cep83 (LOC107694167,LOC107738819,LOC107591083,LOC107699054)


Basic Information

Item Value
gene id cep83
gene name LOC107694167,LOC107738819,LOC107591083,LOC107699054
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10414195 ~ 10421161 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236164.1
ATGGAGCAGATGAACCCTCCGGCGTTGGGGCAGTCGTCTGCCCTGTTCCCAAACCTGGAGCCGGCAGGAGGAGGTGGGAAAGCCGCGGTCCTTCTCAGCGGCTCTACGGGACTCGGCAGCTCCGACATGGAGCTCCAGAAGATGCTCATCGATGAGAGGATGCGCTGCGAGAACCACAAGACCAACTATCAGACCTTGAAAGCGGAGCACACCAGGCTGCAGGATGAATACACGCGTGCACAGAGCGAACTGAAACGCCTGCTCGGCGATCGCCACGTCTCTCAGGAGAAGCAGCAGCTGCTGATGGCTGAGCTCAGGGGAGAACTGCTGGACAAAACGCGTGAGCTGGAGGAGCTCCGACTGCAGGTGCTGACCCCTCAGCGGCTGGAGCTCTTGAAAGCACAGGTGCAGCAGGAGTTGGAGGCTCCCATCAGAGAACGCTTCAACAAACTGCAAGAGGAAGCAGAGAACTACAGGTCTGAGTATAACAAGCTGCGTTACGACCTTACTTTCCTCAAGTCGGAGTTTGATCACCAGAAAGAGGAGCACGTTCGAGTGCTGGAGGAAAGGCGGATACGGCACGAAGCTGATGTTGCCCGACTCGAGCACGATAAGGAGGACCTGGCCGCTCAGCTGCAGAGCGGAGACCCATCGCGGGATGGGAAGCGCGTTGAAGCCCTGCTGAGGGAGAAGGCCCAGCTCCACCAGCGGCTCAAAGGACTGGAGGCGGAGGTCACCGAACTCAGGGCGGAGAGAAATAACTCGGGTGCTCAGGCCGAAAATGTGCAGCGGATCCAGATACGACAGCTGGCTGAATCCCAGGCTGCAGTAAAGGCACTGGAGGCAGAGAAGCAGTCTATTCGTATGCAGTTGGACAGAACCGAAAGTGAACTCCGTCTATCTCAGGAACAAAACACACTCCTCACAGGCAAACTGCACAAAGCCGAAAGGGAAATCAATTCCCTCAGCAGTCAGATTGAAGAGATGAAGCACACGCATAAGCTGGACTTGAGTAATGTAAAACTAGAGTGTGTCAGAGCCAAAGGAGAACTAGAAAGAGACCGAGATACACTGCATTGCCAAGTAGAGGGTCTGCAGTCCGATATTGAGGTCCTGAAATCAGCGttggaaagaaataaagagctGATATCTGAAAAAGAGCGCGAGATGGTGCGCAGGGTCCAGGCAGCAAGAGAGGAGGAGATACACAAGATGGCCGTCCTTCAGGAAGAAAAGCTGGAGCTGGAGAATCGTTTATCTGAGTTTGAACAGCAGAGAGCTCTTCAGGAGGCAACGGGGAGCTTTCAGAAAGAGGAATGGGAGGAGCGTCTCCGTGCCGCGCAGCTGAGCGAAGAGTCTGTTCGCAAGGAACTTCAAAACCTGAGAGTCAAAATACAGCAGCAGGGCCAACAGCTGGAAGAGCTGGAGACCTCAAGAGCAGAAAGCGCAGACCTGAAACGACAAAACGCTGAGCTGAATCTACAGATAGGAGCCCTGTCTCACTCTGAGAGCGAGCTCTTGGACACCAACGGCAGACTGAGAGAAAGCCTAGAGCGAGTAAGAGAGGACCTACGGAGCGCCCGCGCGCAGATGGAACGGACCCAGCAGGAAGCCGAGAGGTTGGTGGAGGAAAGGCGAGTGGAATGGCTGGAGGAGAAACACAAGCTGcaggaaagagaagaagagcTGCGGGAGAAATACAGCCAGGCCAAAGAGCGCCTGCAGAGGGCAGCATTTGCGCAGAAAAAGAGGAAAACCATGACagaactgaaagaaaacaaactccAAGACAAGATTCAGCTCTTAGAAGCCAAGATAGAAGAACTTGAAATCGAAGCGAGCACAGCCAGAAAGAAATCGTACTCTGAAGAACATGCTCAGCTTAGCAAGCGTCTGAAGGAGCTGCAGAGGAGACACAATGAGTTTCGCCGTCTGTTGCTGGGCAACCAAATGACCTCCTCCACCCCTCTGGCCCAATCCCTCCTCATCCCGGCAGAGTCCATCTTCTCGAACATACAGGAGGATCAGCACCAGAGGGAGTTGTCTGTGCTGCGAAGACGCTTGGAAGAGTTGGAAAACAGTCAGCAACAGCAGCTGGAAGAACTGACCGCTCCTCTGGACAGAGACCGAGAGAGACTCTCGAGCCCACGGGACGTGCTTCCAGACTTTTCTTAACCACTACCTGCGTGATTACATTCACCACGTGCCAAAAACCGAACACACTGTGAcatgttttctcttttaaacgACTCGTGGTGCTTTGCAGCAGAAAGCTGGAGGATGTTTTAAGAAAAACCCGCCgcgttatttattaattgtctGGGGACAGGGCTTCTAAAGTTTACATAAGTTGTCGGTTTCTGttacagggtttttttgtacatattgAAAATAATCTGTAACATGTTTCAATGCTAAGAAGCCGTGTTTTATACGAGTCCAAATGGGAGAGAGCACCTTTTCATCCTTTTTCATCAAGTTAAACTGTAGTTTGTCACTATAGGGAGGAGACAGTGCATGGGTAGCAggtattttgataaataataatgattttattcttGCTTGTCTCTAAAAGCACTCAACccgaaatgtgttttttttaaataaagaacattGTGTCCTCA
