glt8d2 (glt8d2)


Basic Information

Item Value
gene id glt8d2
gene name glt8d2
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4841693 ~ 4847744 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236549.1
TGTGTGGATTTCAGAGATTTTAAGAAGACATCTGGAcccaaaaaaatgcatagcCGGGTCTCAGGAGGATAAATAAAGGAAACGCAGCGCTGAGCATCCGTGAGTTTCTCTGGACTTCTCCGGTTTGGCCACGCCCACCCGACCGCGCCGCACGGATTAAAGAACGTTAGCGCGCGACTGACTGAGGCGAATTAAACGGAAATCTCTGTTGCTGATGGAGAAACATGGCTTTGCTGAGGAAAATCAACCGTGGGCTCCTCGTTCTGCTCATCCTGGTGGCTTTTGCTCTTCTTTACAAAAAGACCAGACTACGGACACTGCCCAAGCATACAGGACTCATGAAAGATGGGGCCAAAACGGATGCAGAGGACGAGAAAGCCGCGGTCACTGACATCCCTGTGGTCATCTGTGCATCAGAGGAGCGCACTGGCGCTGCCATCGCAACCATCAACAGCGTCTACAGCAACAGCCGTGCCAGCATCTTCTTCTACATAGTGACCCTGCGAGATGCCATCAAGAAGATAAGGGAATACATAGAGAAGACCAAGCTGAGAAACATCAAATACAAGATCCTGGAGTTCAATCCGATGGTACTGAAGGGGAAAGTCAAACCGGATTCCTCCAGACCAGAGCTGCTGCATCCTCTAAACTTTGTGAGGTTCTACTTGCCACTTCTTGCCATTGAAAATCACGAGCGGGTTGTTTACCTGGATGATGATGTCATAGTGCAAGGAGATATACAGGAACTGTATGACATAAAGCTGAAAGCGGGACATGCTGCTGCGTTCGCCTCAGACTGTGATCTGCCCTCCACACATGAGATGGTGCGCAGTGTGGGGATGCAGACAACTTATATGGGCTTTCTGGACTACCGCAAAGAGGAAGTGAGAGATTTGGGCATCAACCCCTCCGACTGCTCCTTTAATCCAGGCGTTTTTGTAGCAGACATTGGTGAATGGAAAAggcaaaaaataactaaacagcTGGAGAAATGGATGGCTAAGAATGTCAGGGAGAATCTGTACAGCAGTGCTATGGCAGGCGGTGTGGCCACCCCACCAATGCTGATCGTCTTTCATGATAAATACACCACTATTGATCCAATGTGGCACGTCAGACATCTAGGCTGGAGTCCTGATACCCGTTATCCCAGATCCTTTCTCAAAGATGCACGCTTACTGCACTGGAATGGCCGTTTCAAGCCCTGGAACTACCCCTGCGTCCATCTGGACATCTGGGAGAAATGGTTTATCCCAGACCCCACAGGAAAATTCACCCTGGTACGACCATGAACAATATTCAGAATTAAACTTAGTcacttttactttaaacaaattGAAGAGATTAGgttactggggaaaaaaa
>XM_043236550.1
CCTACATTATTACGATTTAAGATCATGTTTGTCGTGAAATCTCATGGATATCTGATGTCGGTGAGCACGTTTTTTGCTCTGCTgtcctgcaaaacaggaatgtgtcctgtgtgtgtttgtggtggaGGAGGGGTCCGTCCCAGAGTAAATGAGTCAACCGTGGGCTCCTCGTTCTGCTCATCCTGGTGGCTTTTGCTCTTCTTTACAAAAAGACCAGACTACGGACACTGCCCAAGCATACAGGACTCATGAAAGATGGGGCCAAAACGGATGCAGAGGACGAGAAAGCCGCGGTCACTGACATCCCTGTGGTCATCTGTGCATCAGAGGAGCGCACTGGCGCTGCCATCGCAACCATCAACAGCGTCTACAGCAACAGCCGTGCCAGCATCTTCTTCTACATAGTGACCCTGCGAGATGCCATCAAGAAGATAAGGGAATACATAGAGAAGACCAAGCTGAGAAACATCAAATACAAGATCCTGGAGTTCAATCCGATGGTACTGAAGGGGAAAGTCAAACCGGATTCCTCCAGACCAGAGCTGCTGCATCCTCTAAACTTTGTGAGGTTCTACTTGCCACTTCTTGCCATTGAAAATCACGAGCGGGTTGTTTACCTGGATGATGATGTCATAGTGCAAGGAGATATACAGGAACTGTATGACATAAAGCTGAAAGCGGGACATGCTGCTGCGTTCGCCTCAGACTGTGATCTGCCCTCCACACATGAGATGGTGCGCAGTGTGGGGATGCAGACAACTTATATGGGCTTTCTGGACTACCGCAAAGAGGAAGTGAGAGATTTGGGCATCAACCCCTCCGACTGCTCCTTTAATCCAGGCGTTTTTGTAGCAGACATTGGTGAATGGAAAAggcaaaaaataactaaacagcTGGAGAAATGGATGGCTAAGAATGTCAGGGAGAATCTGTACAGCAGTGCTATGGCAGGCGGTGTGGCCACCCCACCAATGCTGATCGTCTTTCATGATAAATACACCACTATTGATCCAATGTGGCACGTCAGACATCTAGGCTGGAGTCCTGATACCCGTTATCCCAGATCCTTTCTCAAAGATGCACGCTTACTGCACTGGAATGGCCGTTTCAAGCCCTGGAACTACCCCTGCGTCCATCTGGACATCTGGGAGAAATGGTTTATCCCAGACCCCACAGGAAAATTCACCCTGGTACGACCATGAACAATATTCAGAATTAAACTTAGTcacttttactttaaacaaattGAAGAGATTAGgttactggggaaaaaaa

Function

symbol description
glt8d2 Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human GLT8D2 (glycosyltransferase 8 domain containing 2).

