gpr85 (gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006)


Basic Information

Item Value
gene id gpr85
gene name gpr85,LOC107580073,LOC107710116,LOC107726048,LOC107658873,LOC107584006
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2467087 ~ 2471272 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236237.1
tgctgggatCACAAATAGCGCTAGTGCGCATGCGCCGTCCGCACCGTTTACTGTATAATCACAGTGGGGGAAAAAGAGCAGGCAACAAAACTAAAGCTTTTTTACGGCAAAGTGACTGCTGCCATGTAAATAACCGCCAGGGAAACAAAGGGGGAATATCAACagGGATCCTTTTAGGTGTGATGAGACAAAGGAACAAAGGATGCCTTAGAAGAGAGGCAGAGACGAACAAGGCTGGAACCTGCTTGAAAGCACACCAGATGGATCTATCGCTCCACGCTCCATCCAGATCATGATACTTGGCTAAAGCTTTAAGCGTTCTCTATGATCCCTTCTCCATCTATGGCGAACTACAGCCATGCAGGGGACCACAACATCTTGCAGAATGTCTCTCCGCTCGCCACTTTCCTTAAACTGACCTCCCTGGGTTTCATCATCGGCGTTGGCGTGGTCGGAAACCTCCTGATCTCCATCCTGCTGGTCAAAGACAAGAGCCTTCATCGAGCACCCTACTACTTCCTGCTGGACCTCTGCGCTTCGGACATCCTCCGCTCGGCCATCTGCTTCCCCTTCGTCTTCACCTCCGTCAAGAATGGCTCAGCCTGGACCTACGGCACGCTGACCTGCAAAGTGATCGCCTTCTTGGGCGTGCTCTCCTGTTTCCACACTGCCTTCATGCTGTTCTGCGTTAGCGTGACGCGGTACCTGGCCATCGCCCACCACCGCTTTTACACCAAGCGGCTGACCTTCTGGACATGCCTGGCCGTCATATGCATGGTGTGGACGCTGTCAGTAGCCATGGCGTTCCCTCCAGTGCTGGATGTGGGCACATACTCCTTCATCCGCGAGGAGGACCAGTGCACCTTCCAGCACCGCTCCTTCCGCGCCAATGACTCGTTGGGCTTCATGCTGCTCCTTGCACTCATCCTCCTGGCCACCCAGCTTGTCTACCTCAAGCTCATCTTTTTCGTCCACGACCGCCGAAAGATGAAGCCGGTGCAGTTCGTGCCCGCCGTCAGCCAGAACTGGACCTTCCACGGCCCGGGGGCGAGCGGCCAGGCTGCGGCGAACTGGCTGGCGGGCTTCGGCCGAGGCCCCACGCCTCCCACCCTGCTGGGAATCCGGCAGAACAGCAATGCGGCGGGCCGCAGGCGTCTGCTGGTGCTGGACGAGTTTAAGACTGAAAAGAGGATAAGCAGGATGTTCTACATCATTACCTTCTTCTTCTTGAGCCTGTGGGGACCCTACCTTGTAGCCTGCTACTGGAGGGTGTTCGCCCGAGGCCCAGTGATCCCGGGAGGCTACCTGACGGCCGCCGTATGGATGAGTTTCGCCCAGGCGGGAGTCAACCCATTCATCTGCATCTTCTCCAACCGGGAGCTCCGGAGATGCTTCAGCACCACGCTCCTCTACTGCAGAAAATCCAGGTTACCGAGGGAACCCTACTGTGTTATATGAAGGTTCGGTGGCGTTTCTTGTTTATCCGATGTGGTTTTTGTTGGGATGCCCTGGTCGATCAGGGATGTTGTACagctctctcctctcttctcccgTTCCTCTCGCTCCCTTTTCGAGGCCTGTAGTTGAACCGTCTGATGGAATATGATGATGAACGGACACGTCCCGCGTTTATGTTCTAGTAAACAACCGATGCGGAAGGCCATTTGAAACCcaacacgcaaaaaaaaaaaaagaaaaaagaaaaaaaaatcgaaaaaataaaacatggaaaaaaatggaaagaaaagaaaataaaaaaacggatACGTCGAGAAGGGACTGACCTTTGCTTTGGATATCTGGAAGACTCTGGAAAGGGTGTAAAGAAATCAAACTGTCACCTTACGGAATCACTGGAATTTGTGTCTAAAAAGTTGCACTAACGAGAAGACCCGAAGATGCTTTTTTCGCGCCGTTGCATTGCAAGGATGTCTTGTTTTTCCCAAACTGAAATACGAATGCTTTAATCTGCAACAGACTTCTCTTTCACTGTAAGTAAACAAAACATGTGGGGTGACTAACTCTGTTGGAATACACCTTCACGAGAGGATAAATTGGTTTAAATGTAAGTGatatcttttttccttttagggTGGGGTTGGGGCGGGCTGGTGGGCGGGTCTTAAGGGGCGGGTACTGTCGTGTGGTTTCCGGAATTGCAACTTAAATTATTTCCTGTAGTTTTATGATCCATATGGTATGTCTCTGTTGTCTGGCAATGTTATTTTCTTATCTCATTTTTCTAAGTCAAAAAACTACTGTTTGAATTTTAAAACGTTGCTCTTGAGAACCTTGTACTTAAACTGACAGTGGAGAACCAGTTAAGCTAAGTTCAGTGTGGCATATCCATGTACCCGAACACGCCAATTTTGTTACAGATTCCACTCCAGCTGTTCTTGCCTTAATGGTTCTGGtgttttcttcatgttttcatttcaaacgcGCTCCTCTAAAATGTCTCCTTGAGACATATCGGGAGGCTTTCCGCATCAGGGTGAAGTGCATGTTCATTTGAAACACGGTATCCACCACCACTATCACAGGCACAGCCCGTGCACCGACAGCCCATTTCTTACCCTGTAACGTTTGCTACACCCCACCGAGTGCGCAGAGCACAGGGAGCATGTGTGAGTGGACGTCtgtgcttgagtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgtgcgcgtgcttGGCGAACAGCTGTCATGTCAAGACCAGAGCCTTAGTCTGAAATCTTGcacaatttgtaaaaaatgtaataggaaaaacaaaaaacattgtatttaagGCACAGAGTCTTGTTTCTACTTTCCCAACATTTGCTCTCTACTAATTGTTTTGATTAACTTACTTTTTTCTCTTGTggccattttaatatttattctgtattctttttgtatattatagGTAGATAGTGTGTAAGTTTGTGAGTCTTTCATTTTGAAGTCCCGAATGTGAGTACTGTTTAAGTTAGGACTGCAATTGCTGAAAGTTAACTGTGTAATCTGTtgcttacatttttgaaaataaaattttacattttgcaaaa

