LOC122342640 (cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034)


Basic Information

Item Value
gene id LOC122342640
gene name cerk,LOC107689729,LOC107552286,LOC107710741,LOC107600034
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 14704793 ~ 14725207 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236609.1
CTTTATCAGGAAGAAGAAAACCGCTATGTAGCCAAACTGCTTAGGAGAAACGAGCAACGTTTTAGCGactgtagtatttttattaaagaaaaattaaagcGTCGGGGCGATATAGTATAAACTCGATTTGAATATGAAAGTGAGATAACTAGCGTGTATTTGTTGTTAAGAGCAGAAATGGAGAAGCAGTCGCGTCTGTTGTGTTCTGAGCTGTGCGTTCAGCGCAGACCGTATGAGGTTACGTTAAACTGCGCGATTCTCGCGTGGAAAGACAGACAAATCGCCAAAAAACACACCGGACGCGCCATATATGGAGCTGTCAAAGCGGGTAGTCACTGCGTCCCGGTGTGCGAGATTATAGCCGTTCAGGAAAAGGAAGATGACTCTCCTTGCAAAGACACTGGAAAATGGCAGAAGGTCCCTCAGAGCCCAGCAGACTCCTGCCAGCACGCTTTCACAGTGTACTATGTAGAGAGGACGAGGCAGCGCTGCTGGCGGTGCAGCAACGTGACTTTCCACTGCTCTGAACATTCCCTGTGTCTGCTCTGGGTCCAAACTATAAGGGAACAACTTGCACTGCTGACCAATCGACCGAAGAGCTTGCTAGTGTACATCAACCCCTACGGAGGAAAACAACGTGGGAAGCAGATTTACGACCACAAAGTGGCCCCCATCTTTTCCCGGGCTTCCATTTCCACCGACGTGATTGTTACGGAGCGCACAAATCATGCCAGAGACCACTTGAAGACAGAGGCTGATCTGAAGAAGTATGATGGtgTGGTGTGTGTCGGAGGTGATGGCATGTTCAGCGAGATTATGCATGGCCTCGTCTCCCGTACGCAGCAAGAAGCAGGTGTGGATGAGAACTCCGTGGAGGAGACCCTTATGCCGTGTGGGGTTCGCATCGGCATCATTCCTGCGGGTTCGACCGACTGTATATGCTACGCCACAGTTGGCTCAAATGACCCCGTCACCTCAGCACTGCATATCATCGTGGCGCCTAGCACGGGGTCCCGACGGCATCAGCAATGCATCCTGGCTTTTTCTACAGGTGATTCTCAGCCAATGGACCTCTGCTCGGTGCACAACGAAGACGGCTTCCTGCGCTACTCTGTCTCACTGCTGGGTTACGGGTTCTACGGAGATGTGTTGACCGACAGCGAGAGGAAGCGCTGGATGGGCCCTGCCCGTTATGATATCTCAGgtgttaaaacatttttgtcacacCGCTACTATGAGGGAACGGTGTCTTTCTTACCTGCTGAAGGGAACTTGGGAACTCCTAGAGACAAAATGCAGTGCCGAACTGGATGTAGTGTCTGTCGGCAATCCTCTTCTGACAAGCTGGTCAGCAAAAATGAAGACAGCGTTTCCGATGCTGAGTGTCAGGACACTTGGACCGTCATCAGGGGAAAGTTCTTGGCCATCAATGCCGCCAGCATGAGTTGCGCGTGTCCTCGAACTCCTAAAGGCCTGTCGCCGTCGGCGCACTTAGCAGATGGAACAACTGACCTCATCCTCGTCAGGAAGTGCTCCCGACTCGACTTCCTGCGCCACCTGCTGCGCCACACCAATAAGGACGACCAGTTTGATCATTCATTTGTGGAGGTGTACCGGGTCAGGCGGTTCCGATTCGCCCCCAGATATCAGGAGTGTGATTCTGAAGTGGACCTGAGAGAAAGCGGAGCGACGGGCAAGCGATTTCTGAGTCAGATCTGCAGGGAGCACAGAGCCTGTGGCTGCATGCCGTCCCAGAGCAACTGGAATTGCGACGGCGAGATCCTCCCACACACTGCCATTCAAGTCCGGGTCCACTGCCAGTTAATCAAGCTGTTTGCGAGAGGCATCGAAGAGCAGCCTGTGTTTGAGGACCCGTACGCTCACTGTGCAATATAGATCTCTactccacttaaaaaaaaaaaagaaaatccagcTGGATCATTAAGGATTGAGATTCTCCGAATGGAAGAGTCACCTTCAGCTCAGCACACCGTCGTGCTGTTTCTTATATAACCCTCGTGAAGATGCGTTGAAAACGCGAAGCTGGAGTCAACCGCATTTATGTAGGCTGCGTTAGAGTTGTGTAAGATAGGATCAGCTGTTTCGGCTAGGCATTAGCATTGCTGATTTTTCATTGCAAGTCCTTGAAGTTGCTGGCGGTATCTCTTGCTTGCAACTTCCAGTTGTCGGCGTTTGTCTTCCACCACGATCAAGCTGGTCTTGAGAGTAGCGTTAATTGAATTCCAAAGTCAGATTCCTGGAACTGTGAAAACTCTGGCGTGTTGATGAAAACATTCCTCTTGGCTGCAccttcactgttttttttttttgtaaagcacaTGAGGTGGTCACCTGATGAAGTTATCGGTATCCAAAAAAGTTTGTGGGTTAAGTAGGTCGTTCAAAAATTGAAGCTTGTTAACAAATTTGAGTTAAATTCTTCTGTTAAAcataaaagttatatattttgaaggatGTTGGTAACCGAACAGTAGCTGGTTGCCATTGATTTCCGTAGTGTGTGGGAAAAATACGATAAAAGTCACTTcctcaactattcctttaaaaaggtAGCATGAAAAAAGTAACGTATGGCATATAGACAGTGAAGCCTGCATTGAGTAACATTTACACGTGAGCTGTACATATTATGCAAATGGCACTTCAGATCAGTGTAAATCCTGTAAAAACGTACCCCTTTGACCAATTCTAATGTATCATTTCCCACTCTTATCACGGTCGGTTTTGTTTTCCCGACATTTCGCGCATGGAAATGCAGTATTAGTGAGCTAGACGCTGACAGCTACACGGTGTCACTGCAGGGTCAGTGTACGTACGGCTGTTCATCAGGCGGAATGTAAATACTGTAGCGTTCTTTTCTGTGTCGTCTTCTTTGGCGGCACCCCCCGAGAATATTTCCTCCcttttataatgaatttttgCGTTTGCGTTTCTTATGCTGATGTCTTATTTCTCACGAAAGCTCTTATTGTTCCTGCGGTATCGAAGAATGAAGGAGTTTATGATAGACAGAGAAATTGCATATCGCTTGTTGTGCATGTCAGCTgctttaatatgcaatttttaaaatgtttctttgagCTGTGCTTGTTATTGAGGGCGTGGATTTCCCATGATGCATCTGAAGAAGCAACACAACTTCTGGAGCCGTTACAGGGAAAACATTGTTTGTGTCTTTCAGAGACTGAAAGATTGCAGGGAAGCTCATTTttaccacataaaaaaaatgctttggtaaattataattatgtcATAATTGGGTCATTAGCTgttattaaaaactgaaataaaaaaattaaaatgcaaaaat
>XM_043236610.1
