LOC122342284


Basic Information

Item Value
gene id LOC122342284
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21071372 ~ 21081090 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236080.1
GAAGAAGAAAGATCCGCACATGATCTGAAAACTTCCGATCAAGACCCAGCTAACTGGAGAAACGAGAAATATCTGCTTCATCTTTATTCATGCCATGAGTTGAAGGATGATGGCGTTTGTTAAAGAGCTGCTCGTGGATTCACTGAAGGAGCTGGTACAAGCTGAACTGAAGGAGTTTCATTGGCGCTTAATGAATGCATATCATAAGCATATCTCAAAGTCTGAAATGGAGAAGGCAGATGTATTAGACACAGTAGATAAGATGGTGGTGTGTTTTGGACCAGATGAAGCTGTGAAGGTCACGGTAGACATCCTGAGAAAGATGAACCAAAATGATCTGGTTGATCAGTTGGTGAAAGAACACAAACAAGCTCAGACTGGGGACAATGTGAATATATCTGTTGAGGTTGGAGagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaacagaatatatttttgaggGCAACAAAGACAATGAAGCACAACTCAAGGCTGTTTACACTGAACTGTTCATCACAGAGGGAGATATGAAAGATGTTAATCACGAACATGAGATTCTGAAGATTGATGATGCcttcaagaacaaaaaaacacagaacaaaccaatcagatataatgatatatttactgaactgaggaaaaacaatgacaaaaagaTTGTGCTGACTAAAGGAGTcgctggaattggaaaaacagtctcCGTGCACAggttcatcctggactgggcaGAAGGAGAATCTAACCAGGATATACACTGTGTGTTCCTGCTTTCATTCAGAGAGATTAACTTAATGACAAATGAAGATTTCAGTCTTCATGAGCTTCTGCTGGAATTTTATCCTGAACTGAAGGACTTGGAGAAATCAAAGCTATATACAGAATGTAAGctagcatttatatttgatggactTGACGAGAGTCGCCTGCCtctaaattttaaaagtagatcACTGAACACTGTTGAGAAAAAAGCATATGTGGATGTGCTCTTTACAAGTCTGGTCAAAGGGACTCTGCTTCCATCAGCACTTGTCTGGGTGACATcacgaccagcagcagccaatcagattcctcCACGGTATGTGGGTTTATTCACAGAAGTGCAAGGATTCACTGACCAGCAGAAAGAGGAGTACTTCAGAAAGAGATTCACAGATGAGAGTCTGTCCACCAGAATCATTTCACACATTAAGACGTCTCGTAgtctctacatcatgtgccacgTTCCGgtgttctgctggatcacagccacagtacttcaggatattctcactgagaacaatgaagagaacatcagcacaacactcactgaaatgtacattcacttcctgCTGATACAGACGGACATGAAGAACCAGAAATATGATGAACAAGAAGAAAGAGAATGTATAGAGTgcttacaattaaataaagagattattttaaagttagCTAAATTAGCATTTGAACAACTAAAGaaggaaaacattgtgttctatAAGGAAGATCTAAAAGCATGTGATATTGATGTGAGTAAAGACACTGAGCCCACAGGAATGATTGCTGAGATCTTCAGAAGGGAACACAGACTTCATGGAGCAAAGGTCTTCTGCTTTGTGCATCTGAGTGTTCAAGAGTTTCTCGCTGCATTGCATGTGTTCATCTGCTATCTGAACAAGAACATGCAGGagcttcagtttttctttgatgGGCCAGAAGAAAATGTGACATTAGAAAAGTTACTGCAGAAGGCCATTGATAAAGCCATGGAGAGTCAGATAGGACATCTGGACCTGTTCCTGCGTTTTCTGATGGGAATTGCACTGGAATCCAGTCAAAACCTGCTCAAAGGCCTGATCACACATGCTGAAGACACCACAAAGATCATCATAAACATAAGtgaatacatgaaaaaaaaacaaaacgagtACATTATTTCAGATGAAGCTCTAGTAAACTTATTGTACTGCTTACTTGAGCTCAAAGATAACTCATTAAATGAAGAAATCCAGAAATACCTCAGTTCAGATGAACATCCAGGAAGAGATCTCTCATCTTCAATGTGTACAGTGCTGACCAACATACTGTTGATGTCAGAGAAGGTGCTGGATGAGTTCAACCCAAAGAGGTTCACATCAGAACAATCAGACTACAAGAGACTCATTCCAGCtgtgagatgctgcagaaaAGCCCTatttgacggctgtggttttgatgaaacatgctgtgaaaCTGTGTCTTCTGCTCTACAATCATCAAATTCTCATCTGATAGAGCTGGACCTGAGCAGCAatcacctgcaggattcaggagtgaagctgatttatgatggactgaagagttcacactgtcgactgaacatactgagGCTTTGTGGCTGTAGTCTCACTTCTCAGTCCTGTGAAAGATTGTCATTATCCctacaatcatcaaactctgtcctgagagagctggacctgagtaacaatgacctgcaggactCAGGAGTAAAGCTTCTGtatgatggactgaagagtccaaactctaAGATGGAGATTTTAAGattttccacatgtaatctcactgcGCAGTCTTGTGGGAGTTTGTCATCAGTTTTAGAAtcatcaaactctgtcctgaaagagctggacctgagtaacaatgacttGCAGGACTCAGGAGTAAAGCTtctttctgatggactgaagagtccaaactgtaaGCTGGAGATACTGAGGTTttctggctgtatggtgacagagaaaggctgttattatgtgtcttcagctttgagtCCACTGAACAAACTCAAAGTTGATCATGGAGGAGAAtccaggattacagcaggactCAAGAAATatGCATGTTttctcacactggatccaaacacagcgcACACTGATCTCcgtctgtctgaggagaacagaaaggTGACGTATGTGCTTGAGTCTCAGtcatatcctgatcatccagagagatttaatgatgtttatcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggagatcGAGTGGAGTGGAGGTGTGtctatatcagtgtcatataagagcATCAGCAGGAAGGGAGGTGATGACTGTGTGTTTGGAaataatgatcagtcctggagtttggaCTGCTCTCCTGACGGTTACTCATACAGACACAATAACAGAGAGATTAATTTCCCTGTACagcccatcatcatcatcagaagaagaagatcaGGAGTGTCTGATAATATCAGAAGAACAGGAGTGTATGGTAATATCGctagagtaggagtgtatgtggatgagttcgcaggaactctgtccttcttcagcgtctctgactcaatgagactcatccacacagtccagaccacattcactcagacactctgtcCTGGGTTTACCGTTTATTATGGATCATctgtgaaactgtgttgatgaatcagaagagactgatgagATTCTACCCAGAATGCTTTGAGCTGTGTAATGAAACAGTAATGGTGAGATATTATGAGCCTCTTCATGACATTAATACCGCAGCACAAAAgtgatatataaatagatataaatgcCAAAATAAATGTGTCAGAGATAAAAGGTTACTGGTATCCAACTGCCAGTAATCAAATTAGATTTACTTGACAGTAATAGCTTTACTGTATATTACTATCAGTATCAGTACAGtagagtttattttcatttattgaaaaatgttttacctgtaaaaatataaaaataaacaattttaattgtGGGACAGAACTGCAAACCATCACAACCCCCCCAAAATCATAACAActcattaatttaaattagacAGAGGTCCTGAAACACTGCCACACTCTCTAGCATCATTGTCTGCAGTATCGCAAAGATGCCCATGGTGGTCTTCTCAGTGGCACTCTGTAAAAGATCTTCCGTGTCCTAAAGATGAATATGTATTTAACATGTGAACAAGAAATATGTACCTTACTAGtcaaatcatttttagaaaatggcAGTGCTTACAGTGACCCCAATCTACTATCTTGTCCTATTAAAAGGcataatgcaaattattttaaagaaaggtccatcatttgttattttacattatgtttAACTTAAGAACTACAAAAATGCTGTTATCCTTATGAAAACTGTTTATTCAAGAGTGCTATTAGtatacttattttaaacttaaaataggAAAGTATACTCttagtttactttttatgtacATCTCAGAAATATGCTTAAAATTACATAAGTATACTTAACTTATActtagtatataatatatttattatatacttttatatttatttatatttatactttatattataactTCCGTACACAATTTCCAAAACACAAGCAAGGAAGAAACATTCTTCCAACAGCATAAAACAGCATCAAAACTCTGACTCtgactgacaaaaaaatgttatggaATAAAATGTTGATCCATGAAGAGAATAATGACGGACAAACTTTGGGCTGTTGATCGACTTCATCTGCATTTTGTTTATCATTATGAATCCATTCCATTCTATTCcattttttagctttttgttcaaatattcGTATAACAACATATATACAAATGAATACCTAGATGTAACCCGTATTAACTGCCGttaatatggatttaaataaagGCGTAATCGACATCGCTGATGAAAAATAGCGATGGTCTCTTTAAGAATGAGTGGCAGCAGTGAGTCAAGCCCCGCCTATCTTTTCTTGGTAGAGCTCATCAGAGAGAAAATTCTCGATTCTCTTAGAGTGGGAAGAGGCAGCTACAAGAAGCGATCTCCTAATCCTTCTTTGTAAGTGACTTAATTAGGGAAAAATTATCAGATATTACAGAAATCGTGATTTCTGAAGCTGAAATTCTAATGTGAAAGATTTACAGAACTGCAGAGTTAAAAAGTGCCACAAAAGAACTccttgaatatatttatttatccctTGGtgagattgatttaaatgtcTTGATAAAACTTGATATCT

