si:ch211-214j24.10 (si:ch211-214j24.10,LOC107725935,LOC107711484,LOC107583983,LOC107656420,LOC107579683,LOC107658903)


Basic Information

Item Value
gene id si:ch211-214j24.10
gene name si:ch211-214j24.10,LOC107725935,LOC107711484,LOC107583983,LOC107656420,LOC107579683,LOC107658903
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1625295 ~ 1628655 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236317.1
GTCATCGCCCCATTTCTCCCTGGTGACTGTCACTTCCGTATGATAGCATTAAGCAACACGCCGCTGCGCGACACACTCACGTAGACACACAAAAGTCCAAACCGCGTTTAAAAACCGGATTTATCATATCGAAATGCATATCAAAACAGGTACCTGGGAGTCAAGCAATGCAGTGTGTGAGTCTGACCCCTTGTGTGATCCAGCCGTCCTAGTGTCACCCCCTAAACCTGAACCACAGATCCGAAACCGTCGCCTTTCCCCCGGCTCTGGCAGCTGCGGTGGGGGAGGAGGGGGCTGTTCCTCTGGGATGGATAAACGTCAAGCCTCACCGAGTAGCCTGGAAGGTTCTCTGAATGGGGTGGGTCACACCCAGACCTTCACATCTAGAGAGCGTCGTGTCCCGAATAAATCAAGAAGCTTTCGGCGTGACGGCCCGAGACCAGGGCCACGTTCGGATGAGAGACACTATCGAACCGGTCAGAAAGAACGATGGGTAGACAACAGCCTGTCTTTACTTAAACCTCCACCTGCTTTCCCAGTGAAGGACAGTCCCGCCAAACTGCAGCCGGCTGTCAGCTATGCCTCCAAGGTGAAGGCAGGGGGAGGATCTGTCGGGGCAGCCGAAGAGCCCCCTGGTATCGGGGTTTTGCTGCAGAACCAGTGGGGACTCAGCTTCATCAGTGACGGCCCGGAAGCAGATGATCCCCAGGAGAAAACCCCGGATCTCCACCCAGTTGCTGGAGAGGTTACTGTAAAGCTGGAGTCTCTGCCTGGTCAGATCACAAGAGGCTCAGAGAGTTCAGAGGAGCTGCTGCTTAGCTGTCGCCACCTGGAGGAAGCGTTGGAGTATCACACACAAGAAtggaaagcaatattatggagaCAAAAACAAGacCCTGCAAAGATTGTTTGGTACAAGAATGCCCTGGAGTCGCCTGCCTAGCACACACTAAcatgtctacacacacacacacacacactcgaaaCAAACACACCCCGCACTCAGGTTCTCATCCCCTCAAAGTTTCCACCGAGACACTTTAGGACTTGTTCCCCTATGAAGATAGATGTCTTGGACTTCTCGGTTGCCTTACAACAGAGTCTGCCTCAGGCGCAGAGTCCCTCTGCTTACCTCTGTCATTTTAATGGTGGAGAATTGtctcttttaagaaaaaaagctgcaattttatttcagtgaactgcagttttacagttaaaaatccCTTTTATTCCTCCCTTGTTCCTACTGTGTGCAAGTGGTTAAATCAAGCACTTTCTGACCTGTAGTTGAACATGTCATCCCTTTCTATAAAGACTGAGCCCGTTTTTAGAACCAAATCCAGAATGTCTTCATCAGTCTTCCCTCTGGTGATAATCCCTTTCTTTCCACACAAATTGTTCTCATGAAGTTTACAGAGGTGCCATTGGCACGTTACGGCAGCACCTTCAAATGTCTATTGGtcttaatgctgttttttaatatatttcaccCAGATTGAATGTCGGTCATAAATCCTAATAGGAATCCGTTGCTGTGTatgacctattttttttttgtttgtttttttttttttttagaaacatacaaataatttaCACTGGAAGATGTTCAGAGATTTAATCGAACAgtgttgaataaaaatgaataaacttgttaaaaata

Function

symbol description
si:ch211-214j24.10 Predicted to enable RNA binding activity. Predicted to be active in cytoplasmic stress granule; nucleoplasm; and polysomal ribosome.

