btbd6b (btbd6b,LOC107589075,LOC107755235,LOC107718408,LOC107560384,LOC107701487,LOC107683969)


Basic Information

Item Value
gene id btbd6b
gene name btbd6b,LOC107589075,LOC107755235,LOC107718408,LOC107560384,LOC107701487,LOC107683969
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17138065 ~ 17143280 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236665.1
AAGAGAGGGGCTGGCTGAGGGAGGCGCCTCTGGGCCACTGACGTCCGAGTCACTCGTAGTTTGATTTGTCAACAGAGAGCTGGGCGTCCTCGGCCGTCACACAAAACGGGCTTTACGGTACAGAGTAGATGAGCTTGAGAGGGGATGCACCACAGATATGTGTAGGATGACAAGGACCGAGTAGCATTTTCCGTGGTCGACTCTAAATTTATTTAACCGACCGTGGCGCTTGGCTTTACTCGCGCCGTGTTATTTTCACTTGCAATAAAGTCGCGAATGGGCTCGAGATCAAGGATCGCGAGGATGCgatgagaaagaggaaaaaaagtctTCGAGCTGGAATATTTCCGCCGGATGGATTCACTGATGCAGTTTCGCAAATGCGTTGAAAATGGGGGGGAAACCGCAACGGAAGCGCGTGTGTTTTTGAGTAGCCGAGGCTTGTAGTTTGCAGTTAAATTAAAGGAGCCGTTTTTCCCCGCTACACCTGCCTTTTAATTACTCCGCAGACTGGTGGATAGACTCGCTGATGCCAACAACGCCAGATTGCCTATATGGCAGGATCATGAAGTTTTTGACGTTTTTCCTTTTGCTTCCAGAAACCTTAAAGAGGACTAGAAAGAGTGGGAAACAGCTCAGCAAGCTGCCAGTATGCTATGAAATCGTGACTTTGTCCTTGAGGAAGAAGATGGCTGCAGAACTCTATCCTGCCAGCATAAACACCAACCTTCCGAACGGTAACGGCACAGCGGTTACATCTGCCAGCAAAAAGAGCATCGTCCAAGTCACTCAAACGGTGACGACGCCGACTACAACTGCCACTCAGCAGAACATCAACAATAATAACGTCGAGACCGCCAGCTGGCAGTCCACTCACCCGACGCTGCGAGAGAGGAATGCTTTGATGTTCAATAACGAACTCATGGCAGATGTTCATTTCGTTGTGGGTCCGCCTGGCGCATCCCAAAAAGTTCCAGCGCACAAGTATGTGCTGGCGGTGGGGAGTTCTGTTTTTGGTGCCATGTTTTACGGAGATCTAGCGGAAGGAGAATCTGAGATTCACATTCCTGACGTGGAGCctgctgcttttttaattctTCTTAAGTACATGTACAGTGATGAGATTGAACTTGAAGCGGACACAGTGCTGGCCACTCTGTACGCTGCCAAAAAGTATATAGTGCCTGCACTGGCTAAAGCCTGTGTCACCTTTCTGGAGACTAGCCTGGAGGCCAAAAATGCCTGTGTGTTGTTGTCCCAGAGCCGACTGTTCGAGGAGCCTGAGCTGACCCAGCGGTGTTGGGAGGTCATTGATGCTCAGGCCGAGCTGGCGCTTCGCTCTGAGGGTTTCTGTGAGATTGATCTTCAAACGCTGGAGATCATACTAAAGCGAGAGACTCTAAACACCAGAGAGGCGGTGGTCTTCCAGGCAGCTCTCGATTGGGCTGTGGCTGAATGCAAAAGGCAGGGACTGGGACCAACCTCTCGTAATAAAAGGGCAGTACTGGGCAAGGCTCTCTACTTGGTTCGTATCCCAACCATGACCCTGGAGGAGTTCGCCAATGGGGCCGCACAGTCAGACGTTTTAACTCTGGAAGAGACTCATGATGTCTTCCTGTGGTACACGGCAGCCAATAAGCCCAAGCTGGAATTCCCGATGCAGAAAAGAAAGGGTCTGACGCCACAGCGCTGCCATCGTTTCCAGTCCTCGGCTTACCGTAGTAACCAGTGGCGCTACCGCGGACGTTGTGATAGCATTCAGTTTGCGGTGGATAAGAGGATCTTCATCGCAGGGCTCGGCTTGTACGGTTCCAGCGGTGGAAAGGCAGAGTATAGCGTCAAGATTGAACTCAAGCGCCAAGGTGTGACCCTGGCCCAGAACCTAACAAAATTTGTTTCAGATGGATCCAGCAACACCTTCTCGGTATGGTTTGAACACCCAGTCCAAGTGGAGCAGGACACCTTCTACACAGTCAGTGCCGTATTGGATGGGAACGAACTAAGCTACTTCGGACAGGAGGGTATGACGGAAGTGCAATGTGGAAAGGTGACCTTCCAGTTCCAGTGTTCCTCAGACAGTACTAACGGAACGGGAGTACAGGGGGGTCAGATCCCAGAGCTGGTCTTCTATGCCTAAAATTGTCCGTATTACAGTGCATTCCACTCACTGGAATTAGGAGGGATTGAATACAGGGTCTTGTGAGGCTCTAGCCTTTATTATGTAGCAGATGGTAATGGCGCTTCAGAACCACAGCGGACTCAGATGGAAGGAATGttcttcagctttatttattgcaaaaattatatatttgatttaattattgacACTGCAGCAAGCAGATCtctatacagtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtataatatacacGCACATAAATGAAGATAGTTGTACTGCTCTGATAGTGGACGGAAGCCACTAGTGTGTCATGTTTTGtacataaattatttgttttcagcTTGATGCTGactgacaaataaaatgtcttgtATTAGTGATCAGCTTCCTGAACTTcagattataaatgtttttgtgactcaaatacaaagttgtttttacttattCATGACATGCATAAACAATTATGCTATTCTGCTCAATCCTGATTTTAGTAATGAAGAGAGGTTGAACTAAATCTATATTTTCAATGCCCTAAAAGTGTATGGtatatacactaaaataaaatactttgaaTGAGGTAA
