LOC122342237


Basic Information

Item Value
gene id LOC122342237
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18967261 ~ 18970537 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236047.1
TGAGCTTTCCCTATTCCTCTTCCAAATTCTTCCACTGTTGTGTCTCTATTCCACCCTACTCATACAATGTCTTTCAACATCCCTAGCCTCATTACCACTCGCACTTCTTGTATCCGGCGTCATCGGAGGCGCAactacaataatatgcatactattCCCACATCGTTTACCACATCACACTCTTTCTCCATCGGCCTTTGGAATTGCCAGTCTGCTGTAAAAAAGACTGACTTCATCACAGCCATCACAGAACATTCCAATCTAAGTATTCTAGCACTTACCGAAACCTGGATTAAACCAGAGGACACTGTCACTCCAGCTGCCCTCACTGCCAACCACACTTTCACTCATTCCCGCACTTCTGGGAGGGGTGGAGGTACTGGTCTGCTCATATCAAAGAATTGGAAGCACAGCCAAATACAGACCCTCAATACAAACTCCTCTTTTGAATCACACGCCATTACTGTCACCCACCCTTTTAAAATTCACCTGATTGTTCTGTATCGCCCCCCAGGGCACCTCGGTAACTTCATTAATGACTTGGATGTGCTGCTCTCTGCTTTTCCAGAGGATGGCACTCCTCTGGTACTGCTAAGAGATTTCAACATCCATGTAGATAAGAGTCTGGCCTGCGACTTCCACAGTCTATTGGCGTCTTTTGATCTCAGCCGTGTATCCACCACTGCCACGCACAAATCAGGTAATCAGTTGGACCTCATCTACACTCGAAACTGCTCTACTCATCATGCCCAGGTAACACCACTGCACACATCTGACCACTTCCTGATTACATTCAACACCACCCTAACCTCTTCCAACATAACACCTAACCCTCCGCTGGTCACTTTTCGCCGTCACTTACGCACGCTCTCGTCAACCTGTCTTTCCTCTGCGGTGTCACTGTCACTCCCTCCTCCTAACCGGTTCTCTTTACTAGATGTTAACACTGCTACCAATACCCTCTGCTCCACGCTAACATCCTGCCTGGACTCTTTCTGTCCTCTAACAACCAAACCTGCCCGGCCAACTCCCTCTGCCCCCTGGTTatctgatgttctccgtgaaCATCGCTCCAAACTCAGAGCTGCGGAAAGAAAATGGCGTAAGACCAAGGATCCATCGGATCTCTGTTTTTAtcagtctcttctctcctcattttctaataatgtctCCACTGCTAAACGTAACTATTACCAAACAAAGATTAACAACTCCTCTGACTCACGGagcctctttaaaacattctctgctcttctctgcccACCTGTCCCCCCACCATCGTCATCCTTAACCTCTGATGATTTTGCTcgttttttcattaacaaaaccacTAAGATCAGCAATCAATTTCCTGCTGCTCCTCGCCTTACGCACATCAAACCACAGCACCCCAACACATTCTCCACTTTTTCCCTCCTCTCTGAAACAGAGGTATCAAAAATCGTCCTTGCCACGAATGCCACAACCTGCCCTTTAGATCCCATCCCTACTAACATCTTTCAGGCTATCGCTCCCTCCGTCCTCCCTGCACTCACCCACATTATCAACAACTCTATCTACACTGGTACATTTCCCTCAGCTTTTAAGGAGGCTCGTGTTGCTCGTGTTGCCCCTCTCCTTAAAAAACCCACACTTGACCCTGAGCtcattgaaaattacagacctgtATCTCTCCTCCCATTCATGGCTAAGACACTAGAGAGTGTTGTCTTTAACCAAATCTCCTCccctggagtgcctcagggctcagtacttgggccactgcttttttccatctacatgacatcactgggttctgtctttctgaagcatggcttctcatatcactgctacgctgacgacactcaactccatctctcctttcaaccagacgatcccaccgtttctgcacgtatttctgcgtgcctaaacgacatctcagtctggatgaaggatcatcacctgcagttaaacctcacaaaagCAGAGCTCCTCGTTTTTTCCGCCGatcccaacatacagcacaaactatcttttcagctaggctcggctactgcatcctcgtctaggtcagctaggaaccttggagtgatcattgacgaccagctaactttcactgagcacatttcaaaaactgctcgatcttgtaggtttgtgctgtacaacatcaggaaaatcagactaTCAGAACatgctacacagatcctcgtccaggcactagtcctgagtagactTGACTACTGCAatgccctccttgctggcctcccagcctatacaaccagacctcttcagatggtccagaatgcagcggcaagggtggtcttcaacgaaccaaggagggcccacgtcacacctctcttcattagtttacactggcttcctatagatgcccgcatcaaattcaaatccctgatgctggcctacaggacaatcacaggctccgctccctcgtacttacactcactaattgaatcatatgttccctccaggtgcctacgctctgcaaacgaaaggcgtcttgcagtgccttcaccaaaaggtgcaaaatcactcttgcgcaccttcacctggtctgttcctcattggtggaacgatctgcccgttgccactagggcagcagagtcactagcaatcttcaaaaaccaactcaaaactcatctttttcgctTACACTTGCGTGATACTGGTGCCATGCAAACCATTGTGGCTAAAGACGCGTTTCCTTTTTCTGATCAAACCTTCTGTGGTAGTTATGTTTTGATACGAGGTATTGGAATGAAGACTGTCAGAGTTCCCTTGCATCAGATTTATTTGCGCTCCGAGTTGTTTACAGGAATAATTAAAGTGGGAGTGCGGGAAAATTTGCCTGTTTGCGGGGTAAAACTTATTCTTGGTAACGATGTGGCCGGTGGAAGGAAATGGCAAGTGAACGAAAAATGGCTTATTATATGGATAACGGATTACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236047.1 True 2946 mRNA 0.47 5 18967261 18970537

