fgl2a (fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052)


Basic Information

Item Value
gene id fgl2a
gene name fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 10448839 ~ 10451807 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236585.1
tATTAATGGCAATGCTGTTGCACTTTGAGGCAGATCTCGTCAgttctctctctcagtttgGATCACTGTATTTGAGAACATGAAACTAGTGTACGTGTGCTGTTCTCTGCTGATAGCCGTCCAGCAGGAGGTCGAGGCTTCTGGTAGTGGCCCCTCCGGGGTTCTGGACAGGGGGTCAGGAGGCTCCAGCTGCTCCCAGGTGAGATTGAAGCCAGCTGGGCAATGTGAAGATGAGGAAGAGTGCCCTTACCAGATCACGCTGCCACCACTCACTATCCAGCTCCCCAAACAATTCAGACTACTGGAGAAGACCATGAAGGAACTGCAAAGCTTGAAGGAGACAGTAAACAGGTTGAAAAGCTCCTGTCTGGAGTGCAGCTCACAGCAAGTGGACCTTAACTTGCAGAAGGACAGCGGAGACCCTCCAACAAACAGCGCAGAGCAGAATCGAGGGGATACCAGCACCAGAGTCTACCGGAATGGGAACAACAGTGATAATGACATTGTACAGAACATGCAGGTGAAGATGAATCGcatgtctgtgagcctgaagaATGCACGCGCACAAATTAACTCCCTTCAGGGCCGTCTGGAGGAACTTAACCTCCTCAATCTGCAAAATGTGGAGGATATAGTGGACAGAAAAGTTGAGAACATTACCGGGATTGTCAACAAAATCAGCAGCACTTGCACAAATTGTCCAggtcaacaacaacaacttcaGCACCTCACAAACATCACTCCCAGAGACTGCTCTGACATCAGCACACTGGGGCAGAGGAAAAATGGGGTGTATCAGGTGACCCCCGATCCCAGAAACGGCAGCTTTGCGGTGTACTGTGACATGGAGGAATACGGTGGTGGCTGGACCGTCTTTCAGCGGCGCATCAATGGCAGCGTGAGCTTCAACCGCACATGGGCTGACTACAAGAAGGGCTTTGGTGACCCTAAAGGCGAGTTCTGGCTTGGCAATGACAAAATCCACCTGCTCACCAAAACCAAGGACATGATCCTGCGCATTGAGCTCGAAGATTTCGAGGGCACACGTGGGTATGCGAAGTACGAACAGTTCTACGTATCCAATGAGTTCCTCTATTATCGGCTGTCTTTGAGCGGGTACTCGGGGACTGCCGGAAACGCTCTGCAGTTTAGCAAACACTTCAACCATGATCAGAAGTTCTTCACTACACCTGACAAGGACAATGACAGGTACCCCTCAGGGAACTGTGGAGCGTACTACGGATCGGGCTGGTGGTTTGATGCTTGTATGTCTGCAAACCTCAATGGCAAATACTACAAATCAAAGTACAAAGGGAAGAGGGATGGGATCTACTGGGGCACGTGGCACAACCTGACTTCTGAGTACTATCCGACAAACTacagacaaacatttaaaaatgtcaaaatgatgaTAAGGCCAAAGAATTATGCACCCTAAGGCAAATGAAGCATAAACGAACAATTACCTTTTGGGCAGTATCGCACTTTTCCGCAAGAACTTATAAAGATATATCTTGTGATTCATTACAAATCTTCAAATGGTAacataacagaattttttttttaaatgtataaatttgtattttcaaGGCACATAAAAATGCTATCCATCAATGTACCAGATCTTGTAATGTTCTCATGTTTTCCTGTATGTGCTACTGCCATCTTGTGTTTAACTGTTTTACTACACCATCCTCTTTACAGCCTCCTGATGTTTTTCCCTGTTCATGTATTAAGCGGGACACactgaaaagcttttttaaaattgcttattttaaaacaattgattTATACCATCATTAATTTGCtggttgacttttttttaatgaaaatttaaatatatactttttaccgatgatttttttactctaatgtttaaacacagaaatacaAACATGGTTTCTTAAGGCCCATACGAAACTATACTTTATCTGTGACATTCAAGGaagaaatgtacagtatttattttgaaaagcaaaacactttttttattattattattttattgctgtgTGACtaggcagttttttttcttaccagtCTGaaattattgtgttttgttttttctaatcATTATTAGCCAATGTTTTCAAAAACTGTTTGTGTATTGGAGTATTAGAGAAATTGCACCAAACGCCTCAAATTGTGGTTTTAAAGGTACATTgataattttataaaacaaataaaactccATCTAAAAGTTGA

