LOC122342325 (LOC107741456)


Basic Information

Item Value
gene id LOC122342325
gene name LOC107741456
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23240075 ~ 23250614 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236116.1
ATGGCGTTTGTCAAGGAGCTGCTCGTGGGGTCACTGAAGGGGCTGGTAGAAGCTGAACTAAAGGAGTTTCACTGGCGCCTAATGAATACATATCATAAGCATATAACAAAGTCTGAATTGGAGAAGGCAGATATATTTGACACAGTAGATAAGATGGTGGTGTGTTTTGGACCAGAAGAAGCTGTGGAGGTCATGGTAGATATCCTGAGAAAGATGAACCAAAATGATCTGGCTGAACAGTTGGTGAAAGAACACACGCAAGctcAGACGGAGGGCAATATGAATATATCTGCTGCTGTTGGAGcagcagccaatctgATTCCTCCTCAGTATGTAGGTTTGTTCACAGAGGTTCGAGGATTTACTGACCAACAGAAGGAGCAGTACTTCACAAAGAGGATGAAAGATCAAAGTCTGTcctccagaatcatctcacacattaagACGTCGCGTAgtctctacatcatgtgccacattccTGTATTCTGCTGGATCACAGCCACAGTACTTCAGGATATTCTCACAGAGAACAATGAAGAGAACATAAGCACAACactcactgaaatgtacattgaCTTTTTGCTAATACTGTTGGATATGAAGAACCAGAAATTCGATGAACAAGATGAAAGAGAATGTTCAGAgcacttaaaattaaatagagaAATCATTTTGAAGTTAGCCAAGCTAGCATTCGAACAGCTGAAGaaggaaaacattgtgttctatAAGGAAGATTTAAAAGCATGTGGTATTAATGCGAGTAAAGAAACTGAGTTCACAGGAATGATCGCtgagatttttaaaagggaACGCAGACTTCATGGAGCAAAGGTTTTCACCTTTGTGCATCTGAGTGTTCAAGAGTTCTTCGCTGCAGTCCACGTGTTCCTCTGTTATCTGAACAAGAACATACAAGagcttcagtttttctttgatgGGCCAGAAGAAAATGTCACATTAGAGAAGTTACTACAGAAGGCCATTGAAAAAGCCATGAAGAGTCAGAGAGGACATCTGGATCTGTTCCTGCGGTTTCTGTTGGGCATTTCACTGAAATCCAGTCAAATCCTGCTTAAGGGCCTgatcacacacactgaagacaCTACAGAGAGCATCATGAGAATAAGTgaatacattaaacaaaaacacaacaaAGAAGGTGCTGGACGAGTTCAACCCAAGAGGTTCACATCAAAACAAGCAGACTACAAGAGACTCATTCCAGCtgtgagatgctgcagaaaAGCCCTATTTGACGGCTGTGGTCTTGatgaaacatgctgtgaaaCTGTTTCTTCAGCTCTACAATCACCTAAATCTCATCTAACAGAGCTGGACCTGAGCAGCAatcacctgcaggattcaggagtgaagctgctttctgatggactgaagagtccacaCTGTCATCTGAACATACTGAGGCTGTGTGGCTGTAATGTCACTTTTCATTCCTGTGAAAGTTTGTCCTTAGCCCTACAATCCTTAAACTGTGTCCTGAgtgagctggacctgagtaacaatgacctgcaggattcaggagtgatgctgctttctgaaggactgaagagtccaaactcaAAGCTGGAGATTTTAAGATTTTGCAtatgtaatctcactgcacagtCTTGTGGGAGTTTATcgtcagttttacaatcctcaaactctgttctgagagaactggacctgagtaacaatgacctacaggattcaggagtaaagcttctttctgaaggactgaagagtccaaactccAAGCTGGAGACACTGAgGTTGTCTGGCTGTATGCTGACAGAGaaaggctgtggttatgtgtctttagctctgacttcaaacccctcacacctgagagagctggatctaagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaactggaggatccaaactgctcTCTGAACAAATACAAtGTGGACCATGGAGGAGAAtccaggattacagcaggactGAAGAAATatgagtgttttttcacactggatccaaacacagcacacactaaaCTCagtctgtctgaggagaacagagagGTGACAGgtgtgtctcagtctcagtcgtatcctgatcatccagacagatttgattgTGTGCCTCAGGTGTTGTgtcgagagagtgtgtgtggacgctgttactgggagaccGAGTGGAGCAGAGATACTGTGTCtgtatcagtgtcatataagaacatcagcaggaagggaGAGGgtgcagagtgtgtgtttggacgtaatgatcagtcctggagtttgcgCTGCACTCCTCACAGAtactcattcagacacaataaCATAATGACTGATCtctctgtgaagcccatcaGCATCAGCAGAAGAACAGGAGTGTATGATGATATCTATAAAGTAGGggtgtatgtggatgagagcgcaggaactctgtccttctacaacatctctgacacaatgacacatttacacacagtccagaccacattcactcagacccTCTGTCCTGggttttatctttattattctggctcatcagtgaaactgtgtcgatgaatcagaagagactgagCAGAGTTGTAGGGAATCGGTGTGAATTAGACAATCAGGGTCGAGTTCCACAAAGAGGCTTGCAACATTAACACAAACATTTCAATTCAGGAAGAAGATTTTCACTTTTAGGCCAAGTAACCAAGATTCATGGTCAAAAACACAGCACATCATCAACATAACAtgggtaaaataataaaaaagaatctgTTGGATGCATCTCCATCCCCCCACTCAGAACACAGAACTTTTAACCTTTGGTTTGCACAGAactaattttgttttcatccacATGCATGCTCAAAATCATCTTAAAAAGACTTTAATCACTTATATGCATAACTGCATATTATATGTAACCCACATGTTTAACTATCACATGCTAATCGCtaattgttaatgtatttggaATAACTACACGCATAACAAACTATTGTTTGGTATGCGTGATCTTCAATTTCCCacctttgaaatgttttttccaaCCAATCCTTGGCCAAATGTATCATATTCGTGTTCTAGAAATCATGTCCAATATTGTACTCTGCAAGAGCACATATTTATGACAGACTCTTATTGCTACGGAAAAAGGCTAGGATATATGTTGTTTCTCCTCTTGCTCTTTGATTGAAAATCACAACCAAAAATTGACACTATGGTATCttatcagaattttattttcgGGACTGTTTTTTCTGATTAGTGTTGCAGTTAAAAGTCACCAAGTGCAACCATTTGACATCATTGACACAGAATGTACTGTGcactgtactgtaaaataatggcGACCCATAGTCCAGAAATAGCTGTCaatcttttaaataacatacatcTTTCATGGGTTTCTATTACACGTTTCAGTAAGAGacatcatttatgttttattaggCTATCAATGTCTTAACACGCAGGGATCCCTTCAATCTTAACCTCATTGAGGAACTCAATGTGAGGGTTAATCATGTGATTGATGGTTGTTCAGGTCTATGCAATTTCCCACATTGCTGTAAACTTgggatttcacattttcattctcttgaacacactttctctctgttCCTTCAACTCATATGaatgagtgtgtttatgtgttagTTTATGTGTCTTATCCAATAAAgccatatttatat

