gxylt1b (gxylt1,LOC107729836,LOC107582079,LOC107694260)


Basic Information

Item Value
gene id gxylt1b
gene name gxylt1,LOC107729836,LOC107582079,LOC107694260
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 6934093 ~ 6940296 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236563.1
AAGCCCTACGGGCtttcataaaatatgcataagaATAATTTTAGCCTACATGTATGGCTGTTGCTTTTGATATGTATTGCTCTAAACATATTAGTGAATGTTTTAAAGATATTACTAATTTAGTTATTAGCCATTATTACACGAGGCAAGCTTTCGTTATACCAGTAGATACGGTACtaagaattcattttaattttaccgTCTTGgcaaaggctgtttttttttaatttttacaagaATTGCAAGATTAAAATTAGATGCAGTAACAATTGCCATTTATTATGAATCCTTTTAATTCAATGTCACATTGTTCTgttaaacacaacaaaaaatattagcatttcattattaataaaaaaaaaatagaagtctgcataataactaataactttAAGCTGCTATTACGTTAAAGGAAAAACGTAGTGGGGGGATGGGTGGTGGTCGTTAGTTTAGGAGAATTGACTCATTTTGCGAATCGGTTCCTGCGAACAGATCGTTTCAAACAACCGATTCAGTGGCTCTTTAGGCAATTACGTCATTTTGTAGTCTCTGACAGCCTGGCATAGTATTTCTTCTACTCCAATaaacattaggatattaagtaaagatcatatcCCACGAAGATGTttagtacatttcctaccataaatgtatcaaaaactTGGGCAAACCATAACAAtgaaatatattctatatatctctatatattgCATGTACCCAATTTCAGTTTGTAGCAGCTAATAACTGTTAagcaaaaatgctaatatatatatatatatatatataaagcttttGCTAAAACTCAAATttctaaacacatttaaagaacaCCCTAGTTGCGACTTCTGCCGTCCCTGTCTCGCGAATCAGTTCAATTGATTCTCGTAAAAGATCCGAATCAAAAGAACAATTCGTTCGCGGACCGGACATCGCTAGTGGTCATTAGTGGGCGAGTACACGCACCAGTGTACTCTTTTCGAGTAAAGCAGTTCCCGTGTTTTGTAGAATGCGTATATATCTTCGTACTTTTAGTTTGTGCATAGTTATCGCTCTTTTGTCTTTAgtgtttttgttcagtaaacACGACGCTAAAGGTTTTTCGGCCGTTTTAAAGCAAGATAGGGCGCCGATGGAGCCGTCCGTCCCGAAGAACTTAAACGGGgtgaaatcaaaacaacaagCCGCCGGGACCACATCACACAGACCGCGAGATGTTGCTCACAAGGTGTCTGCAGCGGGACAGAGAGAGACGGTTGAGCTGGCTGCGGTGGCTTGTGGAGAGAGACACGAAGAAGCCGTCAACATGCTCAAGAGCGCAGCCATGCTCAGCAGCCGAGCTTTGAGATTTCACATCTTTGCAGAGGAGCAGTTACACGCCAGCATAAAAACAACACTGGATTCCTGGCCAGCTTTCATCCAGGCGAAGTTCAGCTATGTGGTTCACCCCATTTCATTCCCCCATGAGAACCACGAAGAGTGGAGTCAGCTTTTCAAGCCCTGTGCATCACAGAGACTCTTCTTACCGATGATTCTGAAGGAGGTGGACTCCTTACTGTACATGGACACCGATGTCCTCTTTCTGCAGCCTGTAGAGCTGATCTGGGACATGCTGACACGTTTTAATTCCACACAGTTAGTAGCCATGGCACCAGAGCACGAGGAGCCACGCATTGCCTGGTATAGTCGCTTCTCCCGGCATCCGTATTATGGAAAAACCGGCATCAACTCGGGCGTCATGCTGATGAATTTGACCCGGATGCGAATGACGCAATTCAGAAACGACATGACCTCCGTAGGTCTGCACTGGGACGAGCTTCTGATGCCTCTGTTACAGAAATACAAGCTTAACATAACCTGGGGCGATCAAGATCTGATCAACATCATCTTCCATTATAATCCAGAGATGGTACTTCCCTTCCCCTGTCACTGGAACTACCGTCCCGACCACTGCATCTACGGCAGCAACTGCATCCCGGCAGAGGAAGAGGGGGTTTTCATGCTGCACGGCAACCGAGGGGTGTTTCACAGCGACAAACAGCCAGCCTTCAAGGCTGTGTATGACGCTTTCAAACATGTGagttgtattattttagttGCTACTTCACCCATTACAAAGCTAATAAATCGCTGTTTTTTCCTGGCAGTACATATTTGGAGAGGATCTCATGAACTCCTTCTTGTTACCCCTGGAGGAGGCGCTGAACGGAACCACTCACACATACTGTGGGAAAGCCAGTCATTTCTTTACCAGAGGACTTGGAAGGTCTGCGAGGAAGATTCGGAGAACGCTTCCAGCCGGTGGCTGAGTTGTAGTGCTGCTgctgaataatgacagaaatgtatttcTCCGAGACAGGAGAGAGGCGACGCTGCTCTTCCAGTCGAGTCTGTGCAATATTAGCAGGGCGGCCTGAATGATGAAACGGGaatttaaactgatttttctctttaaaatcgCAGTTAAAGGGACggtgaaaaacaaataaaagtgattatgcaaatgtaattccaaacctcataaaacaagtttttttaagTTAGCCTGACTTCTTGTCCGTTGATTTGGTTCAAAAGAAGTTGAAATAAGCCTGGCTTTATGAAACAGGCCCCAGAACGACTTAATTTCCAGACAAAATATAAGGTAAAGTCTTGTGACTGCTATTATGTTTCTTTTCTAGTGCTTTTGGATGCATTGTTTCTTTAAAACGGATATTGAATGTATTGAGAGAGGTTATAGCGTAAACtacttgaaaatgtaaatattgtattctttttacataatgtttgtatgaaataaaaatatatatgactaA
>XM_043236564.1
AAGCCCTACGGGCtttcataaaatatgcataagaATAATTTTAGCCTACATGTATGGCTGTTGCTTTTGATATGTATTGCTCTAAACATATTAGTGAATGTTTTAAAGATATTACTAATTTAGTTATTAGCCATTATTACACGAGGCAAGCTTTCGTTATACCAGTAGATACGGTACtaagaattcattttaattttaccgTCTTGgcaaaggctgtttttttttaatttttacaagaATTGCAAGATTAAAATTAGATGCAGTAACAATTGCCATTTATTATGAATCCTTTTAATTCAATGTCACATTGTTCTgttaaacacaacaaaaaatattagcatttcattattaataaaaaaaaaatagaagtctgcataataactaataactttAAGCTGCTATTACGTTAAAGGAAAAACGTAGTGGGGGGATGGGTGGTGGTCGTTAGTTTAGGAGAATTGACTCATTTTGCGAATCGGTTCCTGCGAACAGATCGTTTCAAACAACCGATTCAGTGGCTCTTTAGGCAATTACGTCATTTTGTAGTCTCTGACAGCCTGGCATAGTATTTCTTCTACTCCAATaaacattaggatattaagtaaagatcatatcCCACGAAGATGTttagtacatttcctaccataaatgtatcaaaaactTGGGCAAACCATAACAAtgaaatatattctatatatctctatatattgCATGTACCCAATTTCAGTTTGTAGCAGCTAATAACTGTTAagcaaaaatgctaatatatatatatatatatatataaagcttttGCTAAAACTCAAATttctaaacacatttaaagaacaCCCTAGTTGCGACTTCTGCCGTCCCTGTCTCGCGAATCAGTTCAATTGATTCTCGTAAAAGATCCGAATCAAAAGAACAATTCGTTCGCGGACCGGACATCGCTAGTGGTCATTAGTGGGCGAGTACACGCACCAGTGTACTCTTTTCGAGTAAAGCAGTTCCCGTGTTTTGTAGAATGCGTATATATCTTCGTACTTTTAGTTTGTGCATAGTTATCGCTCTTTTGTCTTTAgtgtttttgttcagtaaacACGACGCTAAAGGTTTTTCGGCCGTTTTAAAGCAAGATAGGGCGCCGATGGAGCCGTCCGTCCCGAAGAACTTAAACGGGgtgaaatcaaaacaacaagCCGCCGGGACCACATCACACAGACCGCGAGATGTTGCTCACAAGGTGTCTGCAGCGGGACAGAGAGAGACGGTTGAGCTGGCTGCGGTGGCTTGTGGAGAGAGACACGAAGAAGCCGTCAACATGCTCAAGAGCGCAGCCATGCTCAGCAGCCGAGCTTTGAGATTTCACATCTTTGCAGAGGAGCAGTTACACGCCAGCATAAAAACAACACTGGATTCCTGGCCAGCTTTCATCCAGGCGAAGTTCAGCTATGTGGTTCACCCCATTTCATTCCCCCATGAGAACCACGAAGAGTGGAGTCAGCTTTTCAAGCCCTGTGCATCACAGAGACTCTTCTTACCGATGATTCTGAAGGAGGTGGACTCCTTACTGTACATGGACACCGATGTCCTCTTTCTGCAGCCTGTAGAGCTGATCTGGGACATGCTGACACGTTTTAATTCCACACAGTTAGTAGCCATGGCACCAGAGCACGAGGAGCCACGCATTGCCTGGTATAGTCGCTTCTCCCGGCATCCGTATTATGGAAAAACCGGCATCAACTCGGGCGTCATGCTGATGAATTTGACCCGGATGCGAATGACGCAATTCAGAAACGACATGACCTCCGTAGGTCTGCACTGGGACGAGCTTCTGATGCCTCTGTTACAGAAATACAAGCTTAACATAACCTGGGGCGATCAAGATCTGATCAACATCATCTTCCATTATAATCCAGAGATGGTACTTCCCTTCCCCTGTCACTGGAACTACCGTCCCGACCACTGCATCTACGGCAGCAACTGCATCCCGGCAGAGGAAGAGGGGGTTTTCATGCTGCACGGCAACCGAGGGGTGTTTCACAGCGACAAACAGCCAGCCTTCAAGGCTGTGTATGACGCTTTCAAACATTACATATTTGGAGAGGATCTCATGAACTCCTTCTTGTTACCCCTGGAGGAGGCGCTGAACGGAACCACTCACACATACTGTGGGAAAGCCAGTCATTTCTTTACCAGAGGACTTGGAAGGTCTGCGAGGAAGATTCGGAGAACGCTTCCAGCCGGTGGCTGAGTTGTAGTGCTGCTgctgaataatgacagaaatgtatttcTCCGAGACAGGAGAGAGGCGACGCTGCTCTTCCAGTCGAGTCTGTGCAATATTAGCAGGGCGGCCTGAATGATGAAACGGGaatttaaactgatttttctctttaaaatcgCAGTTAAAGGGACggtgaaaaacaaataaaagtgattatgcaaatgtaattccaaacctcataaaacaagtttttttaagTTAGCCTGACTTCTTGTCCGTTGATTTGGTTCAAAAGAAGTTGAAATAAGCCTGGCTTTATGAAACAGGCCCCAGAACGACTTAATTTCCAGACAAAATATAAGGTAAAGTCTTGTGACTGCTATTATGTTTCTTTTCTAGTGCTTTTGGATGCATTGTTTCTTTAAAACGGATATTGAATGTATTGAGAGAGGTTATAGCGTAAACtacttgaaaatgtaaatattgtattctttttacataatgtttgtatgaaataaaaatatatatgactaA
>XM_043236565.1