NR:

description
PREDICTED: uncharacterized protein LOC103357125

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236317.1 True 1663 mRNA 0.47 4 1625295 1628655

Neighbor

gene id symbol gene type direction distance location
apex1 apex1,LOC107658891,LOC107725930,LOC107583973,LOC107656416 coding downstream 3414 1618977 ~ 1621881 (-)
LOC122342781 selenoo,LOC107579553,LOC107711487,LOC107725908,LOC105900684 coding downstream 21582 1601675 ~ 1603713 (-)
LOC122342889 NA coding downstream 31926 1591389 ~ 1593369 (-)
LOC122342888 LOC107584032,LOC107579834,LOC107656234,LOC107711464,LOC107725908 coding downstream 33990 1588279 ~ 1591305 (-)
ano2b LOC107658923,LOC107726040,LOC107583957,LOC107579307,LOC107656385,LOC107711491 coding downstream 62748 1530792 ~ 1562547 (-)
si:ch211-214j24.14 LOC107658910,LOC107579438,LOC107725940 coding upstream 26381 1655036 ~ 1658265 (-)
LOC122343486 LOC107583996,LOC107725944,LOC107658917,LOC107579452,LOC107656399,LOC107579492 coding upstream 37990 1666645 ~ 1670146 (-)
LOC122343487 LOC107583996,LOC107658917,LOC107725944,LOC107656399,LOC107579452,LOC107579492 coding upstream 46547 1675202 ~ 1678612 (-)
rad51ap1 LOC107658893,LOC107579575 coding upstream 52294 1680949 ~ 1683573 (-)
fgf23 fgf23,LOC107658906,LOC107583986,LOC107656424,LOC107725936,LOC107710109,LOC107579742 coding upstream 56474 1685129 ~ 1687279 (-)
G25098 NA non-coding downstream 47570 1577201 ~ 1577725 (-)
G25028 NA non-coding downstream 48579 1576061 ~ 1576716 (-)
G25027 NA non-coding downstream 49876 1570293 ~ 1575419 (-)
G25019 tbc1d30,LOC107725910 non-coding downstream 144402 1478609 ~ 1480893 (-)
G25001 LOC107726026,LOC107658929,LOC107656386 non-coding downstream 205033 1418186 ~ 1420262 (-)
G25124 NA non-coding upstream 31950 1660605 ~ 1661388 (-)
G25125 LOC107583967,LOC107658918,LOC107725927,LOC107656410,LOC107711479 non-coding upstream 33690 1662345 ~ 1662607 (-)
G25126 cecr1b,LOC107656410,LOC107711479,LOC107583967,LOC107725927,LOC107581132 non-coding upstream 34418 1663073 ~ 1663900 (-)
G25127 NA non-coding upstream 37183 1665838 ~ 1666137 (-)
G25133 NA non-coding upstream 59703 1688358 ~ 1688894 (-)
zgc:113263 LOC107658878,LOC107583959,LOC107725918,LOC107656382,LOC107711463 other downstream 6997 1609360 ~ 1618298 (-)
selenoo2 selenoo,si:dkey-14d8.2,LOC107579362,LOC107711485 other downstream 20605 1594284 ~ 1604690 (-)
LOC122342802 LOC107711465,LOC107656235 other downstream 39106 1580480 ~ 1586189 (-)
ptprz1b ptprz1,ptprz1b,LOC107725913,LOC107656236,LOC107658935,LOC107581028 other downstream 301898 1289314 ~ 1323397 (-)
G24875 NA other downstream 555199 1069160 ~ 1070096 (-)
ccdc167 ccdc167 other upstream 24936 1653591 ~ 1654826 (-)
rsph9 rsph9,LOC107658900,LOC107583979,LOC107579672,LOC107710090,LOC107656226 other upstream 269748 1898403 ~ 1902663 (-)
cald1a cald1a,LOC107583995,LOC107725991,LOC107658884,LOC107656362,LOC107710121 other upstream 414298 2042953 ~ 2088579 (-)
tnni4a zgc:101560,LOC107725970,LOC107584059,LOC107658770,LOC107656258,LOC107581287 other upstream 462696 2091351 ~ 2097801 (-)
dock4b dock4b,LOC107656358,LOC108425388 other upstream 670980 2299635 ~ 2375716 (-)

Expression


Co-expression Network