fbxo18 (LOC107743400,LOC107658809,LOC107656287,LOC107581284)


Basic Information

Item Value
gene id fbxo18
gene name LOC107743400,LOC107658809,LOC107656287,LOC107581284
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4832410 ~ 4840605 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236167.1
CACATGAGAGCACAATCTTGAAAGCAGCATGAAGTTCAAGTGCATAATGAGAGCTTGGGCGATGTTTGGAGTAGCCTAGAGATGCAGATAGGGTTGTGTGCAATTCCTGAAGTATATTTAGAGACTCTGTTTacttacaaatacaaacaagGAAGGGCCAAACGCAGGCACTTGGGGCCCTCAGAATGTAACGACCTGGTGCAAAGCACGTCTCTCACACAGCCTTTCAATGTTAACCTCAGCCACACAGATCCAAACCGAGGACTTCAGCCGAGGACCCCCACCAAAAGAAGCAGACAagGTGGTGCGGGACAGCAGAAAGGCATCACCAGCTTCTTCTCCGTCACCGGAGTCATCAGCACCAGCCCCCAAAAAGGAACCAAGACTCCAGTGAAGGAGGAGGAACGGGAACCGATCGGTCATCTCATcccaaaagaagaaaatgaagaagaaaagatTGAGGACTATATGGAAGGCATCACCGAGGACATGTTTGATGATGCCTTTGAGGTAGGAACTGCATCTGTCAAAAAAGAAGAATCGTTGGAAGTTGCTGTGACAAaagaagaggatgaagaggacCTGGTTGAAGCCATCCCCGATGCCTGCTTTGGGCTTCTAGGAGTGCAGGGGGGCCAGGAGGTGCCCAAGGGCCATGTCCAGGATCTGCCCGAGGAGGTCCTGAGGCAAGTGTTTGCACACCTTCCAGCAGATGACCTCTATCACAACATCAGCTTGGTGTGCCATCACTGGAAGGATGTCGTCATGGACCCCCAGTTTCTGCCGTGGAAGAAGCTGTACTGCAGATACCGTAAGCAGCAAAATGAGGCGCTGAAGGAGGTGAAGTCTATCCTTGATGACAATCACATTAACAGAAAGGATGACCTGTGTCTTCTCAATATGCTGAGGTACATGTCTCGGTTCAAACACAGCAAACGTGTGAATGTGAAGGACGTGTTGGCGTGTGTGAAAGCGCATCAGCTCTACGCTCAGGCTGAAGCCTGTATCAGAGTCAGAATCCCGGACATGGTGGATGACGAGGGTCCAAACCCTTGGTCTGCCATGGCCCTGATGTTGGTTCTGGCTGATGGGGTGAAAGATGTCTTGGACCTGGTGGCTCTCTTGCAGAAGTCTGGGTGTCTGCTGACAGCGGGGGGAATCTCCGAGTACTTGTGGGCCGTAGCGACTTTGCTCCTGGCAATGAGAAAGAACAATATTAACATAAGCAACAGGTGGCATTACAATATCTTTTATGTGCTGCACTTAATGGAGAACGCTCCTCCTCCTGCGGGCTTACAAGACAAAAGACAGTTTCTGACTCATGAGCAGCAGCAGATACTTAACCATGACATCCAGAGTAACCACGTTGTTAAAATAATGGCTTTTGCTGGCACTGGAAAGACGAGCACGCTCGTAAAATATGCTCAGCGAAGGCCGCATATGCGCTTTCTCTACTTGGCCTTCAACAAATCTGTGGCCATGCAAGCTCAGCAGTCATTTCCAAACAACGTCGAATGCAGTACTATCCATTCAATGGCGTTCAGAGCTGTGGGAGTGAGGtataaaaacatgaagaaaCTGTCCAATAACTTGCAGGTGTTTAGCGTGGCGTGGGTCTTGCCTAAAGGACTCGGAGGATTTGTCAACGCTAAAGTGGTGACGCAAACGCTCCAGAATTACTGGGCATCTGTAGACCGGCGCATTGGCCCGGAACACGTTCCACAcgaatacaaaaacacaaatggaTTGCTAGAATGCCCAGACGATCACAAAAAAATGGCATTTGCTGATGCTGCACAGACGTTGTGGGACCAAATGGTAGAGCTGAAGTCCAGAAAAGAGAGAGCGTACAACATGACCCATGATGGATACCTCAAACTCTGGCAGCTGAGTAAACCACAGCTGGGCCGATATGATGCCATATTTATTGATGAAGCTCAAGACTGCACACCagtcgTCATGGGCATCATGCTCTCTCAGAACTGTGGGAAAATCCTGGTTGGAGATCCTCATCAACAGATTTACACTTTCAGAGGAGCAGTCAATGCTTTGCATGAAGTTCCTCACACACACGTCTATTATCTCACACAGAGCTTTAGGTTTGGATCTGAAATTGCGTATATTGGTGCTGCAGTACTAGACAGCTGTAAGAAAGTGAAGCAGATATTGGTTGGTGGGAATCAGGATGgaagtGTTCGAGGGGaggacacacaaacactgcagcACCTGAAGTTGGGACAGAGGCTGCCTGAAGGGAACGTAGCCATTCTGAGTCGCTGTAATGTCACAGTTTTCAGCGAGGCTGTCCGACTCACAGACGCCAACCCCACCTGCACAATCTACATTGTAGGAGGTGTTGAAAACTTTGGGCTGGACAAAATCATGGATCTCTGGGTCCTGATGCAACCAGAGGACAAACGCAAGAATGAGAGCCTCCAGATCAAGGATTACTTTATCCGTAGTTTCTGCAAAGATAAGATGGGTGGATTCAGAGGTCTGAAGGCGTACGCCACGGCCTCAGAAGACCGCGAGCTAGAGGGCAAGCTAGCCGTGGTGGAAAAATACAACAAACGCATTCCAGAGCTGGTTAAACGCATCTACGATCGCGCCCAGAGAAGAGCAGAGTGCGCAGATTTTATCCTTGGTACGGTGCATAAGGCCAAAGGCCTGGAGTTCGACACAGTCGCTGTGACAGATGACTTCACAAAAGTATCATGTGCTCGACACAACCTGCAGGGAGTGGGCAGCTTtaatgcagCTGCAGCAAACGTCCCAGATGATGAGTGGAACCTGTTATACGTGGCCATCACTCGAGCCAAAAGAGCACTGTACATCACCAAGACCATCAGCAACATCCTAACGTTCACTGGGGAGTACTTCCTGAGGTCAGGGCTGACCGGCACTCTGCTGGGTGAAGAATTGTTTCTTGCCTGTTCCACTGAAGGCTGTCAGAACCACATCACTGCAGACGCTGTCCTCAGCATGAGCAAACTCCCTGTCAGATATATGGAGAGCGAGGATGCGGCCGGCGTTCTGTGTTTGACCTGTGTGGAGCAGCGTGTGGGACCTGCAGCCTTCCTGCTCTCTCCACCTGAACGGGTCAGAACCATGAACTATACCAATGAAAGAATAGGTTTGCCCATCAACGTCGCCATGCTGCTGTCTTTACTTTAAATCCCACATTTAAGTGCTCTTTTGCCTCTGTGTCTTCTggagtgattttttttgcacagttcttaaactttttttttttttttttttttttttcccattttttttttttt
>XM_043236168.1
aaagtaacatcCGAACTTTTAATTTGTAGTGACGCAGAGCGGAAATAGAGCGCTTTtgaagttgtgtttgtttgggtGGTCTGAAGTTAAATCTGTGACATTCTTGAAGTGAAACGTCTCGTCGTTTGTAAATCATGGAATCGTCCATGAGAGGAAGGGCCAAACGCAGGCACTTGGGGCCCTCAGAATGTAACGACCTGGTGCAAAGCACGTCTCTCACACAGCCTTTCAATGTTAACCTCAGCCACACAGATCCAAACCGAGGACTTCAGCCGAGGACCCCCACCAAAAGAAGCAGACAagGTGGTGCGGGACAGCAGAAAGGCATCACCAGCTTCTTCTCCGTCACCGGAGTCATCAGCACCAGCCCCCAAAAAGGAACCAAGACTCCAGTGAAGGAGGAGGAACGGGAACCGATCGGTCATCTCATcccaaaagaagaaaatgaagaagaaaagatTGAGGACTATATGGAAGGCATCACCGAGGACATGTTTGATGATGCCTTTGAGGTAGGAACTGCATCTGTCAAAAAAGAAGAATCGTTGGAAGTTGCTGTGACAAaagaagaggatgaagaggacCTGGTTGAAGCCATCCCCGATGCCTGCTTTGGGCTTCTAGGAGTGCAGGGGGGCCAGGAGGTGCCCAAGGGCCATGTCCAGGATCTGCCCGAGGAGGTCCTGAGGCAAGTGTTTGCACACCTTCCAGCAGATGACCTCTATCACAACATCAGCTTGGTGTGCCATCACTGGAAGGATGTCGTCATGGACCCCCAGTTTCTGCCGTGGAAGAAGCTGTACTGCAGATACCGTAAGCAGCAAAATGAGGCGCTGAAGGAGGTGAAGTCTATCCTTGATGACAATCACATTAACAGAAAGGATGACCTGTGTCTTCTCAATATGCTGAGGTACATGTCTCGGTTCAAACACAGCAAACGTGTGAATGTGAAGGACGTGTTGGCGTGTGTGAAAGCGCATCAGCTCTACGCTCAGGCTGAAGCCTGTATCAGAGTCAGAATCCCGGACATGGTGGATGACGAGGGTCCAAACCCTTGGTCTGCCATGGCCCTGATGTTGGTTCTGGCTGATGGGGTGAAAGATGTCTTGGACCTGGTGGCTCTCTTGCAGAAGTCTGGGTGTCTGCTGACAGCGGGGGGAATCTCCGAGTACTTGTGGGCCGTAGCGACTTTGCTCCTGGCAATGAGAAAGAACAATATTAACATAAGCAACAGGTGGCATTACAATATCTTTTATGTGCTGCACTTAATGGAGAACGCTCCTCCTCCTGCGGGCTTACAAGACAAAAGACAGTTTCTGACTCATGAGCAGCAGCAGATACTTAACCATGACATCCAGAGTAACCACGTTGTTAAAATAATGGCTTTTGCTGGCACTGGAAAGACGAGCACGCTCGTAAAATATGCTCAGCGAAGGCCGCATATGCGCTTTCTCTACTTGGCCTTCAACAAATCTGTGGCCATGCAAGCTCAGCAGTCATTTCCAAACAACGTCGAATGCAGTACTATCCATTCAATGGCGTTCAGAGCTGTGGGAGTGAGGtataaaaacatgaagaaaCTGTCCAATAACTTGCAGGTGTTTAGCGTGGCGTGGGTCTTGCCTAAAGGACTCGGAGGATTTGTCAACGCTAAAGTGGTGACGCAAACGCTCCAGAATTACTGGGCATCTGTAGACCGGCGCATTGGCCCGGAACACGTTCCACAcgaatacaaaaacacaaatggaTTGCTAGAATGCCCAGACGATCACAAAAAAATGGCATTTGCTGATGCTGCACAGACGTTGTGGGACCAAATGGTAGAGCTGAAGTCCAGAAAAGAGAGAGCGTACAACATGACCCATGATGGATACCTCAAACTCTGGCAGCTGAGTAAACCACAGCTGGGCCGATATGATGCCATATTTATTGATGAAGCTCAAGACTGCACACCagtcgTCATGGGCATCATGCTCTCTCAGAACTGTGGGAAAATCCTGGTTGGAGATCCTCATCAACAGATTTACACTTTCAGAGGAGCAGTCAATGCTTTGCATGAAGTTCCTCACACACACGTCTATTATCTCACACAGAGCTTTAGGTTTGGATCTGAAATTGCGTATATTGGTGCTGCAGTACTAGACAGCTGTAAGAAAGTGAAGCAGATATTGGTTGGTGGGAATCAGGATGgaagtGTTCGAGGGGaggacacacaaacactgcagcACCTGAAGTTGGGACAGAGGCTGCCTGAAGGGAACGTAGCCATTCTGAGTCGCTGTAATGTCACAGTTTTCAGCGAGGCTGTCCGACTCACAGACGCCAACCCCACCTGCACAATCTACATTGTAGGAGGTGTTGAAAACTTTGGGCTGGACAAAATCATGGATCTCTGGGTCCTGATGCAACCAGAGGACAAACGCAAGAATGAGAGCCTCCAGATCAAGGATTACTTTATCCGTAGTTTCTGCAAAGATAAGATGGGTGGATTCAGAGGTCTGAAGGCGTACGCCACGGCCTCAGAAGACCGCGAGCTAGAGGGCAAGCTAGCCGTGGTGGAAAAATACAACAAACGCATTCCAGAGCTGGTTAAACGCATCTACGATCGCGCCCAGAGAAGAGCAGAGTGCGCAGATTTTATCCTTGGTACGGTGCATAAGGCCAAAGGCCTGGAGTTCGACACAGTCGCTGTGACAGATGACTTCACAAAAGTATCATGTGCTCGACACAACCTGCAGGGAGTGGGCAGCTTtaatgcagCTGCAGCAAACGTCCCAGATGATGAGTGGAACCTGTTATACGTGGCCATCACTCGAGCCAAAAGAGCACTGTACATCACCAAGACCATCAGCAACATCCTAACGTTCACTGGGGAGTACTTCCTGAGGTCAGGGCTGACCGGCACTCTGCTGGGTGAAGAATTGTTTCTTGCCTGTTCCACTGAAGGCTGTCAGAACCACATCACTGCAGACGCTGTCCTCAGCATGAGCAAACTCCCTGTCAGATATATGGAGAGCGAGGATGCGGCCGGCGTTCTGTGTTTGACCTGTGTGGAGCAGCGTGTGGGACCTGCAGCCTTCCTGCTCTCTCCACCTGAACGGGTCAGAACCATGAACTATACCAATGAAAGAATAGGTTTGCCCATCAACGTCGCCATGCTGCTGTCTTTACTTTAAATCCCACATTTAAGTGCTCTTTTGCCTCTGTGTCTTCTggagtgattttttttgcacagttcttaaactttttttttttttttttttttttttcccattttttttttttt