Neighbor

gene id symbol gene type direction distance location
LOC122343034 NA coding downstream 39881 18923263 ~ 18927380 (-)
LOC122342975 LOC107571373 coding downstream 114635 18843947 ~ 18852626 (-)
LOC122342979 LOC107694482,LOC107578888 coding downstream 126545 18836618 ~ 18840716 (-)
scgn scgn,LOC107747999,LOC107663245,LOC107693759,LOC107757885 coding downstream 298452 18662858 ~ 18668809 (-)
LOC122342949 NA coding downstream 362951 18594319 ~ 18604310 (-)
LOC122343103 NA coding upstream 44548 19015085 ~ 19017227 (-)
LOC122342247 NA coding upstream 500896 19471433 ~ 19474667 (-)
LOC122342252 LOC107695509,LOC107701922 coding upstream 692361 19662898 ~ 19677320 (-)
LOC122342256 NA coding upstream 781877 19752414 ~ 19754123 (-)
LOC122343058 NA coding upstream 1010642 19981179 ~ 19990088 (-)
G29796 NA non-coding downstream 197 18966776 ~ 18967064 (-)
LOC122343185 NA non-coding downstream 9213 18956218 ~ 18958048 (-)
LOC122343202 NA non-coding downstream 106091 18857887 ~ 18861170 (-)
G29753 NA non-coding downstream 109540 18857474 ~ 18857721 (-)
G29741 NA non-coding downstream 160593 18800904 ~ 18806668 (-)
G29806 NA non-coding upstream 75280 19045817 ~ 19053531 (-)
LOC122343199 NA non-coding upstream 255437 19225974 ~ 19226499 (-)
LOC122343183 NA non-coding upstream 362385 19332922 ~ 19333726 (-)
G29829 NA non-coding upstream 610819 19581356 ~ 19581782 (-)
G29830 NA non-coding upstream 686463 19657000 ~ 19660386 (-)
G29787 NA other downstream 35386 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 49728 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 64709 18898807 ~ 18902552 (-)
LOC122342944 LOC107581743 other downstream 231621 18693002 ~ 18735640 (-)
LOC122343054 NA other downstream 305608 18655244 ~ 18661653 (-)
LOC122342243 NA other upstream 363192 19333729 ~ 19337492 (-)
LOC122343146 NA other upstream 1030451 20000988 ~ 20009712 (-)
G29902 NA other upstream 1266600 20237137 ~ 20238554 (-)
G29906 NA other upstream 1310569 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 1887886 20858423 ~ 20864406 (-)

Expression


Co-expression Network