LOC122342412


Basic Information

Item Value
gene id LOC122342412
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1122667 ~ 1125124 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236182.1
GAATAAGTCTGCTATTTCCTTCAGTTCAGCACACAACCAAATTATCTGCTAACCAGGACGTAACGCACTGTTCTCAACAGAGGCTATGTTCTGCTTGATTCAATTATCGCACCACGTGAAGAAGACCATTTCTTGATACCACTAAATAAACCGAGCATTGCCATGGTGCTTCTACCTGCCCTGCTTCTTCTCTGGGTTGCTCCCTTTTCAAGCTGTACAGATCGACTAAGAACAAAATTCTACTTGCAAGAACCACAAACGCAGATAAACGATGCAGTCAGTGCTTGTAGACACAACTACACTGACCTCGTCACAATCTACGATCGAGAAGAGAATATGACCGaagctaaaatattaataaatggatCTGATTGTAGCTGGATTGGAGCCAACGGTTGCACGTGGTCGAACGGCGATCCGGTCAGATTCATCAACTTCAGCAGAAATTCTGTGGAAAAATGCTGTGGCGCGCTGACCACTGGTAGAGAATGGGAATGTCTCAACTGCAGCTCAGAAATGTACTTCATGTGTTATAAAGAAGGTAATCGTACTTTAATCCCTGAAAACAAAACCTGGTTCGAGGCTCAGCTgtactgcaaaaacaatcaAAGCGATTTAGTCAGCATCAGAAACGAGACGGAAAACGAACAAGCGAAGGAAGCGTTGAACGGGACTAACTTTGTCTGGATTGGCCTTCAGTATAATTACAAGATTGTATGGTTTCATGATGGAACGTTTGATTACAAACAAGATGCTAAAGCATGCtttacatttctccaaaaccGTCCAACAAAACCTTGCAACGCAAGTCTTCTGAGTAACTGTGCTCCTCTTTGCTACAAAAAGTTAATTTATGTCAGTCGGGGTAACATGTCCTGGGAGGACGCTTTCACTCACTGCAGCAGTCTTAAGAAAAGACCCGGGCTCCTGCGCATCGAGTCTGAGGATGATCAGATAGAAACAGAGCGAGAGCTAAAAAGACAGAAGATCTCGGGGCCGGTGTGGATCGGGCTTAGACAGAGTCGACTTTTCGGATTCTGGATTTGGTCCAACGGGCTTCAGCTGGGACCCTGGACCAACTGGAAAGAAGAAAACTTTCCAGAACATCAAACGTCTCAGCACTGCGGGGCCATGGAGAACATGAACGGTCAATATAAATGGAGCGATAAAGACTGCAGGTCTACATTCAGAGCTTTATGTGAGGTAAATTAGTATGTGAACAATGGTATCGTCCATGTCTTGTGTAATAAAGCTCTGAGGTAGCAGTTAGTGTCATGTTCATCTCAttgaataattcattatatCATATTCCTGCTGTGTAATCCTTCATGCCTCATACTAAGAATTAACATTACAAGTTGTTCATGAATAAACTTTACATCAAGTTGTAAAACAGTAGACATGTTaagcattgcaaaaaaaaataaaaactgtctaATATCTAA
>XM_043236183.1
TGGGACTTTATCTGGGTTTTATTAGCTCTATTCCTTATCAAGATGAAGTTAATTTACAGTAACAATCGGTTTTCTGATCATATTGTATGTCATTGGTTTTGTCGATCCTCTAGGACGTAACGCACTGTTCTCAACAGAGGCTATGTTCTGCTTGATTCAATTATCGCACCACGTGAAGAAGACCATTTCTTGATACCACTAAATAAACCGAGCATTGCCATGGTGCTTCTACCTGCCCTGCTTCTTCTCTGGGTTGCTCCCTTTTCAAGCTGTACAGATCGACTAAGAACAAAATTCTACTTGCAAGAACCACAAACGCAGATAAACGATGCAGTCAGTGCTTGTAGACACAACTACACTGACCTCGTCACAATCTACGATCGAGAAGAGAATATGACCGaagctaaaatattaataaatggatCTGATTGTAGCTGGATTGGAGCCAACGGTTGCACGTGGTCGAACGGCGATCCGGTCAGATTCATCAACTTCAGCAGAAATTCTGTGGAAAAATGCTGTGGCGCGCTGACCACTGGTAGAGAATGGGAATGTCTCAACTGCAGCTCAGAAATGTACTTCATGTGTTATAAAGAAGGTAATCGTACTTTAATCCCTGAAAACAAAACCTGGTTCGAGGCTCAGCTgtactgcaaaaacaatcaAAGCGATTTAGTCAGCATCAGAAACGAGACGGAAAACGAACAAGCGAAGGAAGCGTTGAACGGGACTAACTTTGTCTGGATTGGCCTTCAGTATAATTACAAGATTGTATGGTTTCATGATGGAACGTTTGATTACAAACAAGATGCTAAAGCATGCtttacatttctccaaaaccGTCCAACAAAACCTTGCAACGCAAGTCTTCTGAGTAACTGTGCTCCTCTTTGCTACAAAAAGTTAATTTATGTCAGTCGGGGTAACATGTCCTGGGAGGACGCTTTCACTCACTGCAGCAGTCTTAAGAAAAGACCCGGGCTCCTGCGCATCGAGTCTGAGGATGATCAGATAGAAACAGAGCGAGAGCTAAAAAGACAGAAGATCTCGGGGCCGGTGTGGATCGGGCTTAGACAGAGTCGACTTTTCGGATTCTGGATTTGGTCCAACGGGCTTCAGCTGGGACCCTGGACCAACTGGAAAGAAGAAAACTTTCCAGAACATCAAACGTCTCAGCACTGCGGGGCCATGGAGAACATGAACGGTCAATATAAATGGAGCGATAAAGACTGCAGGTCTACATTCAGAGCTTTATGTGAGGTAAATTAGTATGTGAACAATGGTATCGTCCATGTCTTGTGTAATAAAGCTCTGAGGTAGCAGTTAGTGTCATGTTCATCTCAttgaataattcattatatCATATTCCTGCTGTGTAATCCTTCATGCCTCATACTAAGAATTAACATTACAAGTTGTTCATGAATAAACTTTACATCAAGTTGTAAAACAGTAGACATGTTaagcattgcaaaaaaaaataaaaactgtctaATATCTAA
>XM_043236184.1
TTCAGCACACAACCAAATTATCTGCTAACCAGATTCAATTATCGCACCACGTGAAGAAGACCATTTCTTGATACCACTAAATAAACCGAGCATTGCCATGGTGCTTCTACCTGCCCTGCTTCTTCTCTGGGTTGCTCCCTTTTCAAGCTGTACAGATCGACTAAGAACAAAATTCTACTTGCAAGAACCACAAACGCAGATAAACGATGCAGTCAGTGCTTGTAGACACAACTACACTGACCTCGTCACAATCTACGATCGAGAAGAGAATATGACCGaagctaaaatattaataaatggatCTGATTGTAGCTGGATTGGAGCCAACGGTTGCACGTGGTCGAACGGCGATCCGGTCAGATTCATCAACTTCAGCAGAAATTCTGTGGAAAAATGCTGTGGCGCGCTGACCACTGGTAGAGAATGGGAATGTCTCAACTGCAGCTCAGAAATGTACTTCATGTGTTATAAAGAAGGTAATCGTACTTTAATCCCTGAAAACAAAACCTGGTTCGAGGCTCAGCTgtactgcaaaaacaatcaAAGCGATTTAGTCAGCATCAGAAACGAGACGGAAAACGAACAAGCGAAGGAAGCGTTGAACGGGACTAACTTTGTCTGGATTGGCCTTCAGTATAATTACAAGATTGTATGGTTTCATGATGGAACGTTTGATTACAAACAAGATGCTAAAGCATGCtttacatttctccaaaaccGTCCAACAAAACCTTGCAACGCAAGTCTTCTGAGTAACTGTGCTCCTCTTTGCTACAAAAAGTTAATTTATGTCAGTCGGGGTAACATGTCCTGGGAGGACGCTTTCACTCACTGCAGCAGTCTTAAGAAAAGACCCGGGCTCCTGCGCATCGAGTCTGAGGATGATCAGATAGAAACAGAGCGAGAGCTAAAAAGACAGAAGATCTCGGGGCCGGTGTGGATCGGGCTTAGACAGAGTCGACTTTTCGGATTCTGGATTTGGTCCAACGGGCTTCAGCTGGGACCCTGGACCAACTGGAAAGAAGAAAACTTTCCAGAACATCAAACGTCTCAGCACTGCGGGGCCATGGAGAACATGAACGGTCAATATAAATGGAGCGATAAAGACTGCAGGTCTACATTCAGAGCTTTATGTGAGGTAAATTAGTATGTGAACAATGGTATCGTCCATGTCTTGTGTAATAAAGCTCTGAGGTAGCAGTTAGTGTCATGTTCATCTCAttgaataattcattatatCATATTCCTGCTGTGTAATCCTTCATGCCTCATACTAAGAATTAACATTACAAGTTGTTCATGAATAAACTTTACATCAAGTTGTAAAACAGTAGACATGTTaagcattgcaaaaaaaaataaaaactgtctaATATCTAA

