LOC122342295 (LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978)


Basic Information

Item Value
gene id LOC122342295
gene name LOC107573707,LOC107575631,LOC107689603,LOC107741456,LOC107667978
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21447240 ~ 21449510 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236091.1
caTACTAAACCATTTGTCCTAAAACAGACACTTGTCCTAAAACTGCTCAGCAAATTTTAAATGCTCATCAGACACTCACCATGTGAAAGAACAAGAGATCTCCTGGACATCTGTCCCAAAACTCAGTCTCAAGAGAAAGTGGGCCATACAGCAAGACAACAAACAACGGTTAAAGAAGGAggtggaaggagctgaaacaagCAGTTCAATTGAGGAAAACCCACCAACATCACAGAGTTGAAGTGGTTATGTAATGAGGAACAGGCTGAAAGTCCTACAAGATGAACAAGATTCGTGAGTTGGTGAAGGACGATGGCGTCTGTTAAAAAGCTGCTCTTGGACCAACTGATGGAGCTGGCAGAAGATGAACTGAAGAATTTTCATTGGCATTTAGTGAATTTTTATCAAAAGTGCATATCAAAGTCTGAATTGGAAAATGCAGATAGATGTGACACAGTAGATAAGATGGTGATGTGTTTTGGACCAGAAGAAGCTGTAAAGGTCATGGTAGACGTCCTGAGAAAGATAAACCAAAATGATCTGGCTGAACAGTTGCAGAATGAACACAAGCaagCTCAGACTGAGGACAATATGAAGACATCTGTCCCTGTTAGAGagctacaaaatgtcttgaaaactcacaaaaacaacatgaagatgaagacaaaatacatttttgagggCAACAAAGAAACTGACACAGATCTGAAAGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTAAATCAGGAACATGAGATTCTGAAGATTGATGATGCTTTCAAgagcaaaaaaacactgaacaaaccaatcaaatgcaatgatatatttactgaactGAGGAAAAACAATGAGTTAAAGATTGTGTTGACCAAAGGAGTCGCTGGCATTGGGAAAACTGTGTTTGTGcacaagttcatcctggactgggtAGAAGGAGAATCTAATCAGGATATAGACTGTGTGTTCCTgcttccattcagagagatCAATGTGATTAAAGAAAGAGAGGTCAGTCTCCATGAGTTTCTGCTGAAATTTAATCCTGAATTGATGTTCCTGGAGAAATCAAAGttatatacagaatataaacttgtgtttatttttgatggacttgatgagAGTCGACTGCCTTTGAATTTTGAAAGTGATACATTGAACACTGTTGAGGAAAGATCATCTGTAGATGTGCTGTTTACAAGTCTGGTCAAAGGTAAACTGCTTCCATCAGCTCTTGTCTGGGTCACATCACGACcggcagcagccaatcagatccctccTCAGTATGTAGGATTGTTCACAGAAGTGCAAGGATTCACTGACCTACAGAAGGAGTGA

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236091.1 True 1353 mRNA 0.40 4 21447240 21449510

Neighbor

gene id symbol gene type direction distance location
LOC122342293 NA coding upstream 47092 21398817 ~ 21400148 (+)
LOC122343117 NA coding upstream 67601 21377538 ~ 21379639 (+)
LOC122342289 LOC107685875,LOC107749047,LOC107728228 coding upstream 141604 21292312 ~ 21305636 (+)
LOC122342966 LOC107563536 coding upstream 217136 21222570 ~ 21230104 (+)
LOC122342986 LOC107563545,LOC107667978,LOC107741456 coding upstream 261105 21182237 ~ 21186135 (+)
LOC122343031 LOC107563545,LOC107564010 coding downstream 7 21449517 ~ 21452862 (+)
LOC122343024 NA coding downstream 194809 21644319 ~ 21650178 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding downstream 224210 21673720 ~ 21690532 (+)
LOC122343020 LOC107667978,LOC107741456,LOC107575631,LOC107563545 coding downstream 224292 21673802 ~ 21809079 (+)
LOC122343144 NA coding downstream 291813 21741323 ~ 21742305 (+)
G30110 LOC107718524,LOC107563870 non-coding upstream 72703 21369422 ~ 21374537 (+)
G30085 NA non-coding upstream 110216 21311555 ~ 21337024 (+)
G30090 LOC107749046 non-coding upstream 146233 21276110 ~ 21301007 (+)
G30077 NA non-coding upstream 198815 21248187 ~ 21248425 (+)
LOC122343163 NA non-coding upstream 279998 21163756 ~ 21167242 (+)
G30132 NA non-coding downstream 30047 21479557 ~ 21522253 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding downstream 36202 21485712 ~ 21527011 (+)
G30134 NA non-coding downstream 47313 21496823 ~ 21498381 (+)
G30136 NA non-coding downstream 49354 21498864 ~ 21499514 (+)
G30130 NA non-coding downstream 299500 21749010 ~ 21811284 (+)
LOC122342286 LOC107578117 other upstream 272900 21169193 ~ 21174340 (+)
G30058 NA other upstream 304409 21118562 ~ 21142831 (+)
G29961 NA other upstream 740394 20696672 ~ 20706846 (+)
G29921 NA other upstream 1078424 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 1100516 20344346 ~ 20346724 (+)
G30115 NA other downstream 190030 21639540 ~ 21641756 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 781960 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 847387 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 1212316 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 1328473 22777983 ~ 22780139 (+)

Expression


Co-expression Network