LOC122342594 (LOC107709965,LOC107554744,LOC107700908,LOC107675140,LOC107569318,LOC107757199)


Basic Information

Item Value
gene id LOC122342594
gene name LOC107709965,LOC107554744,LOC107700908,LOC107675140,LOC107569318,LOC107757199
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16398632 ~ 16427186 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236530.1
TGCTTTTATAGTAGAAAGTTTTGACAAAACTGGAACTAATTCGGAAATTTCAATGGATGTTCTTGGAGAAAATGAGGCACTGCAGCAGTTTTTTAATGGTGGCTTGTAATCTATACAGTATGAAGGTACAGTTTACCATCAATAGTTCAAGGCCACGGATCTATAAAACGGGACAGGATGTGAGTGGTGTGTTAGAGAGTGCTGTGGTAGACACCAGTATTCTGGAGCAGTATTTGAGCAATGAGACAGATCCCACTTTTATGTTACCCGACTCGCCACCAGATTCAGGATCAGAGCGCAGTTCTCCACCACAAATACCAGATTCAAGAAGGTCACCGGAGCAAAGCAGCAAGAATGTGTATAGACTATCAGAAGAGTCCTTCCCTCTGTCTTGTCCCTTTAAAGACAGGAAACATGATGTTGGCATACCCCTTGGGAAACAAATTAAAGACATTTCACCTGCTTCACTCCCTCAGTACAGTCTCAACACAGCTGAGAGTTACACACAGGCAACCACATCCCATAATGCACCCATCCATGCTGTCCCACTATATGCTCAGTGCCCACCAATGGGTCTTCCGACAGGACACATGCCAGCTAATGCAGCTGCTGCCTCCTCATGTGTGCCCCACGCAATGTGCTCAGAGACAATGTATCCTCATATGCCCCCAAAACATGATCAACGTGTAGGAAATATCTTACATGAGAATAAGAAAAGAAGAAGGTCAAACTCTTTTGAGGGGCACACAGAGCGGCACAGGTGTGCTGACCCAGTTTGGACCAAACCAACATTCTGTCCAGAAGGTGGATCATATGAAGCACAGTGTTATGACAGTGACACAGCTGGTGTAAGTCCAGTGGGCAGTGTGCACCAGCTGCTCACTTGGGACCAGTATCAGCCCAGTCATTGGTGCTCACTCCACAACAGTAGATCTGAAAGCCTaCCACCTCCAGGTTACCATGTGGATGCTGATAAGGGTTTCAGCTACTCCACAGCTGATGAAGCCTTTGTGTGTCAGAAGAAAAACCACTTCCAGGTGACAGTTCACATAGGGATGGTTGGAGATCCTAGATTTGTCAGAACGTCAAGAGGTCTCATACCCATAGAGTGCTTCCACCTGAATGTGTTTGGGGTCAAGCTTGAAGCACAGGACCATTTCATCACTATAGAGCAGTCGCAGTCAGACCGCAGCAAGAAGCCATTCTTACCAGTCAGAGTAAATCTGCCAGGAGACAAAATCACAAAGGTGACATTAGGAAGGTTACACTTCAGTGAAACCACagcaaataacatgagaaaaaaggGCAAGCCGAATCCTGACCAGAGGTACTTTAAGATGGTTGTTGGTCTGTATGCGACTGTGAAAGAGGAACGTTTTCTGCTGGTTGctaatgtttctgaaagaatcATTGTTAGGGCCTCCAACCCTGGTCAGTTTGAGAATGATAGTGACGTGCTCTGGCAAAAAGGACAGATCCCAGAGACCGTTGTGTGTCACGGGAGGGTTGGCATTAACACAGACAGCCCTGATGAGGCTTTGGTGGTTTGTGGGAATGCCAAGATAATGGGCAATGTCATGCATCCCTCAGACAGAAGGGCCAAACAAAACATTCAGGAAGTGGACTCAACGGAGCAGCTCAAGAGGATTGCTCAGATGAGAATAGTGGAATACGATTACAAACCAGAGTTTGCCTCAAGGATGGGAATTGATCAGTGTCATGAAACGGGAATCATAGCGCAGGAAGTCAAAGAACTCCTGCCTTCGGCCGTGAGGGAGATGGGTGACATCACGTGCATAAACGGGGAGACGATTGATCATTTTCTCATGGTGGACAAAGAGCAGATTTTTATGGAGAATGTAGGTGCTGTGAAGCAGCTGTGTAAACTCACAGATAACCTTGAGACACGTATTCAAGAGCTTGAGGTTTGGAACACTCGCTTGGCCAAGCTGAAGAGGTTGGGTAGCATGCAGTCCAATGGTGGAACTTCTGCTAAAGGGAAAATCCACAAAAACCACACACTCCATTCAAAACTTCCTCCGCCAACACCACCGCAGTCAAGCACAAACTACTTCTGTGGGAGATATCACAACTGTCTTCAACACAGAGTATTCCAAGCTAGTATTATCATGCTAGTAACAACCATGGCTCTTTGcgtCATCTCTATTACTGCACTTTATATGTTGACATTACAAGAAGACATGGACTTCAATAACAGTTTCAACAACAGCAATGTTATGCCAACTTACAGCACGACAGCATCGTCGACTACAGTGTTCTCCACGACCTCTCCTCGTCCCTGGCCTCCAGACATCGATGTCTccaatgtgttttattcagatGAAGTCTACTGCTGTccttcaaatttaatttataatcatAACGCTCAACTGACGGACACAACTGTCCCCTTCGATGCTCTTTCGCATGGAGTCATCAATTCAAGGAAAATGCAGAGAGAGAAGTGGTTAGAAAAACTTCCGGACAAAGTGAAAAATTCTACTGACTGGACAAACACAACTATACATTCCATCCTCGTTACGCAGAATCAACAAATTATAGATAAGCAGTACTGTCAGCAGGAGAATTGTGGGAAAGGAAACTACACCTACCTCATTCCCCTCAGTAAACACATCCCACCCAACATGCCCATAACCCTCCAAATGACCACAACTGAGTTGTTGGTGATTCACCTGTGCTCACATGACGAGAGTGAGCAGTGCTCCTCAGTACTTGACTACGATGGCTCAGAGTCAAACATTGCTCTCAACACACAGGGCTACATACATAAATGGACACTGCCAGTGGCAAATCACTACCACGCATCATACCATTTCCGCTCTTCTGTTGCTGGTTTGGCAGATTGTAACACTGATCTGAACTTTGCAGAAGTTTACTTTACTGACTACCACTTCCAGTTCTTCCGTCGCTGTGACTGATCAACCTTCAAAAAGCAATATCCAGTGATTTGACTGCACTAGTTAAATGCAGGCTGTAAATTATATACCGTAAAGAGTCTTTTTATGGGCAGATGTTTGTGTTgttgctggaaaaaaaactttggaaatatgtttgatattagtttattcttattttcatgttttgaaatCAGAAGGAAACATATGAACTCCAAAGAAAAGTAAAGCAGGTCTTCAAATAtgattttacatgtatatgtttcAACAATGAAGAGATGATTTTGTACTGAACTACATAATGAGATAATCTGATACTCATACTGAATTCATATCTCTACTGAACTGAATGCATTATGTAACCTGTGTGCAATGATGTTGACCAAATGAACATATGATTGTTTCAGAAGTCCAATTGTTTTAACAAGTTATTGaagttttttctaaatattgaACACTGCAAATAAAGGAagatttattctttaaaagtg
>XM_043236532.1
GGgttagctcacccaaaaatgttaataatttctCACCCTCCTGTCATTCCAAATTTATATGACTTAATATGATGATATCATAAGTGAAACCTGGGAGGTTTCTGCTCCAGCTTTGAAGGTCTAAGTACCCAAAACGTATGTGCAAGAAATTCCAAAGCTTAGTTTAATCAAAGCTTAGAAAAAGCATTCAGCCTTATGAACGCTAAAAATACTAAAGACTTACCAGACTTTAAAGATCTCAAGCATTTAAATAGACAACAGAACATGACTTTTGGTGTGTGTTCCGgtatagttacattttaagttattgGCCTTAgacctttaatatttaaacatcatgGTTAAGTAAAGAATGCAATGTTCATCACTGCAAGTTTTTATGCAATGagatcaaaatataaaaatataattctaatCAACACTTCACGATTGATTGATTTTGGCAGCTTTAAtagtaaaaacatgtttatcatatataaaggttttcagaagaattgcacatttatttatttaatatccatACATGTTGGTCAAtcttaatcaatttttttaagaaaatcaaAATGGCAGGCCAGACGTTTCCCTGTTTATAGTTCATTAGTATCAATggttaattaataattagtatcAATGTTATAGGCATGATCCGAGGATTCTTTTAAAAGTCAATATAACATGTAGAAATTGACTGAACcatgtaataatatatcataatttttttaccaCAAGTTGGCACTGCcccaaatgtttttgagcatctTTAGAACATGTTTCGATAACTATGCAATGTGTTtgttaaatacacattttactccaaaattaaaaatgtccgACACTAATCATTTTGACTTCATGTCACGCATTAAATCTTGtagttacacatttatttaacactttacatgtacttactatttaagtttgcataattgcatgcaagtatCCCTGATCCTAAACCTAACTGTATAGTAAGTACATAATtagtagttaattaatattactctgtACTTGTAAAagtgtaattacactgtaacaagcaCACCTGAAAATAAAGTGTAGCTATAAATTTAGTTCACTCGGCAGCCATGCTTTTAATGTGCCCGAATGGTGCTTGCTTAAATGTAAGTACTTCTCTGAAACATctataaatatcaaaaatacttttataacaCTTAAAATCACAacatcattgtaatattttctcttttttttattaatttatgggCAAGCGaaatctgctgtttttttaattaccaaaCAACTACACGAATGATAAACTACAGTAAAATGCCTCCCGGTTACAAAATAACAAACTCTATAACAACTAAACAGCTGAACTATGTGACTATGTGGCTTCTGTCTTAAATTTGGTGCAAccactatattttatttgtgaccTAACTGTATTGTTAATGCTGCTGTGGTAAATTTTTGCTCTGGTATTTGTTCCGGTCAAACGCACAAGGTGTCCAGGATGTCAATGATCTATTTGCACGTAAACACACCCATCAATCCCTTCAGCCTTCGAAGCATGTCTCTGCGCGATTACCTCATAAAGCAAAGCTTCCTTTATGGCCTCCTGCAGGTGTTTGCTTGGCGGCGGGTGGATTTTGCCTCTAGGGTCAGTGAACAAAGTACACACGAGTCCGCACGACGACTGCCATTTTCATTGAATAAGAACCTCTTTTTTCGGATTCTgtatacatttctaattatttcaTTGTAAGAATACATCTACCGACGGTGTATGTGAAGTTACTGATGGATTATACTTGAGCTGTTTACTTGGATGGGTCGAATCCAACAGAAAAGAAGTCTGCATTTTGGGCGGAAAGTGCTTTTATAGTAGAAAGTTTTGACAAAACTGGAACTAATTCGGAAATTTCAATGGATGTTCTTGGAGAAAATGAGGCACTGCAGCAGTTTTTTAATGGACAGGATGTGAGTGGTGTGTTAGAGAGTGCTGTGGTAGACACCAGTATTCTGGAGCAGTATTTGAGCAATGAGACAGATCCCACTTTTATGTTACCCGACTCGCCACCAGATTCAGGATCAGAGCGCAGTTCTCCACCACAAATACCAGATTCAAGAAGGTCACCGGAGCAAAGCAGCAAGAATGTGTATAGACTATCAGAAGAGTCCTTCCCTCTGTCTTGTCCCTTTAAAGACAGGAAACATGATGTTGGCATACCCCTTGGGAAACAAATTAAAGACATTTCACCTGCTTCACTCCCTCAGTACAGTCTCAACACAGCTGAGAGTTACACACAGGCAACCACATCCCATAATGCACCCATCCATGCTGTCCCACTATATGCTCAGTGCCCACCAATGGGTCTTCCGACAGGACACATGCCAGCTAATGCAGCTGCTGCCTCCTCATGTGTGCCCCACGCAATGTGCTCAGAGACAATGTATCCTCATATGCCCCCAAAACATGATCAACGTGTAGGAAATATCTTACATGAGAATAAGAAAAGAAGAAGGTCAAACTCTTTTGAGGGGCACACAGAGCGGCACAGGTGTGCTGACCCAGTTTGGACCAAACCAACATTCTGTCCAGAAGGTGGATCATATGAAGCACAGTGTTATGACAGTGACACAGCTGGTGTAAGTCCAGTGGGCAGTGTGCACCAGCTGCTCACTTGGGACCAGTATCAGCCCAGTCATTGGTGCTCACTCCACAACAGTAGATCTGAAAGCCTaCCACCTCCAGGTTACCATGTGGATGCTGATAAGGGTTTCAGCTACTCCACAGCTGATGAAGCCTTTGTGTGTCAGAAGAAAAACCACTTCCAGGTGACAGTTCACATAGGGATGGTTGGAGATCCTAGATTTGTCAGAACGTCAAGAGGTCTCATACCCATAGAGTGCTTCCACCTGAATGTGTTTGGGGTCAAGCTTGAAGCACAGGACCATTTCATCACTATAGAGCAGTCGCAGTCAGACCGCAGCAAGAAGCCATTCTTACCAGTCAGAGTAAATCTGCCAGGAGACAAAATCACAAAGGTGACATTAGGAAGGTTACACTTCAGTGAAACCACagcaaataacatgagaaaaaaggGCAAGCCGAATCCTGACCAGAGGTACTTTAAGATGGTTGTTGGTCTGTATGCGACTGTGAAAGAGGAACGTTTTCTGCTGGTTGctaatgtttctgaaagaatcATTGTTAGGGCCTCCAACCCTGGTCAGTTTGAGAATGATAGTGACGTGCTCTGGCAAAAAGGACAGATCCCAGAGACCGTTGTGTGTCACGGGAGGGTTGGCATTAACACAGACAGCCCTGATGAGGCTTTGGTGGTTTGTGGGAATGCCAAGATAATGGGCAATGTCATGCATCCCTCAGACAGAAGGGCCAAACAAAACATTCAGGAAGTGGACTCAACGGAGCAGCTCAAGAGGATTGCTCAGATGAGAATAGTGGAATACGATTACAAACCAGAGTTTGCCTCAAGGATGGGAATTGATCAGTGTCATGAAACGGGAATCATAGCGCAGGAAGTCAAAGAACTCCTGCCTTCGGCCGTGAGGGAGATGGGTGACATCACGTGCATAAACGGGGAGACGATTGATCATTTTCTCATGGTGGACAAAGAGCAGATTTTTATGGAGAATGTAGGTGCTGTGAAGCAGCTGTGTAAACTCACAGATAACCTTGAGACACGTATTCAAGAGCTTGAGGTTTGGAACACTCGCTTGGCCAAGCTGAAGAGGTTGGGTAGCATGCAGTCCAATGGTGGAACTTCTGCTAAAGGGAAAATCCACAAAAACCACACACTCCATTCAAAACTTCCTCCGCCAACACCACCGCAGTCAAGCACAAACTACTTCTGTGGGAGATATCACAACTGTCTTCAACACAGAGTATTCCAAGCTAGTATTATCATGCTAGTAACAACCATGGCTCTTTGcgtCATCTCTATTACTGCACTTTATATGTTGACATTACAAGAAGACATGGACTTCAATAACAGTTTCAACAACAGCAATGTTATGCCAACTTACAGCACGACAGCATCGTCGACTACAGTGTTCTCCACGACCTCTCCTCGTCCCTGGCCTCCAGACATCGATGTCTccaatgtgttttattcagatGAAGTCTACTGCTGTccttcaaatttaatttataatcatAACGCTCAACTGACGGACACAACTGTCCCCTTCGATGCTCTTTCGCATGGAGTCATCAATTCAAGGAAAATGCAGAGAGAGAAGTGGTTAGAAAAACTTCCGGACAAAGTGAAAAATTCTACTGACTGGACAAACACAACTATACATTCCATCCTCGTTACGCAGAATCAACAAATTATAGATAAGCAGTACTGTCAGCAGGAGAATTGTGGGAAAGGAAACTACACCTACCTCATTCCCCTCAGTAAACACATCCCACCCAACATGCCCATAACCCTCCAAATGACCACAACTGAGTTGTTGGTGATTCACCTGTGCTCACATGACGAGAGTGAGCAGTGCTCCTCAGTACTTGACTACGATGGCTCAGAGTCAAACATTGCTCTCAACACACAGGGCTACATACATAAATGGACACTGCCAGTGGCAAATCACTACCACGCATCATACCATTTCCGCTCTTCTGTTGCTGGTTTGGCAGATTGTAACACTGATCTGAACTTTGCAGAAGTTTACTTTACTGACTACCACTTCCAGTTCTTCCGTCGCTGTGACTGATCAACCTTCAAAAAGCAATATCCAGTGATTTGACTGCACTAGTTAAATGCAGGCTGTAAATTATATACCGTAAAGAGTCTTTTTATGGGCAGATGTTTGTGTTgttgctggaaaaaaaactttggaaatatgtttgatattagtttattcttattttcatgttttgaaatCAGAAGGAAACATATGAACTCCAAAGAAAAGTAAAGCAGGTCTTCAAATAtgattttacatgtatatgtttcAACAATGAAGAGATGATTTTGTACTGAACTACATAATGAGATAATCTGATACTCATACTGAATTCATATCTCTACTGAACTGAATGCATTATGTAACCTGTGTGCAATGATGTTGACCAAATGAACATATGATTGTTTCAGAAGTCCAATTGTTTTAACAAGTTATTGaagttttttctaaatattgaACACTGCAAATAAAGGAagatttattctttaaaagtg

