LOC122342252 (LOC107695509,LOC107701922)


Basic Information

Item Value
gene id LOC122342252
gene name LOC107695509,LOC107701922
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 19662898 ~ 19677320 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236058.1
ATGGCATACCaggaggagctattgaaaggttaccaGTCCCAATTGAATCAACTGCAGTTGGTGAACGAACACCTCACCCAGTACATTCGGAATCTACCACCTACTACGTCTTCTATgtttgacggttctgctgaaCGATGCAAAGGTTTCATTCGCCAGAATGCGAGCACCGGCATCGTCTTCAActatgcttttactgtggagaaggAAAACATTATCAGGCTGACTGTCCTCACAGACCCACCACCGCCAACCGGgatTAAGACCATTAATGACGATGACATAGGAAGGGGCGTTTCTCATAGAACCAGGACTCttactctccaggttggcatgttCCACAAGGAAGCCATTACGCTCTATATTgttgattcatccaaatgcttcgCTGTATCACCAAAGAACTGCCTCACCACCAGTATAGAGAGTCCAGATGATCAAAGGAGAGTCAAGATACCAGTATGCTACAGTCAACTTTCAGAAGTGTTTAGCAAATCAAgggcaacagaattaccacctcaccgaccatgggactgtgcgattgacctcctacctaacgccatgccacccaaaagcaAGGTATACCCGTTGTCACTCACTGAAAGCCAGActatggaggaatatattaatgaggctcttagctttgggttcattagaccTTCCACTtcacctgcagcagctggattcttctttgtgggtaagaaggatggaggcttgcgcccatgcatcgattatcgaggCCTAAATAACGTCACAGTCAAGTTCCGATATCCCCTACCTTTAGTTCCATCAGCTCTAGAACAACTACGTGAGGCAAAGGTGTATGCTAAGTTAGACCTCCGTagtgcctataacctgataaggatcaaggagggagacgagtggaagactgcgttcatgacgactagagggcactatgagtatctcGTTATGCCGTATGGGCTAGCTAATGCTCCAGCTGTATTCCAGTCTTTTATCAACGAGATCTTCAAGGACATCCTGAACACATACGTGGTGGCTTATATTGATGACATCCTCATCTACTCAAAGAATGAAGCCGATCACATTGGACATGTCAAAGAGGTTCTTTCCAGGTTACTAAAACACCAGTTGTTTGtcaaggaggagaaatgtgagtttcatgtgtcTCAAACTTCGTTTCTAGGTTACCAAATCAGTCACCAGGGAGTGAGGATGGACAAGGACAAGGTTAAGGCAGTTACGGAGTGGCATCAACCCACTACTGTCAAGGAGCTACAAcggtttctagggtttgcaaatttctacaGACGCTTTATCCGAAACTATAGTACCgttgctgcaccactaacctctctcttaaagggaaagccgTCCAAGCTGAGATGGAATGAGGGAGCAATTAAGGCATTTTCCAACCTCAAGGaacgtttcaccacagccccaattctcaaacatcctgatcctGAACTACCGTTTATCATAGAAGTGGATGCATCGGACTGCGGAGTTGGAGCTGTTCTCTCACAGCGTCACGGTCAACCAGGGAAACTTTACCcttgtgctttcttttccagaaaactaacagcagcagagagaaatTATGATGTGGGAAACAAGGAGCTGTTATCCATGAAAGCGGCCattgaggagtggagacactggctagaaggagcagtgcacccgttccaagtcatcacggatcacaaaaaccttgaatacatcaagggagctaaaaggctgaaccccagacaggcaagatgggcactgttctttatgcatttttaattcactgtcACCCATCGTCCAGGTTCCAAGAACAGTAAGGCTGACGCACTGTCCCGAAGATATGACGCACCACTGAAGGAGGGAGTCCCGGATAATATTCTGCCACCCACGGTAATCCTGGCACCAGTGTCCTGGGATATCATGGAGGAGCAGCAGAGGGAATTGCAGCACGAACCAGCACCCCCTCAATGTCCCACCATTATGTACCATCTACGATACGCCAACGCATCCTACAATGGGATGTCAGTCCTGTCATCTTTGCTGGACATTTTAGATGCCAGTTCATCCAATTCCTTCCTCTGCTCCACTAATCCTGGGTCCTCTCCACGGTCAATGCCATCTTTGGCCAGTAAAACGGGACCTAGCCAGACATCTGGGGAAAAACTGGAAGACCGTGTCTTCCTCCTGCTGGAACTCTTGAGAGGGGGATATCCGATGCTGTGCGGATCAATATTGTCAGTTCTGCAAAAGGAGGTGGGTCTGCTTTCTTTTCTCAAGCTGCAGGTCGGCTATCAGGGCGTCGTCCCAACAGCCTCTGCAAAACTGCCTCACCAAACAGCGGTTTCGTTCACCCTCGGCAACACCTCCACGCCTGATGGTTGTGCTCAGGATCACATGCAATCTGTGGAGGGTGAGTCAGTATTTCTGCAGCAACTTCTGTTCTCTGTAGAGTTGGGGATTTTTGCCCTGAATGTTCAGGAGTCAGCACATTTGATTAACAAGGGTGTTGCTCCACCTCAGTGTCCATTCTGGCTGTTGAGtgaactgagtgagagggtgtgggatagtGCTCATGTACGACTTCAAAGAGCGATCAGGTATCAGGAGATTCAAGGTAACCGCCAAAGACGCCCACATCccccatatcaacctggacaaagggtctggctcgACGAGGACATCAAGATGCGGCTGCCCAGTAAGAAGCTAAGCCCAAGGTATGTTggaccattcaagataataaaacaagtgaatGATGTCACATACCAACTTGAACTACCTACTAATTATCgtatatctccatcctttcacgtatccctcctcaaaccggtccacccGGGAGCTGACCCTGGCCCtgaagccccagaaccaccgccgccACTTGAGATTGACGGGAACCCCGCATATCAAGTGAGTGGACTACTGGACTCGCGGAGACTGGGGGGTCGGCTCCagtacttggtggactgggagggttatggaccagaggagagatcctgggtagccgctcaggacattttggacccatcccttatagaggagttccacagagccagacccgatcgtCCAGCACCTCGCCCTAGGGGAAGACCACGTAACCCACAACGAGATCCATCCCAGGATCAACCATGGCCACGAGAACAACCACGAAACCAAtcacgagattctgcccaggaccaaccacgaccacgtGGACGCCCACGAAATCAATCAcaagattctgcccaggaccaaccacgaccacgtGGACGCCCACGAGGACGTCCACgaaaagctccaggagtcgctcctaAAAAACTTGCACTGATgtaa

