LOC122342598


Basic Information

Item Value
gene id LOC122342598
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16477791 ~ 16483176 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236543.1
atgctgacagagaaaggctgtggttatgtgtctttagctctgacttcaaacccctcacacctgagagagctggatctgagctacaatcatcctggagattcaggagtgaagctgctctctgaaaaaatAGAGGACTCAACCTGCTCATTGGACAAACTGAAagTTGATCATGGAGGAGAAACCAGGATTACAGAAGGACCAAAGAAATggatgtgttttttcacactggatccaaacacagcacacactgaactcattctgtctgaggagaacagagcGGTGACGTGTGTGGAAGAGTCTCagtcgtatcctgatcatccagacagatttgatgaaGCAtctcagacatacaaaagaaaaacaatatccaCATGGGTGTGGAACAGACTCCTCCCTTTCCATGGATGGAATAAATAGGGCTTCCTGTTTGCGGGCCGGCCCCTCCTACTAGGAAGCACCAAAGGGAAAGAACTCAGAAACCACCACCAAAACATAAGTCACACTCGAATGTGCAACTTCCTTGTgacttagaaaaataaaaagaaacaaataaagttatttcaaacaaaa

Function

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236543.1 True 570 mRNA 0.44 5 16477791 16483176

Neighbor

gene id symbol gene type direction distance location
LOC122343883 NA coding downstream 457229 16020444 ~ 16020562 (-)
LOC122343926 NA coding downstream 457632 16020041 ~ 16020159 (-)
LOC122343872 NA coding downstream 459616 16018057 ~ 16018175 (-)
LOC122343847 NA coding downstream 460015 16017658 ~ 16017776 (-)
LOC122343860 NA coding downstream 466257 16011416 ~ 16011534 (-)
LOC122342885 LOC107749047,LOC107728228,LOC107671223 coding upstream 1391 16484567 ~ 16498839 (-)
LOC122342596 NA coding upstream 54804 16537980 ~ 16542902 (-)
LOC122342599 LOC107749047 coding upstream 89951 16573127 ~ 16593094 (-)
LOC122343211 ptk2bb,LOC107589060,LOC107697310,LOC107701495,LOC107563684,LOC107707077 coding upstream 227348 16710524 ~ 16724794 (-)
kcnh5a kcnh5a,LOC107743971,LOC107697309,LOC107563685,LOC107701494,LOC107707078,LOC108434995 coding upstream 265540 16748716 ~ 16821470 (-)
G28970 NA non-coding downstream 13112 16464445 ~ 16464679 (-)
G28966 NA non-coding downstream 16280 16460762 ~ 16461511 (-)
G28935 NA non-coding downstream 57652 16412527 ~ 16420139 (-)
G28933 NA non-coding downstream 57835 16411860 ~ 16419956 (-)
G28916 NA non-coding downstream 94121 16378700 ~ 16383670 (-)
LOC122342601 NA non-coding upstream 61778 16544954 ~ 16545621 (-)
LOC122342602 NA non-coding upstream 67157 16550333 ~ 16551004 (-)
G29012 NA non-coding upstream 126460 16609636 ~ 16609999 (-)
G29021 NA non-coding upstream 217892 16701068 ~ 16701671 (-)
LOC122342882 NA non-coding upstream 425033 16908209 ~ 16924965 (-)
G28898 NA other downstream 544927 15932494 ~ 15932864 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other downstream 866216 15601440 ~ 15611575 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other downstream 1450128 15024587 ~ 15027663 (-)
LOC122342642 pfkfb3 other downstream 1667080 14808543 ~ 14810711 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other downstream 1773169 14687873 ~ 14704622 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other upstream 224598 16707774 ~ 16708960 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other upstream 402977 16886153 ~ 16900295 (-)
G29135 NA other upstream 523751 17006927 ~ 17017823 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other upstream 635167 17118343 ~ 17122129 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 1153847 17637023 ~ 17638742 (-)

Expression


Co-expression Network