daam1b (daam1b,LOC107701451,LOC107755211,LOC107718401,LOC108412077)


Basic Information

Item Value
gene id daam1b
gene name daam1b,LOC107701451,LOC107755211,LOC107718401,LOC108412077
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17488260 ~ 17552346 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236625.1
gtgggggaaaaaaaatgatgacgTCAGCTCGCTATAGGTCCGTGCAATGCTGCGATCGAGCGCGTTCATGTGTCCGCTCACCCGGCCGAAACAGTGGCGTCTGGATGAATGATGAGACCCCGTACGAGgGCTGAGTGACCCAAGCGCAGCTCTCACCTGGGGGAGGACCAACACTCCCTCGTTCCCATCATCCCTTGAGCCTCCACTCTGAAGCAGCCATGGCACCACGGAAACGTGGAGGCGGAGGGCACGGTGTGTccttcttcttctgctgcttCCAGAGCAGTGACCACCCAGAGATCACCTACCGTCTGCGGGAGGACTTCGCCCTGCAGGCCATGGAGCCGGCGTTGCCCATCCCCAGCTACGACGAGCTGGACGCCATGTTCTCAGAGCTGGTGGATGAGCTGGACCTCACAGAGAAGCACAGAGAGGCCATGTTTGCCTTACCAGCAGAAAAGAAATGGCAGATATACTGCAGCAAGAAGAAGGAACAAGAGGAGAATAAAGGTGCTACTAGCTGGCCAGAGTACTACATTGACCAGCTCAATTCAATGGCAGCTaggAAAACTTTGTTGGCCTTGGagaaggaagaagaggaggaacgCAACAAGACTATTGAAAGCCTGAAAACGGCCCTGCGGACACAACCTATGAGGTTTGTAACACGGTTCATTGATATGGACGGCCTGACATGCATCCTGAACTTCCTGAAGAGCATGGATTACGAGACCACAGAGTCTCAGATCCACACTTCCCTCATCGGCTGCATCAAGGCCCTGATGAACAACTCCCAGGGTCGCGCTCACGTGCTCTCTCACTCCGAGAGCATCAACATCATCGCTCAGAGTCTGGCCACCGAGAACATCAAGACTAAAGTGGCGGTGCTGGAGATCATGGGCGCTGTGTGTTTAGTGCCGGGAGGCCACAAGAAGATTTTGGAGGCCATGTTGCACTATCAAAAGTTCTCTTGTGAGCGCACACGGTTTCAGaCATTGCTGAATGATCTGGATAAAAGCACAGGGCGGTACAGGGACGAGGTCAGCCTGAAAACGGCGATTATGTCCTTCATTAATGCTGTTTTAAGCCAAGGAGCCGTCGAAGCCAGCCTTGAGTTCCGGGTTCATTTGCGATACGAGTTCCTCATGCTGGGGATTCAGCCCATCATCGATAAGCTCAGGTCACATGAAAACTCTACTTTAGACAGGCATTTGGATTATTTTGAGATGCTGAGAAACGATGATGAGCTCACGTTATCCAGGCGGTTTGAGTCTatccaTATAGACACGAAGAGTGCGACACAAGTTTTTGAGCTTGTACGGAAGAAGCTGGCCCACACAGATGCATATCCGCACTTTATGTCTATTCTTCATCATTGCCTGCTCATGCCTCATAAGAGAAGTGGCAACACAGTGCAGTACTGGCTGCTCCTGGACCGCATTGTCCAGCAGATGGTCCTGCAGAATGACAAAGGTCACGACCCTGATGTCACCCCATTAGAAAACTTCAATGTAAAGAATGTGGTTCGAATGCTTGTCAATGAAAATGAGGTGAAACAATGGAAGGAACAGGCGGAAAAAATGCGTAAAGACCACCATGAGCTTCAGCAGAAGCTGGAGAAGAAGGAGCGGGAATGTGACGCAAAAACTCAGGAGAAGGAGGAGATGATGCAGACGCTCAACAAGATGAAAGAGAAGTTAGAAAGAGAAATGGGGGAACATAAACTAGTCAAGCAGCAGGTGGTGGACATGACTTCTAGATTACACGACCTCAGCACGAGACAAATAGCCAGTGTTCCTGGGGGTCCCCCCATCCCTGGGCCTCCTGGTGGCCCTCTCTTGccccctccacctcctccacctccaccgGGTGGCATGATgcctcctccaccacctcctccgCCGGGCAGCGCCATGATGCCCccacctccaccacctcccCTGGTGGCCCCGCCTCCCCCTGGACGCCCTCCTTTCGGTGCAGCTCCGCCTCCTCCAGGAGCTCCTCTGGGACCCTccctgaagaagaaaaacattccTCAACCGTCCAATCCACTCAAGTCCTTCAACTGGGCCAAGCTGTCTGAGAACAAGCTTGAGGGAACAGTCTGGGCAGACATCGATGACTGCAAAGTTTTCAAAATCCTAGACTTGGTGGACATTGAGAAGACTTTCTCTGCCTATCAGAGGCAACAGGACTTCTTTATGGTCAATAACTGCAAGCAGAAAGAGACTGAAGATGATGCTCTGAGCTCAAAGAAAGTCAAAGAGCTCTCTGTCATCGACGGCCGCCGGGCTCAGAACTGCAACATCCTTCTCTCACGATTGAAACTTTCCAATGAGGAAATAAAGAGGGCTATTCTGACTATGGACGAACAGGAAGATCTGCCCAAGGACATGCTGGAGCAGATGCTCAAGTTTATCCCGGAGAAGTGTGACGTGGACCTCCTAGAGGAGCACAAACATGAGTTGGACCGCATGGCAAAGGCAGACCGTTTCCTTTATGAAATGAGCAGAATAAACCATTACCAGCAGAGATTGCAGTCTTTGTACTTCAAAAAGAAGTTTGCTGAGAGGATTGCAGAAATTAAACCTAAAGTTGAAGCGCTGTCCAAGGCCTCAAAAGAGGTGCTGCACAGCAGAAATCTCAAGCAGCTGCTGGAGGTGGTGCTGGCATTCGGCAACTACATGAACAAAGGACAGAGAGGCAACGCTTACGGCTTCAAAATCTCCTCACTCAACAAGATTGCAGACACCAAGTCCAGCATCGACAAGAACATCACTCTCCTACACTACCTGATTACCATTTTGGAGAAGAAGTACTCCAAAGTCATGATCTTCTCCGAGGAGCTGCAGAACGTGCCTGAAGCTGCAAAAGTAAACATGACTGAACTGGAGAAGGAGATCAATCACCTTCGCAGTGGCTTGAGGAGCGTAGAGAGCGAGCTAGAATTCCAGAAGAAGCGTCCTCAGGAGTACGGAGATAAGTTTGTGTCGGTGGTCAGCCAGTTCATCACAGTGGCTAGTTTCAGCTTCTCTGATGTCGAGGACTCCCTCAGCGAGGCCAAAGAACTGTTCTTCAAGGCCGTCAAGCACTTTGGTGAAGAAGCTGATAAGATGCAGCCTGATGAGTTCTTTGGGATATTCGACCAGTTCTTGCAGTCCTTCTCCGAGGCCCGTCAAGAGAACGAGAACATGCGCCGACGCAAAGAAGAGGAGGAGCGCAGGGCACGAATGGAGGCTCAGCTCAAGGAgcagagggagaaagagaagaaggcTCGAAAAGCCAAAGAGAACGGAGAGGACGACGGGGGCGAGTTTGACGACCTGGTGTCGGCTTTGCGTTCTGGAGAGGTTTTTGATAAAGATCTGTCGAAGATGAAGCGCAATCGCAAACGCATCAACAGCCAGACGTCAGACACCGGCAGGGAGCGTCCAATTACCAAGCTTAACTTCTGAACGGCGGTCAAGCAGACCAACCACTGAGACTCATTTCATTACAACCAAACAACCTCCCCGTGGTGGTGAATGTCTGGAAGACACTCATTATCTCCTCTCCTCAGATTAAACTCAACCCCGGGTAGCGGAGGAAAGCATGTTTACCCAAAGACGGTCAGCTCATCATGCGTCATGTGACTGTAATGGGAAGCCTGTCTAAGTGCAGAGAGAAAAGACTCTCAAAAAAATTAAGAGTACGGCTGCCAAATGAATCTAATTTAATGATTTGCTTTATCAAGAGTGCTGGAGCACCAGGATATTATCAGAGATTGAGATAACTGGGTTTGCTGATTGGATATGAATCAGAAACTCAGCCTCATTTGTTCACTTGTCAACCCCATTTTTTCTTACTGTAACCAAACAAATGGCCAAAAAATGAGTCTTGGCATGCTAAAGCGTCACTCATCTGAACTCCTCCGTTTCTTGCTTTTCTGACCGATTCAAAATGGGAATAGGTGTTATTTAAAGATTCAATGACAAGTGTCTGTACATAGGTCActgaaaaaaagctgtaaaGTGACTGTACACCTTTAAGAAAAGGATTTTGCCCTTTTgacaaaaggtgttttttttttttttttttttttttatacatatagagtgttttaaaggaatattacTGACATTAATAACCAGGGCTGTGGGATGCTTTTTCAGAAAGAAGACTGCATTGTGATATCCGGTACAGGCAgactgggaatgatttttttaaaaggtgtgTTTTTAGGGGCCTCTGGAGCCCATGTTGTCTTAAACACTGTGGACGGTCATTGTACAGACTCTATGCAGTTTCTGATGTCAAGTGTTGGTCTCACTGTTTGAGGAGTTTTCATGTGAAATGTactcatatttaaaatgatctgtAAGTAACTGGATCAAAGCAATACTCTTCTTCCCTTAcgttcttccttttttttttttttttttatcagcagcCTAGTCGTATGGTGTAACAAAGTTTCCTTTTCAGTGTAAGTTTCCTCCATTGGACTTTTATAATTTAAGGAAAACACAACCTTCCATTGTAAGATGAATCATAAGAGAATAAATAGAAGAATCTGA

