LOC122342367


Basic Information

Item Value
gene id LOC122342367
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26865773 ~ 26869148 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236146.1
ATGGCTCTACAAGATCtgactgatcctccagaagatcgTCTGTCTGGTTTATCGGATCCTGGTTTTGTACCAACATGTCTGcaggattcagctgatcttcttcCAGGCCCGTCAGCTCTTGAGCCAGTACCCCCAGAATTTCCAGCTGCTTGCAAGCATACACGAATCAAGGATCAAACCCGAGCAGCCTGTTTCGGCCGTCCAACTCCTGtaccatttgatgagatttatgaagTGGGAGATAAGCTTGGACAAGGAagctttggcactgtgtacGAGGGGACTTCAAAAATTCAACGCAAGAAGgttgccatcaaaatcATCCTCAAGTGTAAAAGAGACCGTTATATTGAACTACCTGGCTGTTCAAAGCcactgtttgcagaagtggctgcAAATCTGCTGCTCAAACAGGCTCCATTAAGCCCCTACATTGTGTACATGCTGGAATggtttgaagaggaggatcggttcatcctcatcctggaaCATCCGGAACCCTGCATGGACTTGCTCAGATTTGTGGTTCACAACATGCATTGGCCGAACGAATTACAGACACGTAGCCTGATGTATCAAGCGGTGCTCGGGGCCAAGCACTGTCTTGACCGAGGTGTCTTTCACCGGGATATTAAGTTGAATAACTTTCTGATCAACACGACGACTAACCGAGTCcaactaatagactttggctgcagTGACCTCGTCAAAAGTACAGGCTACTTGGGTGGTTTTATAGGACGATTCTGCCCACCTGAATACTACAAGGGCTTAGGATACAAGGCAGGGCCAACAACCGTCTGGTCTCTGGGTGTAATGATGTACGCAATGATGTGCAAATGTCTGCCCTTTAGCAGTCCTGAAGACATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236146.1 True 873 mRNA 0.48 5 26865773 26869148

Neighbor

gene id symbol gene type direction distance location
trnas-uga_106 NA coding downstream 138379 26727313 ~ 26727394 (-)
trnak-uuu_100 NA coding downstream 139876 26725825 ~ 26725897 (-)
trnak-uuu_99 NA coding downstream 141927 26723774 ~ 26723846 (-)
trnas-aga_108 NA coding downstream 142730 26722965 ~ 26723043 (-)
trnak-uuu_98 NA coding downstream 144204 26721497 ~ 26721569 (-)
flot1a flot1a,LOC107665160,LOC107549850,LOC107752515,LOC107666343,LOC103027319,LOC108433738 coding upstream 539940 27409088 ~ 27415650 (-)
pdk2b pdk2b,LOC107665156,LOC107752527,LOC107549851,LOC107753849,LOC107562510,LOC107666345 coding upstream 1077848 27946996 ~ 27951997 (-)
LOC122343310 LOC107752528,LOC107549854 coding upstream 1097161 27966309 ~ 27969769 (-)
wipf2b wipf2b,LOC107752530,LOC107549849,LOC107562512,LOC107665117 coding upstream 1100762 27969910 ~ 27977175 (-)
jupb jupb,LOC107562513,LOC107752531,LOC107549862,LOC107665165,LOC105013272,LOC108438403 coding upstream 1111922 27981070 ~ 28037700 (-)
trnay-gua_24 NA non-coding downstream 130175 26735512 ~ 26735598 (-)
LOC122342580 NA non-coding downstream 133147 26731660 ~ 26732626 (-)
LOC122342214 NA non-coding downstream 176321 26688613 ~ 26689452 (-)
G31413 NA non-coding downstream 386840 26478716 ~ 26478933 (-)
G31402 NA non-coding downstream 431987 26428152 ~ 26433786 (-)
G31425 NA non-coding upstream 32558 26901706 ~ 26901995 (-)
trnae-cuc_27 NA non-coding upstream 69913 26939061 ~ 26939132 (-)
trnae-cuc_28 NA non-coding upstream 83696 26952844 ~ 26952915 (-)
trnae-cuc_29 NA non-coding upstream 89181 26958329 ~ 26958399 (-)
trnak-cuu_2 NA non-coding upstream 97830 26966978 ~ 26967048 (-)
G31400 LOC102197881 other downstream 540537 26324479 ~ 26325236 (-)
G31394 NA other downstream 690524 26173699 ~ 26175249 (-)
G31314 NA other downstream 1304575 25559040 ~ 25561198 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other downstream 2104987 24754056 ~ 24760786 (-)
LOC122342340 NA other downstream 2538510 24323970 ~ 24327263 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 497264 27366412 ~ 27367649 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other upstream 509911 27379059 ~ 27382827 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other upstream 514605 27383753 ~ 27389398 (-)
G31503 pvrl2l,LOC107549846,LOC107665153,LOC107554349,LOC107752518,LOC107753776,LOC107666334 other upstream 670207 27539355 ~ 27615941 (-)
G31508 LOC106519560,LOC107665151,LOC102211354,LOC101487824,LOC102313318,LOC102779181 other upstream 773544 27642692 ~ 27644732 (-)

Expression


Co-expression Network