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236058.1 True 3300 mRNA 0.49 13 19662898 19677320

Neighbor

gene id symbol gene type direction distance location
LOC122342247 NA coding downstream 188231 19471433 ~ 19474667 (-)
LOC122343103 NA coding downstream 645671 19015085 ~ 19017227 (-)
LOC122342237 NA coding downstream 692361 18967261 ~ 18970537 (-)
LOC122343034 NA coding downstream 735518 18923263 ~ 18927380 (-)
LOC122342975 LOC107571373 coding downstream 810272 18843947 ~ 18852626 (-)
LOC122342256 NA coding upstream 75094 19752414 ~ 19754123 (-)
LOC122343058 NA coding upstream 303859 19981179 ~ 19990088 (-)
LOC122343115 NA coding upstream 313364 19990684 ~ 19994596 (-)
trnal-aag NA coding upstream 383269 20060589 ~ 20060671 (-)
trnal-cag NA coding upstream 384032 20061352 ~ 20061432 (-)
G29830 NA non-coding downstream 2512 19657000 ~ 19660386 (-)
G29829 NA non-coding downstream 81116 19581356 ~ 19581782 (-)
LOC122343183 NA non-coding downstream 329172 19332922 ~ 19333726 (-)
LOC122343199 NA non-coding downstream 436399 19225974 ~ 19226499 (-)
G29806 NA non-coding downstream 609367 19045817 ~ 19053531 (-)
G29833 NA non-coding upstream 7295 19684615 ~ 19685706 (-)
G29832 NA non-coding upstream 8716 19686036 ~ 19692580 (-)
G29839 NA non-coding upstream 52582 19729902 ~ 19730382 (-)
G29840 NA non-coding upstream 53116 19730436 ~ 19731117 (-)
G29841 NA non-coding upstream 53941 19731261 ~ 19786160 (-)
LOC122342243 NA other downstream 325406 19333729 ~ 19337492 (-)
G29787 NA other downstream 731023 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 745365 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 760346 18898807 ~ 18902552 (-)
LOC122342944 LOC107581743 other downstream 927258 18693002 ~ 18735640 (-)
LOC122343146 NA other upstream 323668 20000988 ~ 20009712 (-)
G29902 NA other upstream 559817 20237137 ~ 20238554 (-)
G29906 NA other upstream 603786 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 1181103 20858423 ~ 20864406 (-)
LOC122343098 NA other upstream 1371537 21048857 ~ 21053725 (-)

Expression


Co-expression Network