LOC122342338


Basic Information

Item Value
gene id LOC122342338
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24312842 ~ 24319112 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236125.1
acgcatacacatacTAAAACATGTTTAGTACCCCGACTGTGCTTTTATGTCTATGACAATTGactaaatgttcaaaataaaagtttcggACAAAATGAGTAACTACACAGAAACCTAGCACCGAGTATATGAGtatagctgtttttaattttatttatttcgtttttttaatacttGCTTGGGAAACACAACcgtgagagagaaaaacacgaAAAACgaatcaatcaatcgatcaaATAATAAACGCGACACTTTTTTCTGCCGTTATGATTCGTAAATAGTCGTGATGACGTCGCTGGCGCTCGCGCCGCTGTCGGCCAATCAGAGGCGCCGGCCCCGCCCCTCCGCTTCAGTCCGCGCGCGGTAAACCGGGCAGAATGAGCGCGTCCGCGACCGACGCGATGTTCCTGAGCGACGAGCAGGTCGTGAACCGCTGGGGCTTCGACTACTACGTGTTCAAGGCCCTCGGCGCCTTCAGGGACGGAGACTACGCGGCCTTCGAGCACTTCACGCGGGTCGTCGAGAGTCTGGTGCTCAGGCCCGTGGACGGACGCGGCGACATGAGTCAGCTGCGCTTCATGCAGTTCCTGTCCCGGATCAACAACGGAGACAGGCTCGATCTGATGTTCGAGGAGCCCCAGACCCCTCTGGAGTCGGCCCTCAGCGTCCTGGAGACCATCTGCAGGGACATGAGCGTCCCCCAGAGACAGCAGGAGCAGGTGCGGCACGCCATCGTCGAGacgCTGGTCGTGGTGTGTATCCGCAGCGGAGAGTTTGAGAAAGCTGAGGAGCTGCTGCTGAGACTCTTCAGTGACTCCAACGATTCAGCAGGAAGAaggaAGCTGCTGATGAATCTGATTCGTCGTCGTCGTTCTTCTCACTCGGTTCTTCAGCTCAGCTCGTTCAGTGACTTCAAGCAGGACATGCTGGACTTCCTGGAGCAGCTGTACCGTGTCCCGGGCCCTTCCTGCTGCAGGTGCCGCGCCCTACGCTCGCCCTCAGACCATCCTCAGAGTGTCTGCtcttcactgtgtgtgtgtgtgtgtgtgtgtgtgtgcagatgcggtgTGTGTGCGGCTCGTCTCAGTCTCGCGGGCGCTGCAGCGGGTGTACTGGCGTGCTCCGAGCGCTACGCTGTGAGCGTCTCCTTCACGCAGCTGCAGCGGGAGCTGGAGGACGAGAGCCAGGAGCCCGGAGGGCCCACGCCGGACAGACGCAGACAGAAGAGGATGGTCCTGTCCAGTGAAGAGGAGTCTGAGGAGTCCAgcagacacagacagaagaagaagaagcgaTCACAGCTCGTCTCCAGCTTCACAGACACACCACCGACACAGCTCTCCGTCCGGAGGAACTCACAGCaggaaggccCGGTGGGAGGAAGTGTCGGGATGCAGGAGAACTGGAGCGATGAGGAGTCACTGTTCGGCTCCTCTTCAGgccgCTCCAGCAGGAAGTGCAGCAGgaagatgtgGACGCTGCAGGAGTCGGAGTGGCTGAAGGAGGCGTGCAGCGTTGCGGGAGTGGGACACTGGGAGAAGATCCGCTCGTCCTTCCCCTTCGCGGGCCTTACGGCGGTCAACCTGAAGGACCGCTGGAGGACCATGCTGAAGCTCAGGCtggtctgacacacacacacacacacacacacacgttttatcatgtttttaggCCTTGTGTTCCTCATTAAACACtggttcattcattcattccctGAAAGTGTGTTCTTGATGTTCGAGGAGCTCCTG

Function

GO:

id name namespace
GO:0000723 telomere maintenance biological_process
GO:0000783 nuclear telomere cap complex cellular_component
GO:0042162 telomeric DNA binding molecular_function
GO:0003682 chromatin binding molecular_function
GO:0042803 protein homodimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236125.1 True 1748 mRNA 0.56 14 24312842 24319112

Neighbor

gene id symbol gene type direction distance location
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 46235 24265349 ~ 24266607 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding downstream 92834 24207655 ~ 24220008 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 383308 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 584924 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 1053523 23256365 ~ 23259319 (-)
ckap4 NA coding upstream 157884 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 166250 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 223026 24542138 ~ 24544170 (-)
LOC122342998 NA coding upstream 239020 24558132 ~ 24564000 (-)
LOC122342983 NA coding upstream 263855 24582967 ~ 24593953 (-)
G31127 NA non-coding downstream 550 24305255 ~ 24312292 (-)
LOC122343167 NA non-coding downstream 97270 24212067 ~ 24215572 (-)
G31088 NA non-coding downstream 184934 24126947 ~ 24127908 (-)
G31090 NA non-coding downstream 187181 24122812 ~ 24125661 (-)
G31082 LOC107710764 non-coding downstream 211975 24100450 ~ 24100867 (-)
G31142 NA non-coding upstream 12765 24331877 ~ 24332563 (-)
G31152 NA non-coding upstream 105815 24424927 ~ 24433401 (-)
LOC122343161 LOC107743936,LOC101883431 non-coding upstream 126417 24445529 ~ 24448290 (-)
G31124 NA non-coding upstream 134349 24453461 ~ 24464894 (-)
G31121 NA non-coding upstream 138302 24457414 ~ 24458259 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 202169 24110224 ~ 24110673 (-)
G31050 NA other downstream 541074 23745486 ~ 23771768 (-)
G31017 NA other downstream 766473 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 875827 23416891 ~ 23437015 (-)
G30457 NA other downstream 2096372 22216035 ~ 22216470 (-)
LOC122342340 NA other upstream 4858 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 434944 24754056 ~ 24760786 (-)
G31314 NA other upstream 1239928 25559040 ~ 25561198 (-)
G31394 NA other upstream 1854587 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 2005367 26324479 ~ 26325236 (-)

Expression


Co-expression Network