LOC122342276


Basic Information

Item Value
gene id LOC122342276
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20505411 ~ 20515629 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236074.1
TGAGCGTTGATATAAATTCTGAAACAGGTGCGAGTGTAAATGCTCCTCTATTGACTGCGAACACCTTCACAGGACCAGTAACAATTTATGGCTCAAATGCTGAAGGAAACGATAAACAGAAATCCTCAGAGATGCCAGAggaacacagagaaaaacaagagctGCAAAGCTTTTTTGAaactcatgaaaaaaaaatgaagaagaaaacagaatttatgtTTGAGGGCAACGAAGACAAGGAAGCACAACTCAAGGCTGTTTACACAGAACTGTTCATCACAGAGGGAGATATGAAAGATGTCAATCACGAACATGAGATTCTGAAGATCGATGATGCCTTcaagagcaaaaaaacacagaacaaaccaatcaaatgtaatgatatatttactgaactgagaaaaaacaatgagaaaaaGATTGTTCTGACTAAAGGAGttgctggcattggaaaaactgtctctgtgcacaagttcatcctggactgggctGAAGGAAAGGCCAATCAAGATATACACTGTGTGTTCCTGCTTTCATTCAGAGAGATTAACTTAATGAAAAATGAAGATTTCAGTCTCCACAAGCTTCTGCTGGAATTTTATCCTGAACTGAAGGACCTGGGGGGAAAAAGGCTATATACGGAATGTAAgatagcatttatatttgatggacttgatgagAGTCGCCTGTCtctaaattttaaaagtagatcACTGAACACTGTTGAGGAAAGTGCATCTGTAGATGTGATTTTTACAAGTCTGGTCAAAGGAACTTTGCTTCCATTAGCTCTTGTCTGGGTGACATcacgaccagcagcagccaatcagatccctccTCAGTATGTGGGGTTGTTCACAGAGGTGCGAGGATTCACTGACCAACAGAAGGAGGAGTACTTCAGAAAGAGATTCACAGATGAGAGTCTGTcctccagaatcatctcacacattaagACGTCTCGTACtctctacatcatgtgccacattcctgtgttctgctggatcacagccacagtacttcaggatattctcactgagaagaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgCTGATACAGATGAACATGAAGAGCCAGAAATATGATGGACAAGCAGAACGAGAACGTATAAAGCTcttacattcaaataaagaaatgattttaaaactaGCCAAGCTAGCATTTGAACAGCTGAAGCAGGAACACATTGTGTTCTATGAGAAAAATCTGAAAGAATGTGACATTGATGTGAGTAAAGACACAGAGTTTACAGGAATGATCGCTGAGATCTTTAAGAAGGAAGATGGACTTCATGAGACAAAGGTCTTCTACTTTGTGCATCTGAGTGTTCAAGAGTTTCTTGCTGCCGTGCATGTGTTCTTCTGCTACCTGAACAAGGACATGCAGGagcttcagtttttctttgagTCAGAAGAAAACATCACATTGTATAACCTACTGCAAAAGGCTATTGATAAAGTCATGAAGAGTCAGAGAGGACATCTGGATCTGTTCCTCCGCTTTCTGATGGGAATATCACTGAAATCCAGTCAAAACCTGCTCAGAGGCCTGTttgaagaaaacacagaaagcTCCGGAGACACTGAAGACACCACAGAGAACATCAGACAAACAACAGAATACATTAAACGcatacaaaacaagaaaatttCAGATGAAGCTCTAGTGAACCTATTCTACTGCTTACTTGAGCTCAAAGATAATTCATTATATGAGGAGATCCAGAGTTATCTCAGTTCAGAAGGACATCCAGAAAAAGATCTCTCATCTTCAATGTGCACAGTGCTGACCTACATACTGCTGACGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAAAACAAGCAGACTACAAGAGACTCCTTCCAGCtgtgagatgctgcagaaaGGCTCTATTTGATGGCTGTGGTCTTGATGAAATATGCTGTGAAACTCTGTCTTCTGctctacaatcatcaaactctCATCTGACAGAACTGGACCTGAGTAGAAATCACCTGCAGGATTCGGGAGTAaagctgctttctgatggactgaagagttcaCACTGTCGACTTACCATACTGAGCAGACTAATCAGGGACACCCAGATTTCCCTCTCCCCAGAAACTTACTTCAGCTCTTCTGGGGGAACACTGAGAcactcccaggccagccgagagacatctCCAGCATGTCcaaggtcttccccggggcctcctcctgGTGGAACATGCCTggaacacctccattgggaggcgtccgggaggcgtCTGGAACAAATGCCCGAGCTCCTCCTGAGTGACAgagctcctcaccctatctctgaGGGAGCTCCCAGCCACCCTATGGAGAAAACTGATTTCAGCCGCTTGTATCCAGGATCttatcctttcggtcatgacccagaCCTTATCACCAGGGTGAAAccgcttcacacttggctgcaaaccgccccagtgCCTGCAGTAGGTCCTGGTCAGGTGGtagccaacaggacaacatcattCGCCAAAAGCAGAGACGATATCCTGTGgccaccaaaccagaccccctccagTCCctggctgcgcctagaaatcctgtccataaaaataatgaacaagaCTGAGATTCCTAAGActctcactcaaatgtacacacacttcctgatcctTCAGACCAACATCAATCATGAGAAAGACTATGAGAAGAACTTGACAGATGAAGACTTGATCCTCAAACTGGGGAAACTGGCTTTCCAGCAGCTTGTGAAAGGAAACCTGATCTTTTATGATGAAGACCTGAGAGAGTGTGGCATTGATGAAACAGAAGCATCAGTTTATTCAGGACtgtgcactcagatcttcagagaggagcTGGGCTTCTTTCAGGGGAAAGTCTTCAGCTTTGTTCATCTGAGTCTTCAGGAACATCTAGCAGCTCTATATGCGCACCTCTCCTTAACAATAAAGAAGATAAATGTGTTTGACCAAATCCaacaaaaatctttcttttctgtcttcTTTAATGAAATTGGACCTTTATCTGAGCTGCATCAGAGAGCTGTGAACGAGGCTCTACAGAGTAAGAATGGACACCTGGATCTTTTCCTGCGGTTTCTTCTGGGTCTCTCAGTGGAGTCCAATCAGACTCTAAGAAAACTACTGACACAGACAAGAAGCTGCTCCTACAACAAAGAGGAAACAGTTCAGTTCATCAAACAGAAGATCAGGGAGAATCAGAGAAATTCAGAgaaatccatcaatctgttccactTCTTCTTCTCCCCACATCCTGGTTCAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236074.1 True 3326 mRNA 0.43 9 20505411 20515629