>XM_043236165.1
tttgaaaggcgCTCGCAGCCGCCATCGTCTTCACGTAACAGTGCGTCGCTGTCAGTCTCGGATCAGATGAACCCTCCGGCGTTGGGGCAGTCGTCTGCCCTGTTCCCAAACCTGGAGCCGGCAGGAGGAGGTGGGAAAGCCGCGGTCCTTCTCAGCGGCTCTACGGGACTCGGCAGCTCCGACATGGAGCTCCAGAAGATGCTCATCGATGAGAGGATGCGCTGCGAGAACCACAAGACCAACTATCAGACCTTGAAAGCGGAGCACACCAGGCTGCAGGATGAATACACGCGTGCACAGAGCGAACTGAAACGCCTGCTCGGCGATCGCCACGTCTCTCAGGAGAAGCAGCAGCTGCTGATGGCTGAGCTCAGGGGAGAACTGCTGGACAAAACGCGTGAGCTGGAGGAGCTCCGACTGCAGGTGCTGACCCCTCAGCGGCTGGAGCTCTTGAAAGCACAGGTGCAGCAGGAGTTGGAGGCTCCCATCAGAGAACGCTTCAACAAACTGCAAGAGGAAGCAGAGAACTACAGGTCTGAGTATAACAAGCTGCGTTACGACCTTACTTTCCTCAAGTCGGAGTTTGATCACCAGAAAGAGGAGCACGTTCGAGTGCTGGAGGAAAGGCGGATACGGCACGAAGCTGATGTTGCCCGACTCGAGCACGATAAGGAGGACCTGGCCGCTCAGCTGCAGAGCGGAGACCCATCGCGGGATGGGAAGCGCGTTGAAGCCCTGCTGAGGGAGAAGGCCCAGCTCCACCAGCGGCTCAAAGGACTGGAGGCGGAGGTCACCGAACTCAGGGCGGAGAGAAATAACTCGGGTGCTCAGGCCGAAAATGTGCAGCGGATCCAGATACGACAGCTGGCTGAATCCCAGGCTGCAGTAAAGGCACTGGAGGCAGAGAAGCAGTCTATTCGTATGCAGTTGGACAGAACCGAAAGTGAACTCCGTCTATCTCAGGAACAAAACACACTCCTCACAGGCAAACTGCACAAAGCCGAAAGGGAAATCAATTCCCTCAGCAGTCAGATTGAAGAGATGAAGCACACGCATAAGCTGGACTTGAGTAATGTAAAACTAGAGTGTGTCAGAGCCAAAGGAGAACTAGAAAGAGACCGAGATACACTGCATTGCCAAGTAGAGGGTCTGCAGTCCGATATTGAGGTCCTGAAATCAGCGttggaaagaaataaagagctGATATCTGAAAAAGAGCGCGAGATGGTGCGCAGGGTCCAGGCAGCAAGAGAGGAGGAGATACACAAGATGGCCGTCCTTCAGGAAGAAAAGCTGGAGCTGGAGAATCGTTTATCTGAGTTTGAACAGCAGAGAGCTCTTCAGGAGGCAACGGGGAGCTTTCAGAAAGAGGAATGGGAGGAGCGTCTCCGTGCCGCGCAGCTGAGCGAAGAGTCTGTTCGCAAGGAACTTCAAAACCTGAGAGTCAAAATACAGCAGCAGGGCCAACAGCTGGAAGAGCTGGAGACCTCAAGAGCAGAAAGCGCAGACCTGAAACGACAAAACGCTGAGCTGAATCTACAGATAGGAGCCCTGTCTCACTCTGAGAGCGAGCTCTTGGACACCAACGGCAGACTGAGAGAAAGCCTAGAGCGAGTAAGAGAGGACCTACGGAGCGCCCGCGCGCAGATGGAACGGACCCAGCAGGAAGCCGAGAGGTTGGTGGAGGAAAGGCGAGTGGAATGGCTGGAGGAGAAACACAAGCTGcaggaaagagaagaagagcTGCGGGAGAAATACAGCCAGGCCAAAGAGCGCCTGCAGAGGGCAGCATTTGCGCAGAAAAAGAGGAAAACCATGACagaactgaaagaaaacaaactccAAGACAAGATTCAGCTCTTAGAAGCCAAGATAGAAGAACTTGAAATCGAAGCGAGCACAGCCAGAAAGAAATCGTACTCTGAAGAACATGCTCAGCTTAGCAAGCGTCTGAAGGAGCTGCAGAGGAGACACAATGAGTTTCGCCGTCTGTTGCTGGGCAACCAAATGACCTCCTCCACCCCTCTGGCCCAATCCCTCCTCATCCCGGCAGAGTCCATCTTCTCGAACATACAGGAGGATCAGCACCAGAGGGAGTTGTCTGTGCTGCGAAGACGCTTGGAAGAGTTGGAAAACAGTCAGCAACAGCAGCTGGAAGAACTGACCGCTCCTCTGGACAGAGACCGAGAGAGACTCTCGAGCCCACGGGACGTGCTTCCAGACTTTTCTTAACCACTACCTGCGTGATTACATTCACCACGTGCCAAAAACCGAACACACTGTGAcatgttttctcttttaaacgACTCGTGGTGCTTTGCAGCAGAAAGCTGGAGGATGTTTTAAGAAAAACCCGCCgcgttatttattaattgtctGGGGACAGGGCTTCTAAAGTTTACATAAGTTGTCGGTTTCTGttacagggtttttttgtacatattgAAAATAATCTGTAACATGTTTCAATGCTAAGAAGCCGTGTTTTATACGAGTCCAAATGGGAGAGAGCACCTTTTCATCCTTTTTCATCAAGTTAAACTGTAGTTTGTCACTATAGGGAGGAGACAGTGCATGGGTAGCAggtattttgataaataataatgattttattcttGCTTGTCTCTAAAAGCACTCAACccgaaatgtgttttttttaaataaagaacattGTGTCCTCA