>XM_043236666.1
GTGCAAGCCCaaccccctctctctctctctcacacacacacacacacacagcacactgtAGATTTAACATGGCTCCTGTCTGCCAGCGAGCCTTCAAACATCAAACCTGAATGTATTTTCCTGGCAGCTGCGCTTCGCTCGGCTCAATAAGAAACCTTAAAGAGGACTAGAAAGAGTGGGAAACAGCTCAGCAAGCTGCCAGTATGCTATGAAATCGTGACTTTGTCCTTGAGGAAGAAGATGGCTGCAGAACTCTATCCTGCCAGCATAAACACCAACCTTCCGAACGGTAACGGCACAGCGGTTACATCTGCCAGCAAAAAGAGCATCGTCCAAGTCACTCAAACGGTGACGACGCCGACTACAACTGCCACTCAGCAGAACATCAACAATAATAACGTCGAGACCGCCAGCTGGCAGTCCACTCACCCGACGCTGCGAGAGAGGAATGCTTTGATGTTCAATAACGAACTCATGGCAGATGTTCATTTCGTTGTGGGTCCGCCTGGCGCATCCCAAAAAGTTCCAGCGCACAAGTATGTGCTGGCGGTGGGGAGTTCTGTTTTTGGTGCCATGTTTTACGGAGATCTAGCGGAAGGAGAATCTGAGATTCACATTCCTGACGTGGAGCctgctgcttttttaattctTCTTAAGTACATGTACAGTGATGAGATTGAACTTGAAGCGGACACAGTGCTGGCCACTCTGTACGCTGCCAAAAAGTATATAGTGCCTGCACTGGCTAAAGCCTGTGTCACCTTTCTGGAGACTAGCCTGGAGGCCAAAAATGCCTGTGTGTTGTTGTCCCAGAGCCGACTGTTCGAGGAGCCTGAGCTGACCCAGCGGTGTTGGGAGGTCATTGATGCTCAGGCCGAGCTGGCGCTTCGCTCTGAGGGTTTCTGTGAGATTGATCTTCAAACGCTGGAGATCATACTAAAGCGAGAGACTCTAAACACCAGAGAGGCGGTGGTCTTCCAGGCAGCTCTCGATTGGGCTGTGGCTGAATGCAAAAGGCAGGGACTGGGACCAACCTCTCGTAATAAAAGGGCAGTACTGGGCAAGGCTCTCTACTTGGTTCGTATCCCAACCATGACCCTGGAGGAGTTCGCCAATGGGGCCGCACAGTCAGACGTTTTAACTCTGGAAGAGACTCATGATGTCTTCCTGTGGTACACGGCAGCCAATAAGCCCAAGCTGGAATTCCCGATGCAGAAAAGAAAGGGTCTGACGCCACAGCGCTGCCATCGTTTCCAGTCCTCGGCTTACCGTAGTAACCAGTGGCGCTACCGCGGACGTTGTGATAGCATTCAGTTTGCGGTGGATAAGAGGATCTTCATCGCAGGGCTCGGCTTGTACGGTTCCAGCGGTGGAAAGGCAGAGTATAGCGTCAAGATTGAACTCAAGCGCCAAGGTGTGACCCTGGCCCAGAACCTAACAAAATTTGTTTCAGATGGATCCAGCAACACCTTCTCGGTATGGTTTGAACACCCAGTCCAAGTGGAGCAGGACACCTTCTACACAGTCAGTGCCGTATTGGATGGGAACGAACTAAGCTACTTCGGACAGGAGGGTATGACGGAAGTGCAATGTGGAAAGGTGACCTTCCAGTTCCAGTGTTCCTCAGACAGTACTAACGGAACGGGAGTACAGGGGGGTCAGATCCCAGAGCTGGTCTTCTATGCCTAAAATTGTCCGTATTACAGTGCATTCCACTCACTGGAATTAGGAGGGATTGAATACAGGGTCTTGTGAGGCTCTAGCCTTTATTATGTAGCAGATGGTAATGGCGCTTCAGAACCACAGCGGACTCAGATGGAAGGAATGttcttcagctttatttattgcaaaaattatatatttgatttaattattgacACTGCAGCAAGCAGATCtctatacagtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtataatatacacGCACATAAATGAAGATAGTTGTACTGCTCTGATAGTGGACGGAAGCCACTAGTGTGTCATGTTTTGtacataaattatttgttttcagcTTGATGCTGactgacaaataaaatgtcttgtATTAGTGATCAGCTTCCTGAACTTcagattataaatgtttttgtgactcaaatacaaagttgtttttacttattCATGACATGCATAAACAATTATGCTATTCTGCTCAATCCTGATTTTAGTAATGAAGAGAGGTTGAACTAAATCTATATTTTCAATGCCCTAAAAGTGTATGGtatatacactaaaataaaatactttgaaTGAGGTAA

