LOC122342626 (gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096)


Basic Information

Item Value
gene id LOC122342626
gene name gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10463761 ~ 10476981 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236582.1
TCGGGATCCGCCTTCGTGCCCATGTCTCCTATCGTCTGTAAACACCGCGAGTGATGTCGGGATCGGCAGACTGACGGCTTTCGTTTCGTTTCGAGTCGATTGTCATCGATCGAGGTGTTTCTTTTAGGTCACGGGGGAGGTCGGCCAGCCGGATCACCGCCAACTCCCGAACCGATGCAGTTTGTCCGATTCTTTTTAAAGAATCGGTTCGATCGAACGATTGGTTCTGGCGACTCGGCGCCGGACGTCTTACGATGTTTAACGTTCAGCTCGTCGGGATAAACCGGAGCGACTCGTGAGCTTTAACACGCAATGCCTCTAAGTCCAAGTGCGTTTGACTAGAAAGTTTATGTCGCTAAATGACTCTGCCGAGGCGTGAAATCGGGTCATTTCCTCAATCTCGGGTCTAGTGACCTGCTCGCTGCGAAATCTGTGCGGGACAAACAACACACATGTTGAGATTAAACCCCGTCTTCGACACTCAAAAAGATGTCGTGTCGAGCATTTTGGCTAAGGAGGAAAGAACGAATATAGGTGTTCTCGAGCCTCGCATTGTGAGTGTGGAGAGAGATGGAGGGGTCGTGTACTCTTGGAGAGGGGCAACGGGAGCCACGAGAATCGGGAAGTACGACCCTCGCAGTACAGAGAATAAGCTCCTCTACACTTTTGACAAGCAAGTGTGTGTCAGCAGCTGCTCTTTAAATAAAGAGGAAACACTCCTAGCGGTCAGTCTATCTCAGTCCACGCAGGGAGAAGGCCGCATTAAACCAGtgtCGAAATGTTTAACTCTTCTCATTGAGATACACCCAATCAACAACACAAAGGTCCTGAAGGCGGTGGACTGCAAAGTCAAAGTGCAGTTTCTTTATCCTAAGACATGTCGGACCACCGTACTGGAGAGTCACCTGCTGTTGGCGGCGGAAGACGGCTATGTTGATCAGTACCACATTACACTGACGAGGCAGGAGGGCTACAGAGTGGTGATGCAGAATCCTGAGCGTCTGAGCAGAGAGAGAGTTGCGGAGGACTTCAGTTGGGTCCAGTGGGACTCGGATACTCAAAGACTCTTCTACCTCACCGCACGGGAAAAACACGCACTGAAGTGTGTACAGTTTTACCCCGACCGCAACTTCGAGACCGTGTTTGAGCTTCCGCTGGAGACGCCCAGTGTTTCTCCTGCCGCCAACTCTGTGAGGTTTGTTAATTTCGGACACGATCACTATCAGCACACGAGGGACGAGGGTCTCAGGTTAGAGGTGTTCACCAGCCCAACAGAAAGAACCATGTGTGTGTGCTACAGCCATCCAGTCCGCTGGCATAAGGACGCGACCTACACTATTGCATTTGTGCACAGAGGTTGCAGTAAGACGTTCACCGTGTCTCTAGAGAAAGACTCTACACCTGCTAATCTGCCGACCATGCATCCCATCTTCATTCATCTGGATTATTATATAGTGGTGTACCTGGCTGATCATTTCCTGCACCTCATCAACTGCAGACAACAAGACCTGCTCTGCTACAGTGTTTTCCTGTCTGGGGCAGATGGTCACATTGAAGCCCTGGGTTCAGGCAGAGAAGTTGTGAGCGTGTCTGGCAGCAGGCTGCTTGATGTCCACGCCGGCAGGATGTACACCACGGAGCTCAATCCAGACTTCCTGCTTGAGCTTCTCAGTCCAGACAGGCCAGAGGCCCAGCGGCTTGCTGCTCTGCACTGCATGCTGGTCTACCTTCAGCCAAATCCTGTAATAGAGTTCAAGATTATAAACTGGATCAGCGAGAATGTCATGAGCTTTGATGCTTTTGATCAGATTCAGGAATTTATTCTAGCAACCCTCTACAGAATAAGCTACCAGCAGTGTGTGAGCCTAGATAAGCTGTTGCCGTACTCCGGTGTGTTCGAGAAAAAGgAGCTTCCTGTGGCTCTGACAGCAATCCCTGGGGTAAAGTGCACTCCTGAACTGCTCTGTCAGTCAGTAATTAAAGGGAAGCCTAAAAGCCTGCAGGGTTACTGGGAGGAGCTTCAGCATGTTTTGGACAGGATGAGGTACTTTGAGGCGGTGCCGAGCCCGCGCTTCAGGTCCAGTCTGATTAAAGAGGACTGGGACAGATTCCAGTCTTCTGCGAACTCGGAGAAGAAGAAATCTCCCGGTCATCGCCAAATTGAGGAGAACACAAAAAAAGTTCTGTCCATGGTGGACACTTGGCGTTTGGATAAGCGCGTAGTTCCACTGTTTCAAGAGGAAGACCAACAGCAGAGGGTGCTGGTGGGGCTGatggtGGACAAACTCAGAGAGCACTTAAACAGACATTTATCACGACTGGGGAAGAAAAAGATCGATTTGCTAGTGGTGAATTACGCTGCGAAGCTGCTGGAGCTGGTCTGGCATGTGCTGGAATTGATGTGGCAGAAGCTGAAGTTGGGCCCCTGGGTGCTCTGCATTAAGCAGCAGGGTAGTTCAGAAGAGTGGGCGATGTTTCATGTGATGTTTCGCATTCTGGAAGCAACTAAAGGGCTCTGTCTCCCCCTCCCTCCAGGTTATTCCACACTGTTAAGTGTGCTTGGAGTTCGATGTCTCCCACAGCACACTTTTCTCCAGTATGTGGACCATGGCCTTCTTCAGCTCACAGAACCATTTGTTTCACGACTCATGACAGATTTAGATAATAGTGATGCCAATGAGCAGTTGAAGTTCAGTATTCTGAAAAGACTTCCTGAGCATATGGAGCGGAAAGTTAGCCAGCAGTGGGATCACCCCATCACTTCTGCATGCATCTCCAGAGAATACGTCAAGACTCTGCTGGAAAAAAACTTAGACAACACGGACTCTGCACTTTTGGACTATGGCAAGTCATGTTTCTATCGTGATTTTCTACCCCTAAACTACCTCGCCAAGACTCTTTCAAACAGAGAGGAACAAGCTCAGAGCCCTTTTGAAGAACAGGAGAATGTGGATGTCAGGTTTGTGGAGGAGATAGCCCTAAAGCAGACACAGATCAAGCTGGGCTTtgaagtaaagtaaaaaaaagtctgctaCAAACACTAAAGTGGTAAAAAGGGAAACATGGAACATATTCCCGAGAAATTAGAGGAAAACGGTTCTCTTGACCAAAAAACTAAGCTTGATGTTTTCAGGTGACTGTAGTAATTTACAGAAGTTTTAATGTTAGCCATAACTTAGTAGAAACTGAAGCCCAAATTCAATCTGTTGACCAAAGATTATTTGCCAACTGTCAATCTGCCCTTTAAATATCCCATTATAGTACCCAGATGGACATGTACTGACTCTACTGATGCCAGTACGTATGGGGAATATTACACACTTTTCTATACACACAGATGCCATGGACGAGCAccaacaaaaaaagacacataaaGGGATTTCTTTTCCTCCCAGATGTTATATGGGGTCAAATGggtacatttgtaaatatttcacaaacaaaaaataaaaaaatcatatattgtT

