTAATGGTGTCTCAGCCCGGCTGTGGCTACGCCATCCTCACGTGTTCTTGGACACAAGAGGGCGCTGCGGGGCCTGGGGAAGATCACGCAGCAACTCCTAGCAGGGAGGGCTCTTCCAGAGACGTCGTCCTGCATCTTACCACGGGACGCATCCATAACAAGAACGTGTCCACTCATTTGATAGGCAGCATTCGCAGAGgtTCTAAGGATGATTCGTCTAAAGGTGGCTTGTTTGCTCTCTGTACTCTGGACGGAACGCTGAAGCTCATGGACAGCTCTGAGAGGCTCTTGTGGTCCGTGCAGGTGGATCACCAGCTTTTTGCCCTCCAGAAGCTGGATGTCACCGGTGACGGGAGAGAGGAAGTGGTGGCCTGTGCCTGGGACGGCCAGACGTACATCATCGATCACGCACGTGTGGTGGTCCGTTTCCAGTTTGATGAAAACGTGAACGCATTCTGCGCCGGCCAGTATGCATGTAAAGACGGGAGGAACAGCCCCTGCCTGGTCTACGTGAGCTTTAACCATAAGATCTACGTGTACTGGAGGGTGGAGCTGGAGAGGATGGAGCCCACCAACCTGCTGAGTGTGCTGGAAGAGAGACCCGAGTATCCAGACCTGCTTCACAGACTGGGAGTGGGTGAGTGGACGTCTGTCCGTGTGTGTGATCGTTTGCGGAGCTCAGCGTTGCTCACAATCGCCATCTGGGGGAACCGGGGAAAGAGAAGGCACGTATAAGCGAAATCAAGTTTCAGAATACATCTATAACTGTAAGCACACATCCACGAAGCGCACGCCAATCCATTGTGATGAAACACTCGCATTTTAGCGTTGAAACTATGACCGATTACGGTTAAGACCGATAGCATTACGAATCAATGCTCATTTAGCTTTGAACACTAATCTAGAACTGTACTGAGTAAAATGACATGCTGGCATACAGAAAGATCTCCGGGATAAAAATAGCCCTGCGCCGATGCCGTTCTTCTGAAAGCGTTTTAAGGGGCTTAAGAGACTCTTGAACTCGCGTTCTTGTGCCGTATCATTTCAATTTCTTGTCACGCCGCACGATTTGTCAAAACGTTTGACTGGGCCGAAAGGGGGGTTCGGGTCACTCCGCTCACTCAGACTGCTGCCACATGCGCAGTTGTTAATGAAAAGCCAGCTTGACTTCCTGGGGCCGCCGTTAATTATTCATCTTCTGGGTCTGATGTGCTCCCACAACGTGATTTTCAAAGCGTGATTAGCTTACCGTGCCACGGGACGCAGCCTCTCTGAACGCCTGCAGGTGAGAGGCATCAccggagatggagagagagagctggtAGACGAATTTGTGCTGATGAACTGTGGGTGTGGATTCATGCCAAAGAGGCACGGAAGGTCAATGAGTTTACTAATAAATGGGTGATATGTTAggtttttagtgctgtcaagtgattaTGCACAcgcatattatttttacatatgtgtgtgtgtgtgtgtatacacacgtacatgcatgcatgcatatgtttcaggaaaatatgtta
>XM_043236013.1
