mapk12b (mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513)


Basic Information

Item Value
gene id mapk12b
gene name mapk12b,LOC107656379,LOC107710136,LOC107579544,LOC108442322,LOC103035956,LOC108279513
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1818023 ~ 1822750 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236242.1
gtttatttttatgtttatttcatcGAGTATCCCGTGCGTAATTGTGGAAACTTTGAACCGCCCCCAAATCTACCGGTGCTCTCCAAGTTGCGCTCCGTTTGCGCTTCTTCTCTGAGAGTTTCTTCAAAATACCCGATAAACAATGAGAACGTAAAAAAGATAGTTCCACTTTTGAAAGACATTACTTTCAACGCTCTCTGAGGATGTCACTCCGAACCAGGGCAGGATTTTATCGCCAGGAAATAAACAGAACCGTTTGGGACGTACCGGAGAGATACAGAGATCTCATTCAGATAGGAACCGGAGCGTACGGGACGGTCTGTTCAGCCATTGACCGTAAAACAGGAGTGCGTGTGGCCATCAAGAAGCTCCACCGGCCGTTCCAGTCCAGACTGTTCGCCAAGCGCGCTTACAGAGAGCTACGACTCCTCAAGCACATGAAACACGAGAATGTTATTGGACTGCTGGATGTCTTTACCTCGGAAATCTTATTGGACAGATTTCAGGATTTTTACCTGGCGATGCCGTTTATGGGCACTGATTTGGGAAAGCTGATGAAGATGGAGAGACTATCGGAGGACAGGGTGCAGTTTCTGGTCTATCAGATACTGAGGGGTCTGAAGTACATTCATTCAGCCGGGATCATTCACAGGGATCTCAAACCAGGAAATCTGGCAGTGAACCAGGACTGTGAGTTGAAGATCTTGGACTTTGGCCTCGCACGTCAGGCAGATTCAGAGATGACAGGTTATGTTGTGACGCGCTGGTACAGAGCACCGGAGGTTATCCTCAACTGGATGCACTACTCTCAAACAGttgATATCTGGTCAGTGGGCTGCATCATGGCGGAGATGTTGCTGGGAAGGCcactttttaaaggaaatgacCATCTGGACCAGCTGAGAGAGATCATGAAAATCACAGGAACACCGGCACCAGATTTCATCATGAAGCTACAAAGCCAAGACGCCAAAAACTACATCCGAGGTCTAGCTAAAGTACCAAAGAAAGACTTAAACACTATTTTCTTTAAAGCCAGCACAGAAGCGGTGAATGCTCTGGAGCGGATGCTGGTTCTGGATCCAGACAAACGCGTGAGTGCTGCAGAGGCGCTTGAGCTCCCGCTCTTCACAGAGTTCAGAGAACCTGAGGAAGAGACGGAGGCCCTGCCTTATGATCACTCTATGGACAACACAGAAATGCCTCTGGACCAGTGGAAACGTCACACTTTTACAGAGATCCTGTCATTCCAGCCAGCCGTTACAGAGATCAGAGACTCCAAAGAAACATCCCTCTGAGTGAACACAgatacacactatatataaaatgcataaatgcatgtgaaaagaagatggaataaatgtaaactatatgACAA

Function

symbol description
mapk12b Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human MAPK12 (mitogen-activated protein kinase 12).

NR:

description
PREDICTED: mitogen-activated protein kinase 12-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004707 MAP kinase activity molecular_function

KEGG:

id description
K04441 P38; p38 MAP kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236242.1 True 1378 mRNA 0.47 12 1818023 1822750

Neighbor

gene id symbol gene type direction distance location
mapk11 mapk11,LOC107725929,LOC107656380,LOC107579565,LOC107583972,LOC108442323,LOC103035641 coding upstream 1545 1809292 ~ 1816478 (+)
LOC122343360 NA coding upstream 9323 1805589 ~ 1808700 (+)
LOC122343361 LOC107725905,LOC107658738,LOC107584038 coding upstream 13457 1800486 ~ 1804566 (+)
si:dkey-14d8.21 LOC107725922,LOC107583962 coding upstream 20131 1792307 ~ 1797892 (+)
strip2 strip2,LOC107725919,LOC107656389,LOC107658739 coding upstream 34340 1762143 ~ 1783683 (+)
LOC122342504 si:dkey-14d8.7,LOC107583991,LOC107658912,LOC107725942,LOC107656269,LOC107710135,LOC107601130,LOC107579872 coding downstream 885 1823635 ~ 1825062 (+)
mrps18a LOC107583989,LOC107710130,LOC107656376,LOC107736677,LOC107581188 coding downstream 73411 1896161 ~ 1898257 (+)
pou3f2a pou3f2a,LOC107726028,LOC107583975,LOC107656268,LOC107579586,LOC107710088,LOC107658894 coding downstream 117992 1940742 ~ 1945597 (+)
ngs LOC107583969,LOC107725974,LOC107658888,LOC107579501,LOC107656267,LOC107710103 coding downstream 138112 1960862 ~ 1965535 (+)
si:ch73-352p4.8 si:ch73-352p4.8,LOC107726064,LOC107710127,LOC107656372,LOC107583968,LOC107658734 coding downstream 150524 1973274 ~ 1979290 (+)
G25030 NA non-coding upstream 28747 1788631 ~ 1789276 (+)
G25071 NA non-coding upstream 124634 1688978 ~ 1693389 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding upstream 260245 1556392 ~ 1557778 (+)
G24925 NA non-coding upstream 530950 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 690643 1112895 ~ 1127380 (+)
G25086 NA non-coding downstream 7928 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 77146 1899896 ~ 1901886 (+)
G25192 NA non-coding downstream 83080 1905830 ~ 1906106 (+)
G25193 NA non-coding downstream 84450 1907200 ~ 1908927 (+)
LOC122342875 NA non-coding downstream 206046 2028796 ~ 2033049 (+)
LOC122342451 NA other upstream 29927 1784237 ~ 1788096 (+)
LOC122343488 NA other upstream 145064 1670512 ~ 1672959 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 486180 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 526799 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 568854 1245578 ~ 1249169 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 171490 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1276987 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1296765 3119515 ~ 3306758 (+)
G25514 NA other downstream 1658879 3481629 ~ 3502094 (+)
G25551 NA other downstream 1914752 3737502 ~ 3738594 (+)

Expression


Co-expression Network