LOC122342410


Basic Information

Item Value
gene id LOC122342410
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1115391 ~ 1120658 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236180.1
taaactgaaaataaagttaCTAATTAACTTCTTTTATCCAGAATCGATTTGCCTGTCATCACCTGCCCTCTATAAAATCACATATAAAAGTCTTTAGGTTCCTTCAGTACATTGTCAAATGAAATAGTCTTCTCACCAGATGCTGGTTTAAACACGTTGAACACGACTAAGATGTTCCTTCACGCGCTGCTCCTTCTCTGTGCTTTTCCTCCTTCGTCTGCTAAAGGACGGCTGAGAGAATTCCACATACTACACTATCGGAGTCTGATAAAGTCTGCCGTAGAAGAATGCACGAGAAACTACACTAACCTCGTCACGGTTTATGACCGAGAAGATGATATAGAACTCAGCACGCAGTTAGATAAACTGTTCAAACGTAATGTTATCGAAAGCCCTACCGGCTGGATTGGTGCATATTTAGGAAGATGCAGTAAAAAATGGTCAAACGGCGACGAGGTcaatgaaaatattacaaaaaatattaaaaaggattGTGCTAACGAATGCTGCGCTACAATGCTAACTAATGGAGATTGGTACCTTAACACATGCAATCTTAGCAAACCATTCCTGTGTTATGAACAAGAAGCTGGACGAGCATCATACAACTACGTGTACATCGACGTTAAAAAAACCTGGTTTGAAGCTCAGCTGTACTGCAGAGAGAAACACGTCGATTTAGTCAGTATCAGAAATGAGAAGGAAAACGAACAAGTGAAGATAAAACTACAAAAGACTTGCTGGATCGGCCTGCTGGAGGACGGTGTGAAATGGAGTGACGAAGGACAATCCGCTTACAGAAAATGGACAAATGAAGATCTGCCAAATAAAGGCCATGTTTACATGAGTGCATTTGCGAATTGGACAGTTGACATCCAAGAATCCAACAAATTCTATCCTATATGCTACAaAAGCTTCATTTACGTCAGTCCTGGTCACATGTCTTGGGAGAAGGCTCTGGATCACTGCAACACTCAAAACAATACAGCCGGGCTTCTGCGCATCGAGTCTGAGGACGATCAGATAGAAACAGAGCGAGAGCTAAAAAGACAGAAGATCTCGGGGCCGGTGTGGATCGGGCTTAGACAGAGTCGACTTTTCGGGTTCTGGATTTGGTCCAACGGGCTTCAGCTGGGACCCTGGACCAACTGGAAAGAAGGAAGCGCTCCAGAACATCAGATATCCGAGCACTGCGGGGCCATGGAGAAGGTGAACGGTCAATATAAATGGAGCGATAAAGACTGCAGATCTGCGTTTAGAGTTTTATGTGAGGGGAAATGACAGCACTGAACTAACGTCTTACTTTTGCTATGTGCTTTAGTTGATTTTTTTGCCCAATAATTCATTACCGCCGTTTCGGTTTGTCAAATAATTCAACAAACACTGTTTTCTatgcaagcaaacaaacacactggtttttttccccccaagtTTAACACAAAGTTAAGGACTGAATAGAGCAGCGAACTGGCATAAAATTCTATGCACTTCGGGATCAGATTTTATTCCTATTCAAAAAGCTACATGTAGAGATTGTATCAccgactgaaaaaaaaaattaaatagttaatgCATAAGTA
>XM_043236181.1
tgtaaactgaaaataaagttaCTAATTAACTTCTTTTATCCAGAATCGATTTGCCTGTCATCACCTGCCCTCTATAAAATCACATATAAAAGTCTTTAGGTTCCTTCAGTACATTGTCAAATGAAATAGTCTTCTCACCAGATGCTGGTTTAAACACGTTGAACACGACTAAGATGTTCCTTCACGCGCTGCTCCTTCTCTGTGCTTTTCCTCCTTCGTCTGCTAAAGGACGGCTGAGAGAATTCCACATACTACACTATCGGAGTCTGATAAAGTCTGCCGTAGAAGAATGCACGAGAAACTACACTAACCTCGTCACGGTTTATGACCGAGAAGATGATATAGAACTCAGCACGCAGTTAGATAAACTGTTCAAACGTAATGTTATCGAAAGCCCTACCGGCTGGATTGGTGCATATTTAGGAAGATGCAGTAAAAAATGGTCAAACGGCGACGAGGTcaatgaaaatattacaaaaaatattaaaaaggattGTGCTAACGAATGCTGCGCTACAATGCTAACTAATGGAGATTGGTACCTTAACACATGCAATCTTAGCAAACCATTCCTGTGTTATGAACAAGAAGCTGGACGAGCATCATACAACTACGTGTACATCGACGTTAAAAAAACCTGGTTTGAAGCTCAGCTGTACTGCAGAGAGAAACACGTCGATTTAGTCAGTATCAGAAATGAGAAGGAAAACGAACAAGTGAAGATAAAACTACAAAAGACTTGCTGGATCGGCCTGCTGGAGGACGGTGTGAAATGGAGTGACGAAGGACAATCCGCTTACAGAAAATGGACAAATGAAGATCTGCCAAATAAAGGCCATGTTTACATGAGTGCATTTGCGAATTGGACAGTTGACATCCAAGAATCCAACAAATTCTATCCTATATGCTACAaAAGCTTCATTTACGTCAGTCCTGGTCACATGTCTTGGGAGAAGGCTCTGGATCACTGCAACACTCAAAACAATACAGCCGGGCTTCTGCGCATCGAGTCTGAGGACGATCAGATAGAAACAGAGCGAGAGCTAAAAAGACAGAAGATCTCGGGGCCGGTGTGGATCGGGCTTAGACAGAGTCGACTTTTCGGGTTCTGGATTTGGTCCAACGGGCTTCAGCTGGGACCCTGGACCAACTGGAAAGAAGGAAGCGCTCCAGAACATCAGATATCCGAGCACTGCGGGGCCATGGAGAAGATCTGGAGAGCAATGGAcgcactgcagtgaatgggtgccgtcagaatgagaataaaaacatcacgatatCACACAAGTAACCCACTCCGCTCCAGCCCATCATCTTCTGAAGCAAAAAGCTGTATGTTTGCAGGAAAAACTAAATCGTATTTAAggtgttttaactttaattagtccataatccataataaagcttcatccagtaaaaaaaaagtgctccaTATTTTTACAGAACTGATTTCATTGCTTGATTTAAACATAttcctctttttattttcattttcaatgctCTCAAGAAAGCAATGATAGCCTGAAGGTGTattattctcaaactttaatgCAAATTTCTGTAAAGATTTATTCAGTTAagctttaattattaaattgtaaagcatttatgaataatgtaataatatttgttgtactgtctttaaatgcaatgttttatttttat