gaATCCCGGTCACGTGCTTTTGTTTGTACTGGACGCGAAATGCAGCCGAAATATGATTAGTCTCAACTGCGGTTGAATACGTTTTAATCGTTAGTCTTGTGGCGCGCAGAGCCGAGGGGTCATGCGCTCGGTCAGTTACGTGCAGCGCGTGAGTTTGGACTTCACAGGAACTATCTTTCCTCACGCCATCTGTCTTGGAGATGCAGATAACGACTCCTTGAATGAGCTGGTGGTGGGAGACAGCAGTGGCAAGCTGTACGTTTATAAAAGTGATGACTGTAAGCCCTGGGTCACGCGGACATGTGTGGGCATGTTAACATGCGTAGGAGTGGGGGATGTGTGCAACAAAGGAAGGAACATCGTCGTGGCTGTGGGAGCGGAGGGCTGGTTTCATCTGTTTGATATCAGCGCGGCTGCAGCCAAGTCGGACTCCTCGAGTCAGCAGGACGGTTCGATCGGGGACGAGCAGAAGCCCACTTACACCCAGCACATCCCCGCTAACACCAAAGTGATGCTCATCAGTGATATCGACGGAGACGGGCGCTGTGAGCTTGTGGTTGGCTACACGGACCGGGTGGTGCGGGCCTTCAGATGGGAGGAACCCTCCGATGCATCGGATTTGAGCTCCGGTCAGCTGGTCTTGCTGAAGAAATGGCTTCTGGAGGGTCAGGTCGACAGCCTCTCGGTTAACCCCAGTCCGGAAGGTCTGCCTGAACTAATGGTGTCTCAGCCCGGCTGTGGCTACGCCATCCTCACGTGTTCTTGGACACAAGAGGGCGCTGCGGGGCCTGGGGAAGATCACGCAGCAACTCCTAGCAGGGAGGGCTCTTCCAGAGACGTCGTCCTGCATCTTACCACGGGACGCATCCATAACAAGAACGTGTCCACTCATTTGATAGGCAGCATTCGCAGAGgtTCTAAGGATGATTCGTCTAAAGGTGGCTTGTTTGCTCTCTGTACTCTGGACGGAACGCTGAAGCTCATGGACAGCTCTGAGAGGCTCTTGTGGTCCGTGCAGGTGGATCACCAGCTTTTTGCCCTCCAGAAGCTGGATGTCACCGGTGACGGGAGAGAGGAAGTGGTGGCCTGTGCCTGGGACGGCCAGACGTACATCATCGATCACGCACGTGTGGTGGTCCGTTTCCAGTTTGATGAAAACGTGAACGCATTCTGCGCCGGCCAGTATGCATGTAAAGACGGGAGGAACAGCCCCTGCCTGGTCTACGTGAGCTTTAACCATAAGATCTACGTGTACTGGAGGGTGGAGCTGGAGAGGATGGAGCCCACCAACCTGCTGAGTGTGCTGGAAGAGAGACCCGAGTATCCAGACCTGCTTCACAGACTGGGAGTGGATATCAGTGACACGGTAGCGGTTCGGAAACTCATCGGAGACGTGCTCTACAGGAACATAGCGAAAGACGACGCAGAATGAATCACGACTCTTGCACACTCTTTCATTTCTGTAAATAGACGTGTAATAAAAGCACATCATGATA
>XM_043236014.1
GGTCAGTTACGTGCAGCGCGTGAGTTTGGACTTCACAGGAACTATCTTTCCTCACGCCATCTGTCTTGGAGATGCAGATAACGACTCCGTAAGTTATACCGAGCGTGTGTGACAGATGCGACGTTATCACTATAATCACCAGTTGAATGAGCTGGTGGTGGGAGACAGCAGTGGCAAGCTGTACGTTTATAAAAGTGATGACTGTAAGCCCTGGGTCACGCGGACATGTGTGGGCATGTTAACATGCGTAGGAGTGGGGGATGTGTGCAACAAAGGAAGGAACATCGTCGTGGCTGTGGGAGCGGAGGGCTGGTTTCATCTGTTTGATATCAGCGCGGCTGCAGCCAAGTCGGACTCCTCGAGTCAGCAGGACGGTTCGATCGGGGACGAGCAGAAGCCCACTTACACCCAGCACATCCCCGCTAACACCAAAGTGATGCTCATCAGTGATATCGACGGAGACGGGCGCTGTGAGCTTGTGGTTGGCTACACGGACCGGGTGGTGCGGGCCTTCAGATGGGAGGAACCCTCCGATGCATCGGATTTGAGCTCCGGTCAGCTGGTCTTGCTGAAGAAATGGCTTCTGGAGGGTCAGGTCGACAGCCTCTCGGTTAACCCCAGTCCGGAAGGTCTGCCTGAACTAATGGTGTCTCAGCCCGGCTGTGGCTACGCCATCCTCACGTGTTCTTGGACACAAGAGGGCGCTGCGGGGCCTGGGGAAGATCACGCAGCAACTCCTAGCAGGGAGGGCTCTTCCAGAGACGTCGTCCTGCATCTTACCACGGGACGCATCCATAACAAGAACGTGTCCACTCATTTGATAGGCAGCATTCGCAGAGgtTCTAAGGATGATTCGTCTAAAGGTGGCTTGTTTGCTCTCTGTACTCTGGACGGAACGCTGAAGCTCATGGACAGCTCTGAGAGGCTCTTGTGGTCCGTGCAGGTGGATCACCAGCTTTTTGCCCTCCAGAAGCTGGATGTCACCGGTGACGGGAGAGAGGAAGTGGTGGCCTGTGCCTGGGACGGCCAGACGTACATCATCGATCACGCACGTGTGGTGGTCCGTTTCCAGTTTGATGAAAACGTGAACGCATTCTGCGCCGGCCAGTATGCATGTAAAGACGGGAGGAACAGCCCCTGCCTGGTCTACGTGAGCTTTAACCATAAGATCTACGTGTACTGGAGGGTGGAGCTGGAGAGGATGGAGCCCACCAACCTGCTGAGTGTGCTGGAAGAGAGACCCGAGTATCCAGACCTGCTTCACAGACTGGGAGTGGGTGAGTGGACGTCTGTCCGTGTGTGTGATCGTTTGCGGAGCTCAGCGTTGCTCACAATCGCCATCTGGGGGAACCGGGGAAAGAGAAGGCACGTATAAGCGAAATCAAGTTTCAGAATACATCTATAACTGTAAGCACACATCCACGAAGCGCACGCCAATCCATTGTGATGAAACACTCGCATTTTAGCGTTGAAACTATGACCGATTACGGTTAAGACCGATAGCATTACGAATCAATGCTCATTTAGCTTTGAACACTAATCTAGAACTGTACTGAGTAAAATGACATGCTGGCATACAGAAAGATCTCCGGGATAAAAATAGCCCTGCGCCGATGCCGTTCTTCTGAAAGCGTTTTAAGGGGCTTAAGAGACTCTTGAACTCGCGTTCTTGTGCCGTATCATTTCAATTTCTTGTCACGCCGCACGATTTGTCAAAACGTTTGACTGGGCCGAAAGGGGGGTTCGGGTCACTCCGCTCACTCAGACTGCTGCCACATGCGCAGTTGTTAATGAAAAGCCAGCTTGACTTCCTGGGGCCGCCGTTAATTATTCATCTTCTGGGTCTGATGTGCTCCCACAACGTGATTTTCAAAGCGTGATTAGCTTACCGTGCCACGGGACGCAGCCTCTCTGAACGCCTGCAGGTGAGAGGCATCAccggagatggagagagagagctggtAGACGAATTTGTGCTGATGAACTGTGGGTGTGGATTCATGCCAAAGAGGCACGGAAGGTCAATGAGTTTACTAATAAATGGGTGATATGTTAggtttttagtgctgtcaagtgattaTGCACAcgcatattatttttacatatgtgtgtgtgtgtgtgtatacacacgtacatgcatgcatgcatatgtttcaggaaaatatgttaa

