LOC122342305 (LOC107697548,LOC107574116,LOC107758214)


Basic Information

Item Value
gene id LOC122342305
gene name LOC107697548,LOC107574116,LOC107758214
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21841181 ~ 21842230 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236100.1
GAAGCCTTGCAATGCACATGAAATTTCACATTGAAAAGAAACCTTCAATAtgccctcagtgtggaaagagttttacacGGAAACAATATCTTAATGTCCATATGACagttcacaccggagaaaaACCTTACACTTGCAAactgtgtgggaagagtttcagaCAGAAAAGTACACTTGACGCCCACATAAAACGCCACACTGGAGAGAGACCTTGCACCTGCAAactgtgtgggaagagtttctcGAAAGAGTATTTTAAGATTCACATGAAAATTCACactgaaaagaaaccattaaTATGctttcagtgtggaaagagttttacagaaaaaaaactatttaaagatcACATGAGAATTCAGGGAGAGAGACCTTTTACCTGCAAactgtgtgggaagagtttctcACGTAAAGACAGCCTTAAGGTTCACTCGAGGATtcacacgggagagaagccTTTTACATGTGTTCAGTGTGGAAAGGGTTTTACACAGAAAAGCATACTTACTTGCCACATTAGactccacactggagagaagcctttcaccTGCCCTcaatgtggaaagagttttaggATTAAAAGAAACCTACAGGATCACATAAGAAGCCACACCGGGGAGAATCCGTTCACATGCGATCAGTGTGGAAGGACTTTCAGATATAAAGAAAACCTTAATTATCACATCAGTACTCACTCAAGAGAAATCAGGTTTAAATGTCATCAATGTGAAAGAAGTTTCACAGACACGAATCACCTCCAGGAACATGTTAAAATTCACATCGGAGAAAAGCCTTTCATGTGCCATCACTGTGGGAAGAGTTGCTCAAAAAGAGATCACCTCAGAGATCACGTGAGAagtcacactggagagaagcctttcacctgtgatcagtgtggaaagagtttcagtgCTAAACGGACCCTAAAGACTCACGTAtggattcacaccggagagagaccTTACAGGTGTCCTCGGTGTGAGAAGACTTTCAGAAGCCAAAGCAGCATGAAACGTCATTCGCAAACTCATTCTGGAAAGAAAGAGTGA

Function

NR:

description
PREDICTED: gastrula zinc finger protein XlCGF57.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236100.1 True 1049 mRNA 0.42 2 21841181 21842230

Neighbor

gene id symbol gene type direction distance location
LOC122343035 NA coding upstream 26744 21809156 ~ 21814437 (+)
LOC122343020 LOC107667978,LOC107741456,LOC107575631,LOC107563545 coding upstream 32102 21673802 ~ 21809079 (+)
LOC122343144 NA coding upstream 98876 21741323 ~ 21742305 (+)
LOC122342967 LOC107569100,LOC107575457,LOC107679413,LOC107566978 coding upstream 150649 21673720 ~ 21690532 (+)
LOC122343024 NA coding upstream 191003 21644319 ~ 21650178 (+)
LOC122343067 NA coding downstream 261088 22103318 ~ 22104932 (+)
LOC122343041 zbtb24,LOC107736039 coding downstream 263006 22105236 ~ 22107457 (+)
LOC122342312 NA coding downstream 561823 22404053 ~ 22405822 (+)
LOC122343018 LOC107705900 coding downstream 591824 22434054 ~ 22446278 (+)
LOC122343138 si:ch211-133h13.1,LOC107574515,LOC107574820 coding downstream 706387 22548617 ~ 22561763 (+)
G30130 NA non-coding upstream 29897 21749010 ~ 21811284 (+)
G30104 NA non-coding upstream 119271 21333245 ~ 21721910 (+)
G30133 LOC107749047,LOC107571854,LOC107728228,LOC107669894 non-coding upstream 314170 21485712 ~ 21527011 (+)
G30132 NA non-coding upstream 318928 21479557 ~ 21522253 (+)
G30136 NA non-coding upstream 341667 21498864 ~ 21499514 (+)
G30205 NA non-coding downstream 299114 22141344 ~ 22255433 (+)
G30206 NA non-coding downstream 320408 22162638 ~ 22240294 (+)
G30212 NA non-coding downstream 332725 22174955 ~ 22252519 (+)
G30226 NA non-coding downstream 408205 22250435 ~ 22251792 (+)
G30233 NA non-coding downstream 431581 22273811 ~ 22280970 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other upstream 80000 21368643 ~ 21761181 (+)
G30115 NA other upstream 199425 21639540 ~ 21641756 (+)
G30119 NA other upstream 211061 21388193 ~ 21630120 (+)
LOC122342286 LOC107578117 other upstream 666841 21169193 ~ 21174340 (+)
G30058 NA other upstream 698350 21118562 ~ 21142831 (+)
G30218 LOC106676322,LOC106676931,LOC106676323,LOC107752219,LOC106675762,LOC106674878,LOC106676183 other downstream 389240 22231470 ~ 22231924 (+)
LOC122342310 LOC107685875,LOC107671223,LOC107749047,LOC107728228,LOC107576424 other downstream 454667 22296897 ~ 22305148 (+)
LOC122343019 LOC107705900 other downstream 819596 22661826 ~ 22682712 (+)
LOC122342317 NA other downstream 935753 22777983 ~ 22780139 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other downstream 1286876 23129106 ~ 23130189 (+)

Expression


Co-expression Network