LOC122342285 (LOC107725790,LOC107656690)


Basic Information

Item Value
gene id LOC122342285
gene name LOC107725790,LOC107656690
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21167249 ~ 21167961 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236082.1
AAACCCAAActccacactggagagagacCTTACACTTGTGAACTGTGTGGGAAGAGCtacaaaagaaaggaaaatctTACATTTCACACAGGAATTCACAGCGGAGAGAAAACGTTCatctgctctcagtgtggaaagagttttaaacAGAAGAAGTACCTCAATGATCACATGACAATtcacacgggagagaagccGTTTGTTTGTGATCTGTGTGAAAAGAGTTTCAGGTGTAAAGGACACCTTGATCTTCACATGAAGAGTCACTCGGGAGAGAACTGTTTTATATGTCagcagtgtgggaagagtttctcACACAAAGGACACTTCGAGGATCACATGAGAACTCACTccggagagaagcccttcacctgtcctcagtgtggaaagagcttcacGGCTAAAGGAAACTTTAAGACtcacatgagagttcacactggagagaagccttacaagTGTCCTCAGTGTGACACCAGCTTCACGCATCACACAAACCTCAAGCGTCATATGCAGACTCATTCTGGAGAGAGTTTCCCAACTTCATGCCACACGGAGGAAGATAGTGTTACAACAATCACCTGAACATTTCCTCTGAAGAAAGATGATTGAGTTGAGATCAGATCAATGAACACATTCGTATCAAACCTCATGTGTTGAGTCCTATTTAGACAGGACTAGTTTTACATGGAGAGGTGCAATAAAGTATTACTAGA

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF52.1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236082.1 True 713 mRNA 0.43 1 21167249 21167961

Neighbor

gene id symbol gene type direction distance location
LOC122343080 NA coding upstream 6224 21156073 ~ 21161025 (+)
LOC122342972 NA coding upstream 54921 21093453 ~ 21112328 (+)
LOC122342958 LOC107566977,LOC107677745 coding upstream 100399 21055492 ~ 21066850 (+)
LOC122343014 NA coding upstream 123231 21039780 ~ 21044018 (+)
LOC122342283 NA coding upstream 146377 21018152 ~ 21020872 (+)
LOC122342287 LOC107722090,LOC107694763,LOC107585758,LOC107668179,LOC107574018,LOC107573797,LOC107697810,LOC107566573 coding downstream 9594 21177555 ~ 21182761 (+)
LOC122342986 LOC107563545,LOC107667978,LOC107741456 coding downstream 14276 21182237 ~ 21186135 (+)
LOC122342966 LOC107563536 coding downstream 54609 21222570 ~ 21230104 (+)
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding downstream 124351 21292312 ~ 21305636 (+)
LOC122343117 NA coding downstream 209577 21377538 ~ 21379639 (+)
LOC122343163 NA non-coding upstream 7 21163756 ~ 21167242 (+)
LOC122343205 NA non-coding upstream 33647 21131154 ~ 21133602 (+)
LOC122343166 NA non-coding upstream 40829 21126085 ~ 21126420 (+)
G30056 NA non-coding upstream 48727 21117661 ~ 21118522 (+)
LOC122343171 NA non-coding upstream 195000 20971510 ~ 20972249 (+)
G30077 NA non-coding downstream 80226 21248187 ~ 21248425 (+)
G30090 LOC107749046 non-coding downstream 108149 21276110 ~ 21301007 (+)
G30085 NA non-coding downstream 143594 21311555 ~ 21337024 (+)
G30104 NA non-coding downstream 165284 21333245 ~ 21721910 (+)
G30110 LOC107718524,LOC107563870 non-coding downstream 201461 21369422 ~ 21374537 (+)
G30058 NA other upstream 24418 21118562 ~ 21142831 (+)
G29961 NA other upstream 460403 20696672 ~ 20706846 (+)
G29921 NA other upstream 798433 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 820525 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 1123796 20037933 ~ 20043453 (+)
LOC122342286 LOC107578117 other downstream 1232 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 200682 21368643 ~ 21761181 (+)
G30119 NA other downstream 220232 21388193 ~ 21630120 (+)
G30115 NA other downstream 471579 21639540 ~ 21641756 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 1063509 22231470 ~ 22231924 (+)

Expression


Co-expression Network