Function

symbol description
daam1b Predicted to enable actin binding activity. Acts upstream of or within convergent extension. Predicted to be active in stress fiber. Is expressed in axis; notochord; and polster. Orthologous to human DAAM1 (dishevelled associated activator of morphogenesis 1).

NR:

description
PREDICTED: disheveled-associated activator of morphogenesis 1-like

GO:

id name namespace
GO:0030036 actin cytoskeleton organization biological_process
GO:0060026 convergent extension biological_process
GO:0003779 actin binding molecular_function

KEGG:

id description
K04512 DAAM; dishevelled associated activator of morphogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236625.1 True 4559 mRNA 0.48 27 17488260 17552346

Neighbor

gene id symbol gene type direction distance location
LOC122343418 LOC107683962,LOC107701452,LOC107755208,LOC107601897,LOC107568118,LOC107718425 coding downstream 5505 17411018 ~ 17482755 (-)
btbd6b btbd6b,LOC107589075,LOC107755235,LOC107718408,LOC107560384,LOC107701487,LOC107683969 coding downstream 344980 17138065 ~ 17143280 (-)
LOC122342663 NA coding downstream 357995 17123907 ~ 17130265 (-)
ckbb ckb,ckbb,LOC107560383,LOC107755234,LOC101477834 coding downstream 398760 17085462 ~ 17089500 (-)
ppm1ab ppm1ab,LOC107718411,LOC107697300,LOC107701489,LOC107589071,LOC107560378,LOC107743982 coding downstream 494896 16987308 ~ 16993364 (-)
tmem165 tmem165,LOC107683960,LOC107665411,LOC107718400,LOC107755243,LOC107601909,LOC107573988 coding upstream 79147 17631493 ~ 17636289 (-)
LOC122343120 LOC107746441,LOC107599206,LOC107661202 coding upstream 158849 17711195 ~ 17713523 (-)
LOC122343083 NA coding upstream 161400 17713746 ~ 17717051 (-)
LOC122343057 NA coding upstream 165418 17717764 ~ 17719790 (-)
LOC122342227 NA coding upstream 167802 17720148 ~ 17726796 (-)
G29212 NA non-coding downstream 138754 17349289 ~ 17349506 (-)
G29179 NA non-coding downstream 268807 17219151 ~ 17219453 (-)
G29143 NA non-coding downstream 447426 17038827 ~ 17040834 (-)
G29127 NA non-coding downstream 461921 16955455 ~ 17026339 (-)
LOC122342882 NA non-coding downstream 563295 16908209 ~ 16924965 (-)
G29273 NA non-coding upstream 1416 17553762 ~ 17553964 (-)
G29388 NA non-coding upstream 90033 17642379 ~ 17642637 (-)
G29408 LOC107755246,LOC107683958,LOC107718397 non-coding upstream 147078 17699424 ~ 17701373 (-)
LOC122343157 tatdn1 non-coding upstream 180057 17732403 ~ 17733334 (-)
G29420 NA non-coding upstream 197465 17749811 ~ 17814034 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 366131 17118343 ~ 17122129 (-)
G29135 NA other downstream 470437 17006927 ~ 17017823 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other downstream 587965 16886153 ~ 16900295 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other downstream 779300 16707774 ~ 16708960 (-)
G28898 NA other downstream 1555396 15932494 ~ 15932864 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 84677 17637023 ~ 17638742 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other upstream 182260 17734606 ~ 17744543 (-)
G29417 NA other upstream 183004 17735350 ~ 17736274 (-)
G29473 NA other upstream 418259 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 856214 18408560 ~ 18428343 (-)

Expression


Co-expression Network