Function

symbol description
itfg2 Predicted to be involved in regulation of TOR signaling. Predicted to be part of KICSTOR complex. Orthologous to human ITFG2 (integrin alpha FG-GAP repeat containing 2).

NR:

description
PREDICTED: integrin-alpha FG-GAP repeat-containing protein 2 isoform X2

GO: NA

KEGG:

id description
K23296 ITFG2; KICSTOR complex protein ITFG2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236012.1 True 2245 mRNA 0.52 11 8962606 8969736
XM_043236013.1 False 1496 mRNA 0.54 12 8962607 8970594
XM_043236014.1 False 2170 mRNA 0.52 11 8962736 8969737

Neighbor

gene id symbol gene type direction distance location
recql recql,LOC107695875,LOC107590167,LOC107725624,LOC107587911,LOC107744919,LOC107664885 coding upstream 1373 8953947 ~ 8961233 (+)
nup37 nup37,LOC107590136,LOC107695872,LOC107664874,LOC107744917 coding upstream 96688 8855404 ~ 8865918 (+)
pmch pmch,LOC107659836,LOC107591230 coding upstream 119356 8841744 ~ 8843250 (+)
igf1 igf1,LOC107659835,LOC107725558,LOC107664880 coding upstream 129974 8821730 ~ 8832632 (+)
bcat1 bcat1,LOC107590116,LOC107725514,LOC107664876,LOC107744911,LOC107587341 coding upstream 147591 8804192 ~ 8815015 (+)
cwf19l1 cwf19l1,LOC107695878,LOC107725658,LOC107744920,LOC107664857 coding downstream 39568 9010162 ~ 9015256 (+)
gnptab gnptab,LOC107695880,LOC107664853,LOC107725516,LOC107725515 coding downstream 53883 9024477 ~ 9041856 (+)
LOC122343441 LOC107553872,LOC107593900 coding downstream 346986 9317580 ~ 9323622 (+)
LOC122343440 NA coding downstream 354306 9324900 ~ 9333048 (+)
ncaph2 ncaph2,LOC107725678,LOC107590292,LOC107732965,LOC107553878 coding downstream 385373 9355967 ~ 9373818 (+)
G27301 NA non-coding upstream 9484 8952922 ~ 8953122 (+)
G27162 NA non-coding upstream 209757 8752438 ~ 8752849 (+)
G27121 NA non-coding upstream 457510 8471675 ~ 8505096 (+)
LOC122343529 NA non-coding upstream 585297 8374654 ~ 8377309 (+)
G27084 NA non-coding upstream 631304 8278559 ~ 8331302 (+)
G27345 NA non-coding downstream 83427 9054021 ~ 9057297 (+)
G27347 LOC107590965,LOC107695883 non-coding downstream 87274 9057868 ~ 9058292 (+)
G27352 NA non-coding downstream 98337 9068931 ~ 9076136 (+)
LOC122342713 NA non-coding downstream 107424 9078018 ~ 9081866 (+)
LOC122343257 NA non-coding downstream 118161 9088755 ~ 9098978 (+)
ascl1a ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950,LOC106576285 other upstream 72430 8874717 ~ 8890176 (+)
etnk1 etnk1,LOC107725541,LOC107659837,LOC107694683,LOC107590048,LOC107744908 other upstream 414604 8533816 ~ 8548002 (+)
spx spx,LOC107589995,LOC107744902,LOC107694690,LOC107596170,LOC107725633 other upstream 470668 8487911 ~ 8491938 (+)
stmp1 NA other upstream 478775 8482890 ~ 8483831 (+)
G27079 NA other upstream 713383 8247912 ~ 8249223 (+)
washc3 ccdc53,LOC107695862,LOC107590199,LOC107596601,LOC107744922,LOC107664856 other downstream 45247 9015841 ~ 9018333 (+)
apaf1 apaf1,LOC107744928 other downstream 68044 9038638 ~ 9221046 (+)
G27360 anks1b other downstream 192553 9163147 ~ 9227212 (+)
cfap54 cfap54,LOC107695893 other downstream 410948 9381542 ~ 9395757 (+)
wnt7ba wnt7ba,wnt7b,LOC107591249,LOC107695867,LOC107725526,LOC107732964,LOC107664847,LOC103028473 other downstream 533486 9504080 ~ 9522033 (+)

Expression


Co-expression Network