CTTTATCAGGAAGAAGAAAACCGCTATGTAGCCAAACTGCTTAGGAGAAACGAGCAACGTTTTAGCGactgtagtatttttattaaagaaaaattaaagcGTCGGGGCGATATAGTATAAACTCGATTTGAATATGAAAGTGAGATAACTAGCGTGTATTTGTTGTTAAGAGCAGAAATGGAGAAGCAGTCGCGTCTGTTGTGTTCTGAGCTGTGCGTTCAGCGCAGACCGTATGAGGTTACGTTAAACTGCGCGATTCTCGCGTGGAAAGACAGACAAATCGCCAAAAAACACACCGGACGCGCCATATATGGAGCTGTCAAAGCGGGTAGTCACTGCGTCCCGGTGTGCGAGATTATAGCCGTTCAGGAAAAGGAAGATGACTCTCCTTGCAAAGACACTGGAAAATGGCAGAAGGTCCCTCAGAGCCCAGCAGACTCCTGCCAGCACGCTTTCACAGTGTACTATGTAGAGAGGACGAGGCAGCGCTGCTGGCGGTGCAGCAACGTGACTTTCCACTGCTCTGAACATTCCCTGTGTCTGCTCTGGGTCCAAACTATAAGGGAACAACTTGCACTGCTGACCAATCGACCGAAGAGCTTGCTAGTGTACATCAACCCCTACGGAGGAAAACAACGTGGGAAGCAGATTTACGACCACAAAGTGGCCCCCATCTTTTCCCGGGCTTCCATTTCCACCGACGTGATTGTTACGGAGCGCACAAATCATGCCAGAGACCACTTGAAGACAGAGGCTGATCTGAAGAAGTATGATGGtgTGGTGTGTGTCGGAGGTGATGGCATGTTCAGCGAGATTATGCATGGCCTCGTCTCCCGTACGCAGCAAGAAGCAGGTGTGGATGAGAACTCCGTGGAGGAGACCCTTATGCCGTGTGGGGTTCGCATCGGCATCATTCCTGCGGGTTCGACCGACTGTATATGCTACGCCACAGTTGGCTCAAATGACCCCGTCACCTCAGCACTGCATATCATCGTGGGTGATTCTCAGCCAATGGACCTCTGCTCGGTGCACAACGAAGACGGCTTCCTGCGCTACTCTGTCTCACTGCTGGGTTACGGGTTCTACGGAGATGTGTTGACCGACAGCGAGAGGAAGCGCTGGATGGGCCCTGCCCGTTATGATATCTCAGgtgttaaaacatttttgtcacacCGCTACTATGAGGGAACGGTGTCTTTCTTACCTGCTGAAGGGAACTTGGGAACTCCTAGAGACAAAATGCAGTGCCGAACTGGATGTAGTGTCTGTCGGCAATCCTCTTCTGACAAGCTGGTCAGCAAAAATGAAGACAGCGTTTCCGATGCTGAGTGTCAGGACACTTGGACCGTCATCAGGGGAAAGTTCTTGGCCATCAATGCCGCCAGCATGAGTTGCGCGTGTCCTCGAACTCCTAAAGGCCTGTCGCCGTCGGCGCACTTAGCAGATGGAACAACTGACCTCATCCTCGTCAGGAAGTGCTCCCGACTCGACTTCCTGCGCCACCTGCTGCGCCACACCAATAAGGACGACCAGTTTGATCATTCATTTGTGGAGGTGTACCGGGTCAGGCGGTTCCGATTCGCCCCCAGATATCAGGAGTGTGATTCTGAAGTGGACCTGAGAGAAAGCGGAGCGACGGGCAAGCGATTTCTGAGTCAGATCTGCAGGGAGCACAGAGCCTGTGGCTGCATGCCGTCCCAGAGCAACTGGAATTGCGACGGCGAGATCCTCCCACACACTGCCATTCAAGTCCGGGTCCACTGCCAGTTAATCAAGCTGTTTGCGAGAGGCATCGAAGAGCAGCCTGTGTTTGAGGACCCGTACGCTCACTGTGCAATATAGATCTCTactccacttaaaaaaaaaaaaaaaaatccagctgGATCATTAAGGATTGAGATTCTCCGAATGGAAGAGTCACCTTCAGCTCAGCACACCGTCGTGCTGTTTCTTATATAACCCTCGTGAAGATGCGTTGAAAACGCGAAGCTGGAGTCAACAGCATTTATGTAGGCTGCGTTAGATTTGTGTAAGATAGGATCAGCTGTTTCGGCTAGGCATTAGCATTGCTGATTTTTCATTGCAAGTCCTTGAAGTTGCTGGCGGTAT