Function

NR:

description
Host cell factor 2

GO: NA

KEGG:

id description
K16754 CEP83, CCDC41; centrosomal protein CEP83

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236164.1 False 2624 mRNA 0.51 15 10414195 10420501
XM_043236165.1 True 2681 mRNA 0.52 16 10414195 10421161

Neighbor

gene id symbol gene type direction distance location
si:dkey-159a18.1 LOC107694153,LOC107591329,LOC107738834,LOC107699055 coding downstream 460 10404599 ~ 10413735 (-)
fam3c fam3c,LOC107738818,LOC107694166,LOC107699057,LOC107733009 coding downstream 10437 10398091 ~ 10403758 (-)
dennd6b dennd6b,LOC107738816,LOC107590515,LOC107694164,LOC107732989,LOC107557304 coding downstream 32480 10373628 ~ 10381715 (-)
atp6v1f atp6v1f,LOC107590479,LOC101079638,LOC107557307,LOC106511462 coding downstream 48611 10364105 ~ 10365584 (-)
drd4-rs drd4-rs,LOC107591318,LOC107738833,LOC107557292,LOC107732971,LOC107699035,LOC108432516 coding downstream 94022 10301342 ~ 10320173 (-)
lrrc17 lrrc17,LOC107738820,LOC107694168,LOC107591338,LOC107699038,LOC107557290 coding upstream 2771 10423932 ~ 10433495 (-)
LOC122342631 NA coding upstream 25484 10446645 ~ 10448364 (-)
fgl2a fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052 coding upstream 27678 10448839 ~ 10451807 (-)
LOC122342626 gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096 coding upstream 42600 10463761 ~ 10476981 (-)
stk38l stk38l,LOC107738822,LOC107590537,LOC107694172,LOC107699048 coding upstream 56052 10477213 ~ 10484101 (-)
G27883 NA non-coding downstream 24390 10389447 ~ 10389805 (-)
LOC122343524 NA non-coding downstream 64904 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 276139 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 398441 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 669408 9697696 ~ 9744787 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding upstream 25274 10446435 ~ 10562772 (-)
G27910 NA non-coding upstream 228737 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 293469 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 509436 10930597 ~ 10932401 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding upstream 705341 11126502 ~ 11259483 (-)
zgc:193726 NA other downstream 50629 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1114016 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1404891 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1472792 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1539597 8870215 ~ 8874598 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 63761 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 103370 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 993559 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1232309 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1420804 11841965 ~ 11996639 (-)

Expression


Co-expression Network