itih2 (itih2,LOC107555817,LOC107666937,LOC107748478)


Basic Information

Item Value
gene id itih2
gene name itih2,LOC107555817,LOC107666937,LOC107748478
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13152421 ~ 13164123 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236341.1
AGGCTGAACATTTAGCCTCagttacagtgtgtgtgtgtgtggaccgTGCTGTCCTTTTTGTGCTTTCTTGAgtggatgctttttttttcgGGTTCCATGAAGACTCCGGTTCTCCTGTGCGTCCTGCTCTTTTCTCAGAGCTGGGCTTTCGAGTTCATCGTCGATGGGGAGTGGGAAAGCGAAACATCAGGTCCTTTGGATCAGTACCACCAATCTGGGAGATACAGGAGGGACGTTTTGACCAGTGGAGAAGACGATTTTGAGGCGATTCAGGGCAATGACGTTACAGTTAAGAGCTATAAGGTGGAGAGCAGGATCACGTCGCGGTTCGCTCACACCACCGTCAAGAGCTCTGTGGTCAACTCGGGCCCGGACGCCCAGAGCATCGGCTTCAACGTGCAGATCCCCAAACGAGCCTTCATCAACAACTTCACCATGAATGTCAATGGGATCACGTTCGTCGGCTCGGTGAAGGAGAAGACTGTGGCACGAAACCTTTACGCTCAGGCAAGGGCTCGTGGGAAAGCGGCCGGCATTGTCAGGGCTAACTCTCAAGCAATGGAGACGTTTAGGACGGAGGTGCACGTTCCCCCGGGCAGCAAAGTGGAGTTTGAGCTGCACTATCAGGAAATGATGCAGAGGAAGCTGGGCGTCTACCAGCACACCCTACACCTGCAACCCGGACGCCTGGTCCCGCTGATGCAGGTGGACGTGTATATCTTCGAGCCCAAAGGCATCAGGTTCGTCACGTCCACGAACACGATGGGAGAGCAGTTTGCGGATTCGACCAAAATCAGCCACACGAAAGACAAAGCCCACGTTGCGTTCAAACCGACTCTGCAGCAGCAGCGCAAGTGTGAGAACTGCACGGAAAGCGCGGTGGATGGTGTGTTTGTCGTGCAGTATGACGTGGAGAGGGAGAGCAATGCTGGAGAGCTTCAGGTGTCTGACGGTCATTTCGTTCAGTTCTTTGCTCCGTCtgatctctctcctctctccaaAAACATCGTTTTCGTCATCGATGTGAGCGGAAGCATGTGGGGGCTGAAAATGAAACAGATGGTGGAAGCGATGAAGGCTATTCTGGACGATCTGTCGATGGACGACTATTTCAGCATCATAGATTTCAATCACAACGTCCGTTGCTGGAGCGAAGATCTGGTCCAGGCTTCCTCCATCCAGGTGGATGAAGCTAAAAAGTATGTCCAAAGCATCAAGCCCAGCGGAGGCACCAACATCAACGAGGCTTTACTGAAAGCAGTGCAGATGCTGGTAAGAGCATCCAATCAGGGACTGATCGACCCTCGTTCTGTGTCTATGATCATTCTGGTGTCTGATGGAGACCCGACCGTGGGAGAAATAAAGCTGAGCACCATTCAGAAGAACGTGAAGCGCGTGATGAGGGAGGAGTTTTCGCTGTTCTCTCTCGGCATTGGCTTTGACGTCGACTTTGACTTCCTGGAGCGAATCGCCATGGACAACAGGGGCGTCGCCCAGAGGATTTTTGCCAATCACGATGCAGCAGAACAGTTAAAGACGTTCTACAGTCAGGTCTCCTCTCCCCTCCTGAGGTCCATCACCATTCATTTTCCCGAGAACACCGCGAACAATGTGACTCAGAATCGCTTCGACAAGTTCTTCAGCGGCTCCGAGCTGATAGTGGCTGGAAAACTGCAACCGTCAGACCTCACGACGCTGCAAAGCTTCACCACAGCCTCCGCTGCCAACATGGACCTGAACATTCAGACGGAGGCAGATATCGGGGAGTTGGATTCTGTGCTCGGCACGCATTCACATTCGTTCACCGGCTTCGCTCGGCAGATGTGGGCTTACATAACTGTCAATCAGCTAATGGCCGAACGCTCCCTAGCTCCTACCGCAAGTAAGAAGCGTAGGATCACCCAGAGGATCGTGGCGCTGGCTGTGGAGCATCAGTTCGTGACCCCCCTCACCGCCATGCTGGTGGAGGGCGAGGACCAGGGCAGGCCAGAACGACTGATCGCAGACTCGCCTAAAGACTCGAAACACGGCTGCTGCTCAGCCACTGCTCCCTTAAGTGGACGGCCGCCGGTACAACAGATGGTCTATTCCAATCCTCCGTGGGTCCTGCCTACAGCTGCTCCAACTCCTGGACAAGTAGTTAGACCTATTCCTGACCACATCATTTCTGTGGACAACGATCCCCACTTCATCGTCCATTTACCCAAAAACAACATGGACGTCTGCTTCAACATCGACTCCAAGCCTGGACACATCCTGAACCTGATTTCAGATCCCGGAACAGGAGTCACAATCAACGGTCAGTTGGTCGGGTCTAAGAAGATGAAgaacaataaattaaacacGTATTTCGGCACCATCTCCATATACTCTAAAAAAGACGGGGCGCAGGTTATAGTAGGAACCGACAGAATCGAACTGAGGGAAGGAAGGAACAGTCACTCCTTCTCTTGGGGAGCCACGGCTGAGCTGGTGCTTAACAGGATGAAGATCACTATAGTGAAAGAGCAACATGTTACCGTAACAATCAACGGGAGGATTTCAGCGATGGTGCTTTTGCATCGGGTTTGGAAGAAGCATCCCGTGCAGGTGGACTTCCTGGGCATCTACATGTCTAACGACAACAAATACTCCGCGCAGGTTCACGGCCTCATCGGTCAGTTTGCGCGAGAACCAAACGTAAAGGTGTACGACGTGCACGATGGAGCAGATCCGAAGAAGAAAGAGGCCACAATGGAGGTGAAAGGCAACAAATTAGCCGTCACCAGGGGGTGGCAGAAGGACTACAGACGTGACAAGAAACGAGGTTCAGACGTCTACTGCTGGTTTATCCATAACAGTGGGAAAGGCCTCATTGATGGCAGTTACACCAGCTACATCCTGCCTCGGCTGGACAGCTTCCTGACCTCCGTCTGAGATAACGAGCGCGCGGCGGCTAGGTTAGGATACTCGCTAAAAGATCAGCGGGAATCCGTTATTTTATACAAGGAATTAGAATTGAAGAAAAACGAAACATgccagctttaaaaaaaaaaaaaaggtttttaatacaacaagaaaatatatacaaaacataGGAAAACTGGAATCACAATCAAAAATCTAATTGATGTATAAGACTTTTGACTTTCTGAGCGTTTGCCGTGCAACGTTTAATTGAGAGTTTGCTTGATTAAATCAGACCCCTCCCCCAACGGCGCAATAAAAACCCATTGGTCAATTTC
>XM_043236342.1
AGGCTGAACATTTAGCCTCagttacagtgtgtgtgtgtgtggaccgTGCTGTCCTTTTTGTGCTTTCTTGAgtggatgctttttttttcgGGTTCCATGAAGACTCCGGTTCTCCTGTGCGTCCTGCTCTTTTCTCAGAGCTGGGCTTTCGAGTTCATCGTCGATGGGGAGTGGGAAAGCGAAACATCAGGTCCTTTGGATCAGTACCACCAATCTGGGAGATACAGGAGGGACGTTTTGACCAGTGGAGAAGACGATTTTGAGGCGATTCAGGGCAATGACGTTACAGTTAAGAGCTATAAGGTGGAGAGCAGGATCACGTCGCGGTTCGCTCACACCACCGTCAAGAGCTCTGTGGTCAACTCGGGCCCGGACGCCCAGAGCATCGGCTTCAACGTGCAGATCCCCAAACGAGCCTTCATCAACAACTTCACCATGAATGTCAATGGGATCACGTTCGTCGGCTCGGTGAAGGAGAAGACTGTGGCACGAAACCTTTACGCTCAGGCAAGGGCTCGTGGGAAAGCGGCCGGCATTGTCAGGGCTAACTCTCAAGCAATGGAGACGTTTAGGACGGAGGTGCACGTTCCCCCGGGCAGCAAAGTGGAGTTTGAGCTGCACTATCAGGAAATGATGCAGAGGAAGCTGGGCGTCTACCAGCACACCCTACACCTGCAACCCGGACGCCTGGTCCCGCTGATGCAGGTGGACGTGTATATCTTCGAGCCCAAAGGCATCAGGTTCGTCACGTCCACGAACACGATGGGAGAGCAGTTTGCGGATTCGACCAAAATCAGCCACACGAAAGACAAAGCCCACGTTGCGTTCAAACCGACTCTGCAGCAGCAGCGCAAGTGTGAGAACTGCACGGAAAGCGCGGTGGATGGTGTGTTTGTCGTGCAGTATGACGTGGAGAGGGAGAGCAATGCTGGAGAGCTTCAGGTGTCTGACGGTCATTTCGTTCAGTTCTTTGCTCCGTCtgatctctctcctctctccaaAAACATCGTTTTCGTCATCGATGTGAGCGGAAGCATGTGGGGGCTGAAAATGAAACAGATGGTGGAAGCGATGAAGGCTATTCTGGACGATCTGTCGATGGACGACTATTTCAGCATCATAGATTTCAATCACAACGTCCGTTGCTGGAGCGAAGATCTGGTCCAGGCTTCCTCCATCCAGGTGGATGAAGCTAAAAAGTATGTCCAAAGCATCAAGCCCAGCGGAGGCACCAACATCAACGAGGCTTTACTGAAAGCAGTGCAGATGCTGGTAAGAGCATCCAATCAGGGACTGATCGACCCTCGTTCTGTGTCTATGATCATTCTGGTGTCTGATGGAGACCCGACCGTGGGAGAAATAAAGCTGAGCACCATTCAGAAGAACGTGAAGCGCGTGATGAGGGAGGAGTTTTCGCTGTTCTCTCTCGGCATTGGCTTTGACGTCGACTTTGACTTCCTGGAGCGAATCGCCATGGACAACAGGGGCGTCGCCCAGAGGATTTTTGCCAATCACGATGCAGCAGAACAGTTAAAGACGTTCTACAGTCAGGTCTCCTCTCCCCTCCTGAGGTCCATCACCATTCATTTTCCCGAGAACACCGCGAACAATGTGACTCAGAATCGCTTCGACAAGTTCTTCAGCGGCTCCGAGCTGATAGTGGCTGGAAAACTGCAACCGTCAGACCTCACGACGCTGCAAAGCTTCACCACAGCCTCCGCTGCCAACATGGACCTGAACATTCAGACGGAGGCAGATATCGGGGAGTTGGATTCTGTGCTCGGCACGCATTCACATTCGTTCACCGGCTTCGCTCGGCAGATGTGGGCTTACATAACTGTCAATCAGCTAATGGCCGAACGCTCCCTAGCTCCTACCGCAAGTAAGAAGCGTAGGATCACCCAGAGGATCGTGGCGCTGGCTGTGGAGCATCAGTTCGTGACCCCCCTCACCGCCATGCTGGTGGAGGGCGAGGACCAGGGCAGGCCAGAACGACTGATCGCAGACTCGCCTAAAGACTCGAAACACGGCTGCTGCTCAGCCACTGCTCCCTTAAGTGGACGGCCGCCGGTACAACAGATGGTCTATTCCAATCCTCCGTGGGTCCTGCCTACAGCTGCTCCAACTCCTGGACAAGTAGTTAGACCTATTCCTGACCACATCATTTCTGTGGACAACGATCCCCACTTCATCGTCCATTTACCCAAAAACAACATGGACGTCTGCTTCAACATCGACTCCAAGCCTGGACACATCCTGAACCTGATTTCAGATCCCGGAACAGGAGTCACAATCAACGGTCAGTTGGTCGGGTCTAAGAAGATGAAgaacaataaattaaacacGTATTTCGGCACCATCTCCATATACTCTAAAAAAGACGGGGCGCAGGTTATAGTAGGAACCGACAGAATCGAACTGAGGGAAGGAAGGAACAGTCACTCCTTCTCTTGGGGAGCCACGGCTGAGCTGGTGCTTAACAGGATGAAGATCACTATAGTGAAAGAGCAACATGTTACCGTAACAATCAACGGGAGGATTTCAGCGATGGTGCTTTTGCATCGGGTTTGGAAGAAGCATCCCGTGCAGGTGGACTTCCTGGGCATCTACATGTCTAACGACAACAAATACTCCGCGCAGGTTCACGGCCTCATCGGTCAGTTTGCGCGAGAACCAAACGTAAAGGTGTACGACGTGCACGATGGAGCAGATCCGAAGAAGAAAGAGGCCACAATGGAGGTGAAAGGCAACAAATTAGCCGTCACCAGGGGGTGGCAGAAGGACTACAGACGTGACAAGAAACGAGGTTCAGACGTCTACTGCTGGTTTATCCATAACAGTGGGAAAGGCCTCATTGATGGCAGTTACACCAGCTACATCCTGCCTCGGCTGGACAGCTTCCTGACCTCCGTCTGAGATAACGAGCGCGCGGCGGCTAGgacacAAACGCACCTCTGGCTCCTTGCCCTCTCTGCCACGGCGGACCTGATCTTCGATGAATTTGGCGCTGCGTTCTTCATCATCCAGATCCtgtttcttcttcctctcttgCTCTTCCTGCTTGCGGATCGTCTCC