AAGCCCTACGGGCtttcataaaatatgcataagaATAATTTTAGCCTACATGTATGGCTGTTGCTTTTGATATGTATTGCTCTAAACATATTAGTGAATGTTTTAAAGATATTACTAATTTAGTTATTAGCCATTATTACACGAGGCAAGCTTTCGTTATACCAGTAGATACGGTACtaagaattcattttaattttaccgTCTTGgcaaaggctgtttttttttaatttttacaagaATTGCAAGATTAAAATTAGATGCAGTAACAATTGCCATTTATTATGAATCCTTTTAATTCAATGTCACATTGTTCTgttaaacacaacaaaaaatattagcatttcattattaataaaaaaaaaatagaagtctgcataataactaataactttAAGCTGCTATTACGTTAAAGGAAAAACGTAGTGGGGGGATGGGTGGTGGTCGTTAGTTTAGGAGAATTGACTCATTTTGCGAATCGGTTCCTGCGAACAGATCGTTTCAAACAACCGATTCAGTGGCTCTTTAGGCAATTACGTCATTTTGTAGTCTCTGACAGCCTGGCATAGTATTTCTTCTACTCCAATaaacattaggatattaagtaaagatcatatcCCACGAAGATGTttagtacatttcctaccataaatgtatcaaaaactTGGGCAAACCATAACAAtgaaatatattctatatatctctatatattgCATGTACCCAATTTCAGTTTGTAGCAGCTAATAACTGTTAagcaaaaatgctaatatatatatatatatatatataaagcttttGCTAAAACTCAAATttctaaacacatttaaagaacaCCCTAGTTGCGACTTCTGCCGTCCCTGTCTCGCGAATCAGTTCAATTGATTCTCGTAAAAGATCCGAATCAAAAGAACAATTCGTTCGCGGACCGGACATCGCTAGTGGTCATTAGTGGGCGAGTACACGCACCAGTGTACTCTTTTCGAGTAAAGCAGTTCCCGTGTTTTGTAGAATGCGTATATATCTTCGTACTTTTAGTTTGTGCATAGTTATCGCTCTTTTGTCTTTAgtgtttttgttcagtaaacACGACGCTAAAGGTTTTTCGGCCGTTTTAAAGCAAGATAGGGCGCCGATGGAGCCGTCCGTCCCGAAGAACTTAAACGGGgtgaaatcaaaacaacaagCCGCCGGGACCACATCACACAGACCGCGAGATGTTGCTCACAAGGTGTCTGCAGCGGGACAGAGAGAGACGGTTGAGCTGGCTGCGGTGGCTTGTGGAGAGAGACACGAAGAAGCCGTCAACATGCTCAAGAGCGCAGCCATGCTCAGCAGCCGAGCTTTGAGATTTCACATCTTTGCAGAGGAGCAGTTACACGCCAGCATAAAAACAACACTGGATTCCTGGCCAGCTTTCATCCAGGCGAAGTTCAGCTATGTGGTTCACCCCATTTCATTCCCCCATGAGAACCACGAAGAGTGGAGTCAGCTTTTCAAGCCCTGTGCATCACAGAGACTCTTCTTACCGATGATTCTGAAGGAGGTGGACTCCTTACTGTACATGGACACCGATGTCCTCTTTCTGCAGCCTGTAGAGCTGATCTGGGACATGCTGACACGTTTTAATTCCACACAGTTAGTAGCCATGGCACCAGAGCACGAGGAGCCACGCATTGCCTGGTATAGTCGCTTCTCCCGGCATCCGTATTATGGAAAAACCGGCATCAACTCGGGCGTCATGCTGATGAATTTGACCCGGATGCGAATGACGCAATTCAGAAACGACATGACCTCCGTAGGTCTGCACTGGGACGAGCTTCTGATGCCTCTGTTACAGAAATACAAGCTTAACATAACCTGGGGCGATCAAGATCTGATCAACATCATCTTCCATTATAATCCAGCAACTGCATCCCGGCAGAGGAAGAGGGGGTTTTCATGCTGCACGGCAACCGAGGGGTGTTTCACAGCGACAAACAGCCAGCCTTCAAGGCTGTGTATGACGCTTTCAAACATTACATATTTGGAGAGGATCTCATGAACTCCTTCTTGTTACCCCTGGAGGAGGCGCTGAACGGAACCACTCACACATACTGTGGGAAAGCCAGTCATTTCTTTACCAGAGGACTTGGAAGGTCTGCGAGGAAGATTCGGAGAACGCTTCCAGCCGGTGGCTGAGTTGTAGTGCTGCT