NR:

description
PREDICTED: glycosyltransferase 8 domain-containing protein 2

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236549.1 True 1365 mRNA 0.48 10 4841693 4847744
XM_043236550.1 False 1275 mRNA 0.48 9 4843284 4847744

Neighbor

gene id symbol gene type direction distance location
fbxo18 LOC107743400,LOC107658809,LOC107656287,LOC107581284 coding upstream 1088 4832410 ~ 4840605 (+)
adm2a LOC107592207,LOC107743397,LOC107726065,LOC107580886,LOC107656286 coding upstream 14041 4817048 ~ 4827652 (+)
tspan12 tspan12,LOC107592202,LOC107658802,LOC107656244,LOC107565667,LOC107744106 coding upstream 412298 4415145 ~ 4429395 (+)
tmem243b tmem243b,tmem243,LOC107592214,LOC107744120,LOC107580823,LOC107656297 coding upstream 661376 4176998 ~ 4180317 (+)
meig1 meig1,LOC107592215,LOC107725971,LOC107581293,LOC107658840,LOC107744135 coding upstream 665083 4175425 ~ 4176610 (+)
ttc41 LOC107656216,LOC107743954,LOC107581281 coding downstream 6321 4854065 ~ 4861148 (+)
parp12b parp12b,LOC107726044,LOC107592257,LOC107743438,LOC107658812,LOC107656291,LOC107581297 coding downstream 13584 4861328 ~ 4867182 (+)
si:dkeyp-27e10.3 si:dkeyp-27e10.3,LOC107726043,LOC107743425,LOC107656289,LOC107580867,LOC107592246 coding downstream 20278 4868022 ~ 4888613 (+)
LOC122343294 svopl,LOC107725968,LOC107658766,LOC107744112,LOC107656247 coding downstream 41679 4889423 ~ 4894735 (+)
LOC122343293 LOC107658814,LOC107726023,LOC107592209,LOC107656292 coding downstream 47138 4894882 ~ 4928702 (+)
G26008 NA non-coding upstream 73872 4765864 ~ 4767821 (+)
G25976 LOC107743325,LOC107658806,LOC107580925 non-coding upstream 98090 4730837 ~ 4743603 (+)
G25981 flncb,LOC107592205 non-coding upstream 150910 4689375 ~ 4690783 (+)
G25941 NA non-coding upstream 406056 4432605 ~ 4435637 (+)
G25940 NA non-coding upstream 409735 4431623 ~ 4431958 (+)
G26043 NA non-coding downstream 133465 4981209 ~ 4994260 (+)
LOC122343429 NA non-coding downstream 135477 4983221 ~ 4985211 (+)
LOC122342533 NA non-coding downstream 138435 4986179 ~ 4988188 (+)
LOC122342534 NA non-coding downstream 141423 4989167 ~ 4991312 (+)
LOC122343284 NA non-coding downstream 144330 4992074 ~ 4994254 (+)
G25958 NA other upstream 212794 4550163 ~ 4628899 (+)
G25838 si:dkey-153k10.9,LOC100147981,LOC107743973,LOC107656294,LOC107725885,LOC107592247 other upstream 606449 4232908 ~ 4235244 (+)
G25837 si:dkey-153k10.9,LOC107592247,LOC107658817,LOC107743973,LOC107656294,LOC107581279 other upstream 610601 4229629 ~ 4231092 (+)
G25551 NA other upstream 1103099 3737502 ~ 3738594 (+)
G25514 NA other upstream 1339599 3481629 ~ 3502094 (+)
LOC122343397 LOC107580843,LOC107725884,LOC107658833,LOC107656293,LOC108428166 other downstream 81727 4929471 ~ 4944880 (+)
pcloa pcloa,LOC107757237,LOC107694308,LOC107577557,LOC107560734 other downstream 506588 5354332 ~ 5397886 (+)
LOC122342465 LOC107560737,LOC107742176,LOC107757234,LOC107690649,LOC107589816,LOC107694311,LOC107673148,LOC107559271,LOC107738440,LOC107670367,LOC556054,LOC108414180 other downstream 934200 5781944 ~ 5862313 (+)
LOC122342837 grm4,LOC107549321,LOC107716363,LOC107708172,LOC107569297,LOC107666973,LOC107678149 other downstream 1014863 5862607 ~ 5898827 (+)
vhll NA other downstream 1540799 6388543 ~ 6390927 (+)

Expression


Co-expression Network