Function

symbol description
gsap Predicted to be involved in positive regulation of amyloid-beta formation. Predicted to be active in trans-Golgi network. Orthologous to human GSAP (gamma-secretase activating protein).

NR:

description
PREDICTED: gamma-secretase-activating protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236582.1 True 3467 mRNA 0.48 33 10463761 10476981

Neighbor

gene id symbol gene type direction distance location
fgl2a fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052 coding downstream 11954 10448839 ~ 10451807 (-)
LOC122342631 NA coding downstream 15397 10446645 ~ 10448364 (-)
lrrc17 lrrc17,LOC107738820,LOC107694168,LOC107591338,LOC107699038,LOC107557290 coding downstream 30266 10423932 ~ 10433495 (-)
cep83 LOC107694167,LOC107738819,LOC107591083,LOC107699054 coding downstream 42600 10414195 ~ 10421161 (-)
si:dkey-159a18.1 LOC107694153,LOC107591329,LOC107738834,LOC107699055 coding downstream 50026 10404599 ~ 10413735 (-)
stk38l stk38l,LOC107738822,LOC107590537,LOC107694172,LOC107699048 coding upstream 232 10477213 ~ 10484101 (-)
napepld napepld,LOC107738826,LOC107694176 coding upstream 160802 10637783 ~ 10645759 (-)
ints13 asun,LOC107590623,LOC107738827,LOC107589038,LOC107733003 coding upstream 199496 10676477 ~ 10685951 (-)
pawr pawr,LOC107694180,LOC107591114,LOC107755907,LOC107734443,LOC107680012 coding upstream 688287 11165268 ~ 11213298 (-)
ppp1r12a ppp1r12a,LOC107749073,LOC107755884,LOC107694147,LOC107680011 coding upstream 743555 11220536 ~ 11275588 (-)
G27883 NA non-coding downstream 73956 10389447 ~ 10389805 (-)
LOC122343524 NA non-coding downstream 114470 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 325705 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 448007 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 718974 9697696 ~ 9744787 (-)
G27910 NA non-coding upstream 172917 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 237649 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 453616 10930597 ~ 10932401 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding upstream 649521 11126502 ~ 11259483 (-)
LOC122343274 NA non-coding upstream 1141469 11618450 ~ 11648423 (-)
zgc:193726 NA other downstream 100195 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1163582 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1454457 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1522358 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1589163 8870215 ~ 8874598 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 7941 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 47550 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 937739 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1176489 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1364984 11841965 ~ 11996639 (-)

Expression


Co-expression Network