Function

symbol description
itih2 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to act upstream of or within hyaluronan metabolic process and negative regulation of peptidase activity. Predicted to be located in extracellular region. Is expressed in ball; extension; liver; and yolk syncytial layer. Orthologous to human ITIH2 (inter-alpha-trypsin inhibitor heavy chain 2).

NR:

description
PREDICTED: inter-alpha-trypsin inhibitor heavy chain H2

GO: NA

KEGG:

id description
K19015 ITIH2, SHAP; inter-alpha-trypsin inhibitor heavy chain H2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236341.1 True 3224 mRNA 0.51 20 13154146 13164123
XM_043236342.1 False 3076 mRNA 0.53 21 13152421 13164123

Neighbor

gene id symbol gene type direction distance location
atp5f1c atp5c1,LOC107728502,LOC107748457,LOC107555824 coding downstream 1715 13146654 ~ 13150706 (-)
taf3 taf3,LOC107555823,LOC107675973,LOC107578374 coding downstream 7513 13102315 ~ 13144908 (-)
gata3 gata3,LOC107555822,LOC107748455,LOC107675980 coding downstream 61586 13075216 ~ 13090835 (-)
celf2 celf2,LOC106927059,LOC108233267,LOC101484207,LOC107092344 coding downstream 480950 12539057 ~ 12671471 (-)
usp6nl usp6nl,LOC107669711,LOC107710686,LOC107572286 coding downstream 616095 12492354 ~ 12536326 (-)
pfkfb3 pfkfb3,LOC107555830,LOC107748462,LOC107663448 coding upstream 103952 13268075 ~ 13275474 (-)
rbm17 rbm17,LOC107755150,LOC107748463,LOC107663450 coding upstream 117060 13281183 ~ 13301329 (-)
ndufa12 ndufa12,LOC107667714,LOC107755161 coding upstream 209508 13373631 ~ 13375343 (-)
nr2c1 nr2c1,LOC107689225,LOC107755159 coding upstream 212051 13376174 ~ 13384446 (-)
fgd6 fgd6,LOC107755156,LOC107689226,LOC107667720,LOC107748482,LOC107567667,LOC107597032 coding upstream 220465 13384588 ~ 13403216 (-)
LOC122342546 NA non-coding downstream 80901 12988707 ~ 13071520 (-)
G28130 NA non-coding downstream 883681 12265665 ~ 12268740 (-)
LOC122342788 NA non-coding downstream 914284 12236645 ~ 12238137 (-)
G28117 NA non-coding downstream 997170 12148132 ~ 12155251 (-)
G28086 NA non-coding downstream 1133420 12018609 ~ 12019001 (-)
G28349 NA non-coding upstream 63577 13227700 ~ 13227947 (-)
G28350 NA non-coding upstream 64971 13229094 ~ 13229319 (-)
G28353 NA non-coding upstream 78383 13242506 ~ 13245388 (-)
G28359 NA non-coding upstream 86528 13250651 ~ 13252034 (-)
G28377 NA non-coding upstream 147750 13311873 ~ 13319748 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other downstream 663240 12465612 ~ 12489181 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other downstream 1136654 12014631 ~ 12015767 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other downstream 1155782 11841965 ~ 11996639 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other downstream 1468559 11653470 ~ 11683862 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other downstream 1578655 11414720 ~ 11573766 (-)
tmem110l tmem110l,LOC107597025,LOC107748459,LOC107675974,LOC107555827,LOC107666935 other upstream 12838 13176961 ~ 13186890 (-)
tmcc3 tmcc3,LOC107689246,LOC107667715 other upstream 152809 13316932 ~ 13361938 (-)
G28397 vezt,metap2,metap2a,LOC107755144,LOC107689227,LOC107597031,LOC107667718,LOC107755160,LOC107689230,LOC107597011 other upstream 247501 13411624 ~ 13432703 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other upstream 528348 13692471 ~ 13698715 (-)
LOC122343280 NA other upstream 651451 13815574 ~ 13831851 (-)

Expression


Co-expression Network