Function

symbol description
fgl2a Predicted to enable signaling receptor binding activity. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human FGL2 (fibrinogen like 2).

NR:

description
fibroleukin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236585.1 True 2205 mRNA 0.42 2 10448839 10451807

Neighbor

gene id symbol gene type direction distance location
LOC122342631 NA coding downstream 475 10446645 ~ 10448364 (-)
lrrc17 lrrc17,LOC107738820,LOC107694168,LOC107591338,LOC107699038,LOC107557290 coding downstream 15344 10423932 ~ 10433495 (-)
cep83 LOC107694167,LOC107738819,LOC107591083,LOC107699054 coding downstream 27678 10414195 ~ 10421161 (-)
si:dkey-159a18.1 LOC107694153,LOC107591329,LOC107738834,LOC107699055 coding downstream 35104 10404599 ~ 10413735 (-)
fam3c fam3c,LOC107738818,LOC107694166,LOC107699057,LOC107733009 coding downstream 45081 10398091 ~ 10403758 (-)
LOC122342626 gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096 coding upstream 11954 10463761 ~ 10476981 (-)
stk38l stk38l,LOC107738822,LOC107590537,LOC107694172,LOC107699048 coding upstream 25406 10477213 ~ 10484101 (-)
napepld napepld,LOC107738826,LOC107694176 coding upstream 185976 10637783 ~ 10645759 (-)
ints13 asun,LOC107590623,LOC107738827,LOC107589038,LOC107733003 coding upstream 224670 10676477 ~ 10685951 (-)
pawr pawr,LOC107694180,LOC107591114,LOC107755907,LOC107734443,LOC107680012 coding upstream 713461 11165268 ~ 11213298 (-)
G27883 NA non-coding downstream 59034 10389447 ~ 10389805 (-)
LOC122343524 NA non-coding downstream 99548 10322734 ~ 10349291 (-)
G27628 lrrc4.1,LOC107557314,LOC107732976,LOC107699068,LOC107738809,LOC108432552 non-coding downstream 310783 10083419 ~ 10138056 (-)
G27627 NA non-coding downstream 433085 10015182 ~ 10015754 (-)
G27581 NA non-coding downstream 704052 9697696 ~ 9744787 (-)
G27910 NA non-coding upstream 198091 10649898 ~ 10659974 (-)
G27940 NA non-coding upstream 262823 10714630 ~ 10720284 (-)
LOC122342624 LOC107694146 non-coding upstream 478790 10930597 ~ 10932401 (-)
G27974 syt1a,LOC107590640,LOC107694178,LOC107734425 non-coding upstream 674695 11126502 ~ 11259483 (-)
LOC122343274 NA non-coding upstream 1166643 11618450 ~ 11648423 (-)
zgc:193726 NA other downstream 85273 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1148660 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 1439535 9004260 ~ 9009304 (-)
LOC122343470 LOC107593478,LOC107664836,LOC107744937,LOC108435459,LOC108279443 other downstream 1507436 8892019 ~ 8941403 (-)
th2 pah,th2,LOC107590157,LOC107664872,LOC107587609,LOC107744916,LOC107695848,LOC108437952 other downstream 1574241 8870215 ~ 8874598 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other upstream 33115 10484922 ~ 10522249 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other upstream 72724 10524531 ~ 10533543 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 962913 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 1201663 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 1390158 11841965 ~ 11996639 (-)

Expression


Co-expression Network