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236080.1 True 4975 mRNA 0.38 12 21071372 21081090

Neighbor

gene id symbol gene type direction distance location
LOC122342968 NA coding downstream 32973 21030443 ~ 21038399 (-)
LOC122342960 NA coding downstream 108849 20949743 ~ 20962523 (-)
LOC122342953 LOC107575420 coding downstream 155532 20907255 ~ 20915840 (-)
LOC122343141 NA coding downstream 179697 20888926 ~ 20891675 (-)
LOC122342999 NA coding downstream 199678 20865561 ~ 20871694 (-)
LOC122342959 LOC107575420 coding upstream 150670 21231760 ~ 21247753 (-)
LOC122342288 LOC107667978,LOC107563545 coding upstream 169309 21250399 ~ 21276097 (-)
LOC122342980 LOC107571898 coding upstream 201197 21282287 ~ 21288322 (-)
LOC122342290 LOC107561645,LOC107741456 coding upstream 228442 21309532 ~ 21313970 (-)
LOC122343094 NA coding upstream 237724 21318814 ~ 21322095 (-)
G30301 LOC107707774,LOC107566977,LOC107677745 non-coding downstream 3184 21065914 ~ 21068188 (-)
G30317 LOC107561645,LOC107575420,LOC107747810,LOC107575457,LOC107741456,LOC107667978 non-coding downstream 97307 20972276 ~ 20974065 (-)
G30293 NA non-coding downstream 334212 20736146 ~ 20737160 (-)
G30286 NA non-coding downstream 393508 20676260 ~ 20677864 (-)
G30273 NA non-coding downstream 420540 20650106 ~ 20650832 (-)
G30343 NA non-coding upstream 36725 21117815 ~ 21126071 (-)
G30394 NA non-coding upstream 297492 21378582 ~ 21765825 (-)
G30406 NA non-coding upstream 411174 21492264 ~ 21492907 (-)
G30408 NA non-coding upstream 418548 21499638 ~ 21499998 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding upstream 587720 21668810 ~ 21673424 (-)
LOC122343098 NA other downstream 17647 21048857 ~ 21053725 (-)
LOC122343123 NA other downstream 206966 20858423 ~ 20864406 (-)
G29906 NA other downstream 788972 20281106 ~ 20282400 (-)
G29902 NA other downstream 832818 20237137 ~ 20238554 (-)
LOC122343146 NA other downstream 1061660 20000988 ~ 20009712 (-)
LOC122343113 LOC107749046 other upstream 195132 21276222 ~ 21279043 (-)
LOC122343135 NA other upstream 246525 21327615 ~ 21336881 (-)
G30395 NA other upstream 302379 21383469 ~ 21386437 (-)
LOC122343153 NA other upstream 306763 21387853 ~ 21783591 (-)
G30396 NA other upstream 548527 21629617 ~ 21776806 (-)

Expression


Co-expression Network