ankrd16 (ankrd16,LOC107754065,LOC107594131,LOC107694253,LOC107560709)


Basic Information

Item Value
gene id ankrd16
gene name ankrd16,LOC107754065,LOC107594131,LOC107694253,LOC107560709
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 5398333 ~ 5400913 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236454.1
TCGTCGACCCATCATGTCCGACCATGCAGTAAAAACATTGGTGGTTTCTGTTGATATTTCAGTAGTAATGCATCGCTGTTGcgatttcttttcctttcagcAGTCTATTTAGAAGCATTTAACTGGGCGAAATGGAGGAAGACGGCACATTAAAGCACTTAATCAAAGCAGTTCAACATGGAGAGCTGTGCACAGTCAGACAGCTACTTAACGAGCACGACAACAAGCAGGCTGTCATCTACACTCATTTTGGGAGATCTGGAGATACTGTCCTGCACTACGCTACCAGACATGGACACATAGACATTTTGCGTTATTTAGTAGAGGAGCTCAAAATGGACACTGAGGTGTATAACAACGACTACAAGAGAGCGCTGCACGAGGCTTCTTCCATGAGTCATTATGAGTGCGTGCGGTACCTCATTGCCAGAGGAGCGAAAATAGACAGTTTGAAGAAAGCAGACTGGACCCCTCTTATGATGGCCTGTACCCATCGAAACCTCCAAGTCGTTTTGGAGCTGCTGAATCACGGTGCTGACCCAGTGCTGCAGAACAAGGATGGATGGAACTCATTCCACATTGCATGCAGAGAAGGAGATCCAGCCATCGTACACCACCTCCTACTGGCCAAACCCCAAGTCTGGAAGACAAAGAGCAAGACTGGAAGAACACCCCTCCACACTGCTGCTATGCACGGCTGTGAGGATGCAGTGAAGATTTTGCTTCAGAGTTGTAGCTATGAGCCTGATGGGAAGGATAGTTGTGGAGTTACTCCCTTTATGGATGCGATAAGGAATGGACACATAGCTATTGCTAAACTGCTTCTTGATAATCAACGGGCATCTCCCTCCGCTGTAGATATTCTCGGAGCGCAGCCTTTACACCAGGCCTCTGTAACTGCTCAGGAAGAAGCGCTTTCTTTCCTCGTGCATAATCTTGGTATTGATGTAAATTCAAGAGCCACAAAACTGGAGCTGACTGCACTGCACTACGCTGCTAAGGAAGGTCACAcaagcacaataaaaacactgctcGCCCTGGGCGCTGATCTACATGCAAGAGACACAAAAGGAAGATCAGCTCTACATATGGCGTGCATAGGGCAACATGTGGACACCGTCAGGATGCTGCTGCAACTGGGACTCGCGGATACTGACGACAATACTGGCAATATGGCAAGACAGTATGCCAAAAAACCTCAGATTATAGAAGTGTTTGAAAGGCTTGAAATGTAATATCTGTGTCGGATGGATAAAACATTGCTTTGAATGAGTATTAAGTAAAAGTGGACaaagttacaaaataaatgctttttatgaaa

Function

symbol description
ankrd16 Orthologous to human ANKRD16 (ankyrin repeat domain 16).

NR:

description
PREDICTED: ankyrin repeat domain-containing protein 16 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236454.1 True 1321 mRNA 0.46 7 5398333 5400913

Neighbor

gene id symbol gene type direction distance location
sema3aa sema3aa,LOC107562295,LOC107694310,LOC107757236,LOC107655621,LOC107560735 coding upstream 53461 5256404 ~ 5344872 (+)
tspan11 tspan11,LOC108279944,LOC107720401,LOC107593980,LOC107560736,LOC107694254 coding upstream 144317 5239403 ~ 5254016 (+)
cracr2ab cracr2ab,LOC107690648,LOC107742178,LOC107560738 coding upstream 173389 5216459 ~ 5224944 (+)
ccdc59 LOC107548114,LOC107739147,LOC107656276,LOC107745010 coding upstream 225923 5170750 ~ 5172410 (+)
syt10 syt10,LOC107744086,LOC107658793,LOC107656242,LOC107745011,LOC107565666,LOC107592193 coding upstream 329468 5053790 ~ 5068865 (+)
gdi2 gdi2,LOC107754057,LOC107560733,LOC107757239,LOC107585127,LOC107694307 coding downstream 551 5401464 ~ 5410042 (+)
asb13a.1 asb13a.1,LOC107754064,LOC107560716,LOC107655563,LOC107694252,LOC108436003 coding downstream 9283 5410196 ~ 5412564 (+)
asb13a.2 asb13a.2,LOC107560715,LOC107754063,LOC107655562,LOC103022068,LOC108436004,LOC108280001 coding downstream 11734 5412647 ~ 5417987 (+)
mkln1 mkln1,LOC107754054,LOC107655615,LOC107757245,LOC107560731,LOC107587826,LOC107694304 coding downstream 120840 5521753 ~ 5540119 (+)
cry1a cry1aa,LOC107560722,LOC107593424,LOC107655612,LOC107694298,LOC107757210 coding downstream 303568 5704481 ~ 5715620 (+)
G26196 NA non-coding upstream 193028 5204113 ~ 5205305 (+)
G26156 LOC107715531,LOC107690654,LOC107715130,LOC107574393,LOC564807,LOC564948,LOC107690650 non-coding upstream 275579 5122473 ~ 5122754 (+)
G26155 LOC107571045,LOC107575733,LOC107575819,LOC107690650,LOC107574392,LOC107656209,LOC107574393,LOC107743912,LOC107724548,LOC107577060 non-coding upstream 280091 5117982 ~ 5118242 (+)
G26148 NA non-coding upstream 286704 5111364 ~ 5111629 (+)
G26145 LOC107690655,LOC107573509,LOC107758319,LOC107574392,LOC107589730,LOC107575819,LOC107658713 non-coding upstream 293992 5104031 ~ 5104341 (+)
G26314 NA non-coding downstream 104159 5505072 ~ 5505372 (+)
G26318 NA non-coding downstream 108390 5509303 ~ 5509795 (+)
G26324 NA non-coding downstream 112643 5513556 ~ 5513972 (+)
G26325 NA non-coding downstream 113439 5514352 ~ 5514581 (+)
G26333 NA non-coding downstream 118020 5518933 ~ 5519157 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other upstream 447 5354332 ~ 5397886 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other upstream 453453 4929471 ~ 4944880 (+)
G25958 NA other upstream 769434 4550163 ~ 4628899 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 1163089 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 1167241 4229629 ~ 4231092 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 381031 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 461694 5862607 ~ 5898827 (+)
vhll NA other downstream 987630 6388543 ~ 6390927 (+)
G26692 NA other downstream 1787027 7187940 ~ 7227437 (+)
akr1b1.1 akr1b1,LOC107725653,LOC107676909,LOC107587163,LOC107591878 other downstream 2013023 7413936 ~ 7463373 (+)

Expression


Co-expression Network