Function

symbol description
gxylt1 Enables UDP-xylosyltransferase activity. Involved in O-glycan processing. Predicted to be integral component of membrane.

NR:

description
PREDICTED: glucoside xylosyltransferase 1

GO:

id name namespace
GO:0016266 O-glycan processing biological_process
GO:0016021 integral component of membrane cellular_component
GO:0035252 UDP-xylosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236563.1 True 2813 mRNA 0.41 6 6934093 6940296
XM_043236564.1 False 2743 mRNA 0.41 7 6934093 6940296
XM_043236565.1 False 2189 mRNA 0.43 7 6934586 6940296

Neighbor

gene id symbol gene type direction distance location
akap14 NA coding downstream 140658 6792367 ~ 6793435 (-)
irf5 LOC107577905,LOC107587141,LOC107725599,LOC107655585,LOC107694268,LOC107757280 coding downstream 150058 6776299 ~ 6784035 (-)
opn1sw1 opn1sw coding downstream 175905 6756012 ~ 6758188 (-)
mdm1 LOC107577767,LOC107655590,LOC107725562,LOC107694231 coding downstream 183843 6740893 ~ 6750250 (-)
il26 NA coding downstream 199364 6732341 ~ 6734729 (-)
yaf2 yaf2,LOC108439407,LOC105018284,LOC107725590 coding upstream 150 6940446 ~ 6950897 (-)
zcrb1 zcrb1 coding upstream 11596 6951892 ~ 6954640 (-)
prickle1b prickle1,LOC107725650,LOC107587146,LOC107694259,LOC107729853 coding upstream 30251 6970547 ~ 6992898 (-)
pus7l pus7l,LOC107694257,LOC107729857,LOC107591455,LOC107729827 coding upstream 145018 7085314 ~ 7091042 (-)
twf1b twf1,twf1b,LOC107587151,LOC107582633,LOC107694256,LOC107729862 coding upstream 151272 7091568 ~ 7099253 (-)
G26790 LOC107725579,LOC107587145 non-coding downstream 25598 6845559 ~ 6908495 (-)
G26796 NA non-coding downstream 70711 6862723 ~ 6863382 (-)
G26795 cntn1b,cntn1,LOC107581848,LOC107757284,LOC107694230,LOC107725506 non-coding downstream 71846 6860074 ~ 6862247 (-)
G26787 LOC107725579,LOC107655582 non-coding downstream 90244 6841974 ~ 6843849 (-)
LOC122342911 NA non-coding downstream 544892 6377116 ~ 6389201 (-)
LOC122343305 NA non-coding upstream 226510 7166806 ~ 7189549 (-)
G26832 NA non-coding upstream 379206 7319502 ~ 7319725 (-)
G26846 NA non-coding upstream 432877 7373173 ~ 7373595 (-)
LOC122343472 NA non-coding upstream 459370 7399666 ~ 7456641 (-)
G26956 NA non-coding upstream 914453 7854749 ~ 7856511 (-)
il22 NA other downstream 193352 6737641 ~ 6740741 (-)
msrb3 msrb3,LOC107725596,LOC107587134,LOC107757268,LOC107561995 other downstream 572609 6350491 ~ 6361484 (-)
arhgef39 arhgef39,LOC107725686,LOC107655603,LOC107757260,LOC107694288 other downstream 681445 6085892 ~ 6252648 (-)
mrps33 mrps33,LOC107694294,LOC107597883,LOC107725593,LOC107600452,LOC107655561 other downstream 994078 5938055 ~ 5940015 (-)
G26462 NA other downstream 1020555 5906755 ~ 5913538 (-)
si:dkey-261e22.4 NA other upstream 274038 7214334 ~ 7220911 (-)
G26951 NA other upstream 614819 7555115 ~ 7558453 (-)
LOC122343432 NA other upstream 1307615 8247911 ~ 8249927 (-)
G27232 LOC107589947,LOC107725677,LOC107659846,LOC107586091,LOC107694692 other upstream 1520210 8460506 ~ 8468028 (-)
slc25a3a slc25a3a,slc25a3,LOC107744906,LOC107586622,LOC108437945,LOC105897470,LOC108279629,LOC107694680,LOC107593070 other upstream 1573334 8513630 ~ 8517583 (-)

Expression


Co-expression Network