Function

GO:

id name namespace
GO:0042594 response to starvation biological_process
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236180.1 False 1580 mRNA 0.42 5 1118693 1120656
XM_043236181.1 True 1665 mRNA 0.40 6 1115391 1120658

Neighbor

gene id symbol gene type direction distance location
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding downstream 340830 643448 ~ 774561 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding downstream 474666 629065 ~ 640725 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding downstream 535046 500604 ~ 580345 (-)
cog5 cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192 coding downstream 666329 383479 ~ 449062 (-)
e2f7 e2f7,LOC107707966,LOC107658780,LOC107656240,LOC107576735,LOC107584022 coding downstream 732065 371870 ~ 383326 (-)
LOC122342412 NA coding upstream 2009 1122667 ~ 1125124 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding upstream 152648 1273306 ~ 1277391 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding upstream 157352 1278010 ~ 1281707 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding upstream 210364 1331022 ~ 1344030 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 347539 1468197 ~ 1473225 (-)
G24874 NA non-coding downstream 46492 1068340 ~ 1068899 (-)
G24870 NA non-coding downstream 146040 968474 ~ 969351 (-)
G24863 NA non-coding downstream 158042 953465 ~ 957349 (-)
G24830 NA non-coding downstream 189014 923639 ~ 926377 (-)
G24790 NA non-coding downstream 488458 626576 ~ 626933 (-)
LOC122343365 NA non-coding upstream 9688 1130346 ~ 1132035 (-)
G24917 NA non-coding upstream 130274 1250932 ~ 1252579 (-)
G24924 NA non-coding upstream 164547 1285205 ~ 1285466 (-)
G24926 NA non-coding upstream 165901 1286559 ~ 1287065 (-)
G24927 NA non-coding upstream 166598 1287256 ~ 1287737 (-)
G24875 NA other downstream 45295 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 182283 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 618523 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 773438 279998 ~ 341953 (-)
G24708 NA other downstream 924149 186460 ~ 191242 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 168656 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 459822 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 473626 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 488702 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 532933 1653591 ~ 1654826 (-)

Expression


Co-expression Network