Function

NR:

description
F-box DNA helicase 1-like

GO:

id name namespace
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K10300 FBXO18; F-box protein, helicase, 18

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236167.1 False 3284 mRNA 0.49 22 4832410 4840605
XM_043236168.1 True 3286 mRNA 0.49 21 4833433 4840605

Neighbor

gene id symbol gene type direction distance location
adm2a LOC107592207,LOC107743397,LOC107726065,LOC107580886,LOC107656286 coding upstream 4758 4817048 ~ 4827652 (+)
tspan12 tspan12,LOC107592202,LOC107658802,LOC107656244,LOC107565667,LOC107744106 coding upstream 403015 4415145 ~ 4429395 (+)
tmem243b tmem243b,tmem243,LOC107592214,LOC107744120,LOC107580823,LOC107656297 coding upstream 652093 4176998 ~ 4180317 (+)
meig1 meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135 coding upstream 655800 4175425 ~ 4176610 (+)
hspa14 hspa14,LOC107658827,LOC107592213,LOC107580804,LOC107656298 coding upstream 661721 4164737 ~ 4170689 (+)
glt8d2 glt8d2 coding downstream 1088 4841693 ~ 4847744 (+)
ttc41 LOC107656216,LOC107743954,LOC107581281 coding downstream 13460 4854065 ~ 4861148 (+)
parp12b parp12b,LOC107726044,LOC107592257,LOC107743438,LOC107658812,LOC107656291,LOC107581297 coding downstream 20723 4861328 ~ 4867182 (+)
si:dkeyp-27e10.3 si:dkeyp-27e10.3,LOC107726043,LOC107743425,LOC107656289,LOC107580867,LOC107592246 coding downstream 27417 4868022 ~ 4888613 (+)
LOC122343294 svopl,LOC107725968,LOC107658766,LOC107744112,LOC107656247 coding downstream 48818 4889423 ~ 4894735 (+)
G26008 NA non-coding upstream 64589 4765864 ~ 4767821 (+)
G25976 LOC107743325,LOC107658806,LOC107580925 non-coding upstream 88807 4730837 ~ 4743603 (+)
G25981 flncb,LOC107592205 non-coding upstream 141627 4689375 ~ 4690783 (+)
G25941 NA non-coding upstream 396773 4432605 ~ 4435637 (+)
G25940 NA non-coding upstream 400452 4431623 ~ 4431958 (+)
G26043 NA non-coding downstream 140604 4981209 ~ 4994260 (+)
LOC122343429 NA non-coding downstream 142616 4983221 ~ 4985211 (+)
LOC122342533 NA non-coding downstream 145574 4986179 ~ 4988188 (+)
LOC122342534 NA non-coding downstream 148562 4989167 ~ 4991312 (+)
LOC122343284 NA non-coding downstream 151469 4992074 ~ 4994254 (+)
G25958 NA other upstream 203511 4550163 ~ 4628899 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 597166 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 601318 4229629 ~ 4231092 (+)
G25551 NA other upstream 1093816 3737502 ~ 3738594 (+)
G25514 NA other upstream 1330316 3481629 ~ 3502094 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 88866 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 513727 5354332 ~ 5397886 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 941339 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 1022002 5862607 ~ 5898827 (+)
vhll NA other downstream 1547938 6388543 ~ 6390927 (+)

Expression


Co-expression Network