CI01000004_09173580_09175411


Basic Information

Item Value
gene id CI01000004_09173580_09175411
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9171752 ~ 9175657 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_09173580_09175411.mRNA
ATATAAAAATTCAGTGTCACTTATATAACACACTTTTACGGTGCAGTGCAGCTTTGTAGTTCTTGGTAGCAGCTCTTAAGCTGGAGGTTGTAGGTTCAAACCCCAGATGGGGCCATTCATGAGCCACTGCCATTGTGCTCTTGAGCAAAGCGCTTAACCAACCCCAGGGTGAGTTTCACACAGTACAAAAGTTCCATAAGTCACAGTGGATTAGAATGTGACTGGTAAATGAAGAATAATATAATAATGTAACATACCTGTGATATATGATGATGATAAACTGTGGGTCAATGGCATGATGCTCATTATTTTTTGTCAGGAACTATTAATTTATTTAAAAACATTAAAATGCAATTCATATGCAATTCCTGTTTCATCACTTCTATGAATTCTACGAATTTCAATGATTTTTTTAAGTAAAAAATTGTACAACTATATCTTATATATATATATATATATATATATACAGTAGTCAACATTTGAAGTGGATCAAAACCTTTCACCAAAGTTGTCCTAAAACCTTCTTCTTAGGACAATTTAGTTCTTAGGACAACTTTGATGAATTTTTTGATCCACTTCAAATGTTGATTACTATATATATATATACATACACACACACACACACACACACACAACACACACACACATATATATAAAGCGTCATTAAAATAATTAAATTCTTGAAAAGAAAACATTAAACTTTAAACTTCTAGTTTGGCATACATAATCTTTTTTTAGCATTTCTTTAAAAATGAGCAAAAATGCTTCTCTGCTTATTAATATTTATTAGTAAGATAATTTGACCTTTTTATGACAAGGCAATGTTAGTTAAGATTGTAAAATGTCATGTGGTGTTAATAATTCATTGTTTTTGTTAAAAAAAAAAAAAAACCTTTTGCCATAAAATATATTTTAAAACCTTTTTTAAAAATGACTTATTTTAGGAAAATATTATTACATTTTTTGCTTGATTGACCGCATGACATTATTAATATTAATTGAGCATTAAAATTAAAATGTTTAATTTATTAATTCAGTATTAAATTAAAACTTTTTTCTTGAAAATGGTTAAAAAAGCCATATAAAATGGTTTCAAAACTATATGAAACCATTCTGAATATAGAGTACATGTGTTTTCAACTTGTTTGACATTGACCCATTTGCTGTCTTGCATAAGACAAGTATGCTAATGGAGCAACTCACTCCTTTGTTAGGACTTGAGATGGTACATATTTGCTTGATTTCTCCAAACCTTTGCATTGGAGCTCTATCCCTCTCCCTCTGTCTGTTTCCCCCTCCCTCCCCGGTTCCCTTCAGCCCTAAAGATTAATGTGCTCCACTTTCAGCAGTGCTGTCAAATACTCATCCAGAGGAAAGAGCTGAATGTCCGTTTTGCTCACCTGTAGTGGTCTGCCTGCACCTGCATCACAGACGGCAAGCTCTGAAATGCCAAAAGTCATGTTGTCTTAATCTGGGGTTCAAATGTGAAGTGGTATTGTAAAAATGATGGTAAATCAAGTCTGTATTTGTGCTGACAGACTCTCAATTTCTTTGACTCTTTTCTCTCACTCTGATTTTCTTCAACCTCTCCCCCTGATGTCTGTTCTCACCACAGGTTTGAGAGCTTCAACTACAATCATCGTTCATTCCTGTGGTCTCTCCCATCAATCACCGGTCAGACGGTCTCTATCCCCCTACCCGTGCCAGTGCTGAGGGTGGCGCACAGTTTCCCAGGAGCAACATCTTAGCCTCAAGATCTCTGGTGCCCGTTCAATACGGAGGAGTGTACTTTTTTGTTTCCTTTTTTTACGTTCATCCTTTCATCCAAATGATGCAGATAGGCTCTGCAGTGTGGACTGGACTGACTTTAATGACTATGCTGCTGTTGGCCCAGTGGGATGTGGGCTGCTGGGGTATGACTCTGAACTCTGTCCCGCTCCGCCCGGCTTCCCTGAAGCCCATCAGCGCTAGTCTGGGTGCATCCCTTCAAAGACACAAGCGCAACTGGGTGTGGAACCAATTCTTCGTCCTGGAGGAATACACAGGAGATGACCCTCTCTATGTTGGCAAGCCGCACATGATCGCTATTTCTGCTAAACATGTGATGCTAATTAAACATGACTAGCTAGCTATTGTGCATAGACTTGGCATACACAGGCCTCTTAAGACAGACTCTTGCTTAAAATGAACACAAGTAGAAGAGTTTTGTGAGTAAGTTTCATTTTTAAAGGAGTGCTACGAAACTCTAACAGAACTCAAATATTACTATTTAGTTAAAAAAAAGCATTTACTGAAACTGGAACAGTAGAAAAGCTGCAAAAGCGGCTTGTTGAATGCATCAAAACATCAGAGAGAGTGAGAAAAAATGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_09173580_09175411.mRNA True 2371 mRNA 0.37 2 9171752 9175657

Neighbor

gene id symbol gene type direction distance location
CI01000004_09002274_09004879 IMPA1, IMPA1.3 coding upstream 166729 9002042 ~ 9005023 (+)
CI01000004_08996083_08997863 NA coding upstream 173889 8996083 ~ 8997863 (+)
CI01000004_08987501_08991239 NA coding upstream 180283 8987158 ~ 8991469 (+)
CI01000004_08976512_08980033 TTPA coding upstream 190794 8976254 ~ 8980984 (+)
CI01000004_08947119_08949558 NA coding upstream 222108 8947119 ~ 8949644 (+)
CI01000004_09185502_09218621 NA coding downstream 9178 9184835 ~ 9218642 (+)
CI01000004_09224465_09224950 NA coding downstream 46822 9222479 ~ 9224956 (+)
CI01000004_09340611_09363638 TESK2 coding downstream 163883 9339540 ~ 9364254 (+)
CI01000004_09371639_09375356 NA coding downstream 195982 9371639 ~ 9376005 (+)
CI01000004_09378220_09381425 NA coding downstream 202147 9377804 ~ 9381823 (+)
G29010 NA non-coding upstream 129506 9041084 ~ 9042246 (+)
G28999 NA non-coding upstream 147500 9024052 ~ 9024252 (+)
G28994 NA non-coding upstream 150691 9017805 ~ 9021061 (+)
G28992 NA non-coding upstream 188049 8983490 ~ 8983703 (+)
G28989 NA non-coding upstream 198114 8971829 ~ 8973638 (+)
G28980 NA non-coding downstream 33450 9209107 ~ 9211614 (+)
G30120 NA non-coding downstream 121599 9297256 ~ 9297656 (+)
G30129 NA non-coding downstream 132503 9308160 ~ 9309854 (+)
G30130 NA non-coding downstream 134702 9310359 ~ 9310561 (+)
G30131 NA non-coding downstream 134940 9310597 ~ 9310821 (+)
G28859 NA other upstream 572149 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 720525 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1515369 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2597331 6570771 ~ 6572667 (+)
G30797 NA other downstream 1321719 10497376 ~ 10497788 (+)
G31710 NA other downstream 2461594 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2489116 11666900 ~ 11667659 (+)
G31865 NA other downstream 3016473 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 3467097 12646838 ~ 12652570 (+)

Expression


Co-expression Network