LOC122342331


Basic Information

Item Value
gene id LOC122342331
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24222077 ~ 24225829 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236121.1
ATGCCTTTTAATATTGAAGAGTATAAAGTCGTGAAGACTGAAGAAGCTTTCTTAGTCGACCATGACTATACTAAGACACAATCAAAGATGCAGTTTAAAATAGAGGATGAAGATGTGAAGACTGAGGAAGTCAAACAAGAAGATACTGAGGAACAACAAACAGAGATTGTGTATATTATAGAAGAGACTGAAGGATCTTTCAGAGTCAAGCGTGTAACAGATTTCGGTCAGAAGGAAAACTTTAATAACCACATGAGAAATCACTCTGAAGAGAAGCCGTTCAGATGCCCTCACTGCGAAAAGGGGTTTATACTGGAGAAAAAACTTACAGCCCACTTGAGAGTTCACACCAGAAACAATCCTCACACCTGCAAAAAGTGTGGGAAGAGTTGCTCATCCAAAGCTCATCTGATCACTCACATGAGAGTCCACGCCGAAGACAAGCCTCACTCCTGCAAACTATGTGGGAAGGATTTCACAGGAAACGGTCAACTAATGGCTCACATTAGAggtcacactggagagaagtcTCACACCTGCGATCTGTGTGGGAAGAGCTTCATGAATAAAGGAAGCCTCAAGGCTCACATTAgggttcacaccggagagaagccttacaagTGTcctcaggagGAGCTTCTCTCACACTGTGCCAAGAGGTTTAGAAGAAGCGGCATTGATCTGTTTGCTCTGGAGAAAGAAGATTCGGCTGATCTgtctaataaaaacatcattcACATCATAAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236121.1 True 750 mRNA 0.43 3 24222077 24225829

Neighbor

gene id symbol gene type direction distance location
LOC122343033 NA coding upstream 65578 24152756 ~ 24156499 (+)
LOC122343029 LOC107717679,LOC107693607,LOC107575410 coding upstream 72618 24144732 ~ 24149459 (+)
LOC122342945 LOC107563545 coding upstream 77506 23633798 ~ 24144571 (+)
kdm5a kdm5a,LOC107710764 coding upstream 109165 24093880 ~ 24112912 (+)
LOC122343046 NA coding upstream 130725 24084959 ~ 24091352 (+)
LOC122342332 NA coding downstream 6537 24232366 ~ 24244625 (+)
LOC122343090 NA coding downstream 18946 24244775 ~ 24252528 (+)
LOC122342333 NA coding downstream 26838 24252667 ~ 24259516 (+)
LOC122343118 LOC107677819,LOC107725800 coding downstream 83598 24309427 ~ 24312747 (+)
LOC122342339 NA coding downstream 93811 24319640 ~ 24322138 (+)
G30743 LOC107685875,LOC107728228,LOC107569032,LOC107749047,LOC107574018,LOC107576424,LOC107705465,LOC107564371,LOC107671223,LOC107570416 non-coding upstream 10597 23787750 ~ 24211480 (+)
G30723 NA non-coding upstream 19405 23769174 ~ 24202672 (+)
G30748 NA non-coding upstream 191336 23907305 ~ 24030741 (+)
G30754 NA non-coding upstream 212186 24003642 ~ 24009891 (+)
G30751 LOC107671223,LOC107569100,LOC107575457,LOC107747635,LOC107679413,LOC107566978,LOC107670352 non-coding upstream 220513 23978432 ~ 24001564 (+)
G30819 NA non-coding downstream 84510 24310339 ~ 24314288 (+)
LOC122343172 NA non-coding downstream 192014 24417843 ~ 24419568 (+)
G30812 NA non-coding downstream 230193 24456022 ~ 24486887 (+)
G30877 NA non-coding downstream 488868 24714697 ~ 24714998 (+)
G31223 NA non-coding downstream 763038 24988867 ~ 24989274 (+)
LOC122342990 NA other upstream 80631 24133050 ~ 24141446 (+)
LOC122342976 usp15,LOC107685889 other upstream 90590 24117289 ~ 24131487 (+)
LOC122342321 LOC107741609,LOC107575420,LOC107710255 other upstream 1054070 23163695 ~ 23168007 (+)
G30632 NA other upstream 1062321 23157559 ~ 23159756 (+)
G30636 LOC107575420,LOC107667978,LOC107563545,LOC107741456 other upstream 1091888 23129106 ~ 23130189 (+)
LOC122343028 pacsin2,LOC107725788,LOC107569113 other downstream 228441 24454270 ~ 24466400 (+)
LOC122343023 LOC107568558,LOC107685877,LOC107725785,LOC107728057 other downstream 239625 24465454 ~ 24471450 (+)
LOC122343159 NA other downstream 410523 24636352 ~ 24638654 (+)
LOC122343125 NA other downstream 413260 24639089 ~ 24646601 (+)
LOC122343086 NA other downstream 447062 24672891 ~ 24674412 (+)

Expression


Co-expression Network