Function

symbol description
cerk Predicted to enable ceramide kinase activity. Predicted to be involved in ceramide metabolic process and phosphorylation. Orthologous to human CERK (ceramide kinase).

NR:

description
PREDICTED: ceramide kinase-like

GO:

id name namespace
GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0008152 metabolic process biological_process
GO:0003951 NAD+ kinase activity molecular_function
GO:0004143 diacylglycerol kinase activity molecular_function

KEGG:

id description
K04715 CERK; ceramide kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236609.1 True 3331 mRNA 0.47 14 14704793 14725207
XM_043236610.1 False 2109 mRNA 0.51 13 14706280 14725207

Neighbor

gene id symbol gene type direction distance location
srr si:ch73-263o4.4,LOC107569226,LOC108427077,LOC107666211 coding downstream 719347 13982356 ~ 13985446 (-)
alg10 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 coding downstream 724178 13975805 ~ 13980615 (-)
LOC122342633 NA coding downstream 729163 13970264 ~ 13975630 (-)
LOC122343235 LOC107689737,LOC107716193,LOC107689255,LOC107584741,LOC107716201 coding downstream 920085 13763390 ~ 13784708 (-)
LOC122342931 LOC107689242,LOC107689241,LOC107584712,LOC107689720,LOC107597003 coding downstream 943937 13750834 ~ 13760856 (-)
LOC122342645 abcd1,LOC107743108,LOC107701814,LOC107552221,LOC107727428,LOC107674359,LOC108265308 coding upstream 85801 14811008 ~ 14822661 (-)
LOC122342646 prkcq,LOC107748461,LOC107555829,LOC107675981 coding upstream 101060 14826267 ~ 14847177 (-)
brd1a brd1,LOC107744592,LOC107563621 coding upstream 398838 15124045 ~ 15136539 (-)
alg12 alg12 coding upstream 418581 15143788 ~ 15148210 (-)
LOC122342488 LOC107744205,LOC107601002,LOC107699198,LOC107687568,LOC107562147,LOC107741716 coding upstream 830044 15555251 ~ 15588908 (-)
G28597 NA non-coding downstream 630267 13994018 ~ 14074526 (-)
LOC122342415 NA non-coding downstream 634388 14068087 ~ 14070405 (-)
G28594 NA non-coding downstream 711991 13992051 ~ 13992802 (-)
G28577 NA non-coding downstream 723629 13980790 ~ 13981164 (-)
G28570 NA non-coding downstream 822386 13882191 ~ 13882407 (-)
LOC122342647 NA non-coding upstream 86233 14811440 ~ 14825838 (-)
G28738 NA non-coding upstream 277942 15003149 ~ 15003429 (-)
LOC122342397 NA non-coding upstream 292578 15017785 ~ 15023863 (-)
G28789 NA non-coding upstream 484477 15209684 ~ 15213451 (-)
G28850 NA non-coding upstream 691649 15416856 ~ 15418238 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other downstream 171 14687873 ~ 14704622 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other downstream 528051 14155492 ~ 14176742 (-)
G28575 alg10,LOC107726832,LOC107689747,LOC107721156,LOC107666210,LOC107600015,LOC107569225 other downstream 724234 13975357 ~ 13980559 (-)
LOC122343280 NA other downstream 872942 13815574 ~ 13831851 (-)
LOC122343399 LOC107726825,LOC107689735,LOC107584742 other downstream 1006078 13692471 ~ 13698715 (-)
LOC122342642 pfkfb3 other upstream 83336 14808543 ~ 14810711 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other upstream 299380 15024587 ~ 15027663 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other upstream 876233 15601440 ~ 15611575 (-)
G28898 NA other upstream 1207287 15932494 ~ 15932864 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other upstream 1982567 16707774 ~ 16708960 (-)

Expression


Co-expression Network