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236116.1 True 3680 mRNA 0.41 10 23240075 23250614

Neighbor

gene id symbol gene type direction distance location
LOC122342324 NA coding downstream 2995 23230042 ~ 23237080 (-)
LOC122342323 NA coding downstream 20902 23201470 ~ 23219173 (-)
LOC122342322 NA coding downstream 42460 23196547 ~ 23197615 (-)
LOC122343148 NA coding downstream 383943 22840016 ~ 22856132 (-)
LOC122343143 NA coding downstream 457821 22781662 ~ 22782254 (-)
LOC122343073 NA coding upstream 5751 23256365 ~ 23259319 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding upstream 475138 23725752 ~ 23727918 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding upstream 566235 23816849 ~ 23929534 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 957041 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 1014735 24265349 ~ 24266607 (-)
G30967 LOC107561645 non-coding downstream 186455 23051748 ~ 23053620 (-)
G30938 NA non-coding downstream 378455 22858259 ~ 22861620 (-)
G30926 NA non-coding downstream 450773 22787546 ~ 22789302 (-)
G30920 NA non-coding downstream 467221 22770855 ~ 22772854 (-)
G30547 NA non-coding downstream 670017 22569635 ~ 22570058 (-)
G30992 NA non-coding upstream 13118 23263732 ~ 23264216 (-)
G30993 NA non-coding upstream 15144 23265758 ~ 23266130 (-)
G30994 NA non-coding upstream 16011 23266625 ~ 23266858 (-)
G31012 NA non-coding upstream 141065 23391679 ~ 23397273 (-)
LOC122343160 NA non-coding upstream 203663 23454277 ~ 23455816 (-)
G30450 NA other downstream 994915 22128454 ~ 22245160 (-)
G30457 NA other downstream 1023605 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 1456484 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 166277 23416891 ~ 23437015 (-)
G31017 NA other upstream 227911 23478525 ~ 23546369 (-)
G31050 NA other upstream 494872 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 859610 24110224 ~ 24110673 (-)
G31134 NA other upstream 1053482 24304096 ~ 24497596 (-)

Expression


Co-expression Network