Function

NR:

description
PREDICTED: myelin regulatory factor-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236530.1 False 3406 mRNA 0.43 26 16400881 16427186
XM_043236532.1 True 5165 mRNA 0.40 26 16398632 16427186

Neighbor

gene id symbol gene type direction distance location
LOC122342597 rab3ip,LOC107709967,LOC107689177,LOC107757202,LOC107675141,LOC107554773 coding upstream 133 16378633 ~ 16398499 (+)
LOC122342595 NA coding upstream 20691 16374576 ~ 16377941 (+)
LOC122342219 LOC107554691,LOC107656224 coding upstream 753758 15638512 ~ 15644874 (+)
nup50 nup50,LOC107699201,LOC107562145,LOC107687567,LOC107601009,LOC107719874 coding upstream 796626 15595661 ~ 15602006 (+)
LOC122343379 ppm1j,LOC107668166,LOC107708158 coding upstream 1043077 15342262 ~ 15355555 (+)
ptprb LOC107709971,LOC107685369,LOC107738449,LOC107575178,LOC107562139 coding downstream 9205 16436391 ~ 16457297 (+)
LOC122342226 NA coding downstream 188159 16615345 ~ 16617218 (+)
chrna2b chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496,LOC108434998 coding downstream 273857 16701043 ~ 16710156 (+)
rhoj rhoj,LOC107697308,LOC107743974,LOC107701469,LOC107707080,LOC108257930 coding downstream 394927 16822113 ~ 16838424 (+)
six4b six4b,LOC107743978,LOC107589068,LOC107563693,LOC107697301,LOC107701468,LOC107718441 coding downstream 497831 16925017 ~ 16932206 (+)
G28901 NA non-coding upstream 340932 16057475 ~ 16057700 (+)
G28896 NA non-coding upstream 469794 15928131 ~ 15928838 (+)
G28890 NA non-coding upstream 557966 15840202 ~ 15840666 (+)
G28889 NA non-coding upstream 643504 15754813 ~ 15755128 (+)
G28888 NA non-coding upstream 660870 15737468 ~ 15737762 (+)
LOC122342600 NA non-coding downstream 30291 16457477 ~ 16461526 (+)
G28969 NA non-coding downstream 37259 16464445 ~ 16464690 (+)
G28985 NA non-coding downstream 47557 16474743 ~ 16475333 (+)
G28991 NA non-coding downstream 92225 16519411 ~ 16540160 (+)
G29011 NA non-coding downstream 182538 16609724 ~ 16610004 (+)
G28899 NA other upstream 412906 15985219 ~ 15985726 (+)
G28891 NA other upstream 556777 15841372 ~ 15841855 (+)
cdkn1d LOC107699204,LOC107719868,LOC107562144,LOC107601015,LOC107758204,LOC107687563 other upstream 743354 15565499 ~ 15655278 (+)
G28806 LOC107744205,LOC107601002,LOC107687568,LOC107699198 other upstream 842950 15439334 ~ 15555682 (+)
LOC122342869 NA other upstream 978329 15413147 ~ 15420303 (+)
G28982 NA other downstream 46712 16473898 ~ 16474381 (+)
atp5mj NA other downstream 611233 17038419 ~ 17040830 (+)
G29526 NA other downstream 1873229 18300415 ~ 18301189 (+)
G29545 NA other downstream 2009274 18436460 ~ 18461317 (+)
G29642 NA other downstream 2455993 18883179 ~ 18886402 (+)

Expression


Co-expression Network