Function

symbol description
gpr85 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in central nervous system and retina. Orthologous to human GPR85 (G protein-coupled receptor 85).

NR:

description
probable G-protein coupled receptor 85

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04302 SREB2, GPR85; super conserved receptor expressed in brain 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236237.1 True 3051 mRNA 0.48 2 2467087 2471272

Neighbor

gene id symbol gene type direction distance location
tmem168a tmem168a,LOC107658875,LOC107726047,LOC107710117,LOC107656353 coding downstream 43624 2415666 ~ 2423463 (-)
tnnt2e tnnt2e,LOC107658902,LOC107725993,LOC107656364,LOC107710083,LOC108425385 coding downstream 424226 2032823 ~ 2042861 (-)
arl1 arl1,LOC107576237 coding downstream 442878 2022325 ~ 2024209 (-)
slc5a8 LOC107710085 coding downstream 467012 1995442 ~ 2000075 (-)
foxm1 LOC107658881,LOC107710101,LOC107656265 coding downstream 482029 1979107 ~ 1985058 (-)
ppp1r3aa LOC107658872,LOC107584007,LOC107726069 coding upstream 28502 2499774 ~ 2504213 (-)
tfec LOC107584009,LOC107725982,LOC107658865,LOC107710111,LOC107580185,LOC107656331 coding upstream 312189 2783461 ~ 2823147 (-)
lta4h lta4h,LOC107658863,LOC107656327,LOC107744078 coding upstream 364576 2835848 ~ 2845005 (-)
cdk17 cdk17,LOC107658862,LOC107656329 coding upstream 391868 2863140 ~ 2904289 (-)
mcm10 mcm10,LOC107658860,LOC107726070,LOC107743741,LOC107656326 coding upstream 456533 2927805 ~ 2934976 (-)
LOC122343417 NA non-coding downstream 177968 2203585 ~ 2289119 (-)
G25362 NA non-coding downstream 183309 2283285 ~ 2283778 (-)
LOC122343454 NA non-coding downstream 284418 2167305 ~ 2182669 (-)
G25299 LOC108267243 non-coding downstream 303379 2163426 ~ 2163708 (-)
G25298 LOC107549254,LOC107563058 non-coding downstream 303768 2162530 ~ 2163319 (-)
LOC122343423 NA non-coding upstream 62933 2534205 ~ 2538006 (-)
G25625 NA non-coding upstream 508887 2980159 ~ 2996458 (-)
LOC122342459 NA non-coding upstream 645132 3116404 ~ 3117297 (-)
LOC122342458 NA non-coding upstream 646207 3117479 ~ 3119550 (-)
G25673 wnt5b,LOC107656325,LOC103026771,LOC107580320,LOC107744029,LOC107726030 non-coding upstream 909386 3380658 ~ 3676399 (-)
dock4b dock4b,LOC107656358,LOC108425388 other downstream 91371 2299635 ~ 2375716 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other downstream 369286 2091351 ~ 2097801 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other downstream 378508 2042953 ~ 2088579 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other downstream 564424 1898403 ~ 1902663 (-)
ccdc167 ccdc167 other downstream 812261 1653591 ~ 1654826 (-)
LOC122342907 NA other upstream 1012 2472284 ~ 2473068 (-)
ccdc3a ccdc3,ccdc3a,LOC107725961,LOC107658768,LOC107580337,LOC107744050 other upstream 528610 2999882 ~ 3012214 (-)
LOC122342805 NA other upstream 547820 3019092 ~ 3021512 (-)
LOC122342819 foxp2,foxp4,LOC107725896,LOC107728618,LOC107656011,LOC107675840 other upstream 1063390 3534662 ~ 3577123 (-)
LOC122342822 tmem9b,LOC107674442,LOC107750540,LOC107754675,LOC107585953,LOC107700603,LOC107593285 other upstream 1129728 3601000 ~ 3601991 (-)

Expression


Co-expression Network