Function

GO:

id name namespace
GO:0051186 obsolete cofactor metabolic process biological_process
GO:0006790 sulfur compound metabolic process biological_process
GO:0004418 hydroxymethylbilane synthase activity molecular_function

KEGG:

id description
ko00860 Porphyrin and chlorophyll metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236182.1 False 1445 mRNA 0.42 5 1122667 1125124
XM_043236183.1 True 1502 mRNA 0.42 4 1122667 1125062
XM_043236184.1 False 1380 mRNA 0.42 4 1122667 1125100

Neighbor

gene id symbol gene type direction distance location
LOC122342410 NA coding downstream 2009 1115391 ~ 1120658 (-)
plekha5 plekha5,LOC107656381,LOC107718544,LOC107590532,LOC107658747,LOC107707963,LOC107584023,LOC106609184 coding downstream 348106 643448 ~ 774561 (-)
aebp2 aebp2,LOC107708024,LOC107658952 coding downstream 481942 629065 ~ 640725 (-)
pde3a pde3a,LOC107590531,LOC107656239 coding downstream 542322 500604 ~ 580345 (-)
cog5 cog5,LOC107583928,LOC107658957,LOC107656447,LOC107590548,LOC107729135,LOC106609192 coding downstream 673605 383479 ~ 449062 (-)
lmod2b lmod2b,LOC107726005,LOC107584027,LOC107656401,LOC107581005,LOC107711505 coding upstream 148182 1273306 ~ 1277391 (-)
asb15b asb15b,LOC107726003,LOC107658939,LOC107583946,LOC107656400,LOC107581016,LOC107711503 coding upstream 152886 1278010 ~ 1281707 (-)
slc13a4 slc13a4,LOC107579393,LOC107656439,LOC107658938,LOC107584028 coding upstream 205898 1331022 ~ 1344030 (-)
gnsa gns,gnsa,LOC107658926,LOC107656403 coding upstream 343073 1468197 ~ 1473225 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding upstream 405668 1530792 ~ 1562547 (-)
G24874 NA non-coding downstream 53768 1068340 ~ 1068899 (-)
G24870 NA non-coding downstream 153316 968474 ~ 969351 (-)
G24863 NA non-coding downstream 165318 953465 ~ 957349 (-)
G24830 NA non-coding downstream 196290 923639 ~ 926377 (-)
G24790 NA non-coding downstream 495734 626576 ~ 626933 (-)
LOC122343365 NA non-coding upstream 5222 1130346 ~ 1132035 (-)
G24917 NA non-coding upstream 125808 1250932 ~ 1252579 (-)
G24924 NA non-coding upstream 160081 1285205 ~ 1285466 (-)
G24926 NA non-coding upstream 161435 1286559 ~ 1287065 (-)
G24927 NA non-coding upstream 162132 1287256 ~ 1287737 (-)
G24875 NA other downstream 52571 1069160 ~ 1070096 (-)
pik3cg pik3cg,LOC107658948,LOC107656384,LOC107583938,LOC107705338,LOC107590535,LOC107584052 other downstream 189559 864684 ~ 933108 (-)
slco1c1 slco1c1,LOC107708018,LOC107583931,LOC107658953,LOC107729145,LOC107656392,LOC107590530,LOC108435080 other downstream 625799 406642 ~ 496868 (-)
osbpl8 osbpl8,LOC107555879,LOC107656451 other downstream 780714 279998 ~ 341953 (-)
G24708 NA other downstream 931425 186460 ~ 191242 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other upstream 164190 1289314 ~ 1323397 (-)
LOC122342802 LOC107711465,LOC107656235 other upstream 455356 1580480 ~ 1586189 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other upstream 469160 1594284 ~ 1604690 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other upstream 484236 1609360 ~ 1618298 (-)
ccdc167 ccdc167 other upstream 528467 1653591 ~ 1654826 (-)

Expression


Co-expression Network