Neighbor

gene id symbol gene type direction distance location
LOC122343122 NA coding upstream 28703 20470670 ~ 20476708 (+)
LOC122342275 NA coding upstream 36350 20468226 ~ 20469061 (+)
LOC122342274 NA coding upstream 59275 20443346 ~ 20446136 (+)
LOC122343110 NA coding upstream 113037 20391465 ~ 20392374 (+)
LOC122343026 NA coding upstream 127305 20376410 ~ 20378106 (+)
LOC122343005 NA coding downstream 27503 20543132 ~ 20559014 (+)
LOC122342277 LOC107741474 coding downstream 118255 20633884 ~ 20638611 (+)
LOC122343085 LOC107561645,LOC107566978,LOC107748257,LOC107741456 coding downstream 124513 20640142 ~ 20644792 (+)
LOC122342964 NA coding downstream 139586 20655215 ~ 20677909 (+)
LOC122342951 NA coding downstream 274546 20790175 ~ 20800541 (+)
G29927 LOC107681551 non-coding upstream 7543 20497097 ~ 20497868 (+)
LOC122343178 NA non-coding upstream 43069 20459370 ~ 20462342 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding upstream 62186 20440548 ~ 20443225 (+)
G29918 NA non-coding upstream 63405 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding upstream 66903 20437665 ~ 20438508 (+)
G29945 NA non-coding downstream 115191 20630820 ~ 20631329 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding downstream 129628 20645257 ~ 20645535 (+)
G30005 NA non-coding downstream 269680 20785309 ~ 20785530 (+)
G30003 NA non-coding downstream 364820 20880449 ~ 20882908 (+)
G30024 NA non-coding downstream 394525 20910154 ~ 20975778 (+)
G29921 NA other upstream 136595 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 158687 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 461958 20037933 ~ 20043453 (+)
G29835 NA other upstream 719283 19731262 ~ 19786128 (+)
G29961 NA other downstream 181043 20696672 ~ 20706846 (+)
G30058 NA other downstream 602933 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 653564 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 853014 21368643 ~ 21761181 (+)
G30119 NA other downstream 872564 21388193 ~ 21630120 (+)

Expression


Co-expression Network