Function

symbol description
btbd6b Predicted to be involved in neurogenesis. Predicted to act upstream of or within cell differentiation and nervous system development. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Is expressed in several structures, including myotome; nervous system; neural crest; neural tube; and otic vesicle. Orthologous to human BTBD6 (BTB domain containing 6).

NR:

description
BTB/POZ domain-containing protein 6-B-like

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007399 nervous system development biological_process
GO:0000932 P-body cellular_component

KEGG:

id description
K10478 BTBD3_6; BTB/POZ domain-containing protein 3/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236665.1 True 2726 mRNA 0.48 4 17138065 17141802
XM_043236666.1 False 2278 mRNA 0.47 5 17138065 17143280

Neighbor

gene id symbol gene type direction distance location
LOC122342663 NA coding downstream 7800 17123907 ~ 17130265 (-)
ckbb ckb,ckbb,LOC107560383,LOC107755234,LOC101477834 coding downstream 48565 17085462 ~ 17089500 (-)
ppm1ab ppm1ab,LOC107718411,LOC107697300,LOC107701489,LOC107589071,LOC107560378,LOC107743982 coding downstream 144701 16987308 ~ 16993364 (-)
six6b six6b,six6,LOC107589092,LOC107743981,LOC107697293,LOC107701490,LOC103035477,LOC108257662 coding downstream 179991 16955520 ~ 16958074 (-)
hif1ab hif1a,LOC107589062,LOC107743977,LOC107563689 coding downstream 256670 16868461 ~ 16881395 (-)
LOC122343418 LOC107683962,LOC107701452,LOC107755208,LOC107601897,LOC107568118,LOC107718425 coding upstream 267738 17411018 ~ 17482755 (-)
daam1b daam1b,LOC107701451,LOC107755211,LOC107718401,LOC108412077 coding upstream 344980 17488260 ~ 17552346 (-)
tmem165 tmem165,LOC107683960,LOC107665411,LOC107718400,LOC107755243,LOC107601909,LOC107573988 coding upstream 488213 17631493 ~ 17636289 (-)
LOC122343120 LOC107746441,LOC107599206,LOC107661202 coding upstream 567915 17711195 ~ 17713523 (-)
LOC122343083 NA coding upstream 570466 17713746 ~ 17717051 (-)
G29143 NA non-coding downstream 97231 17038827 ~ 17040834 (-)
G29127 NA non-coding downstream 111726 16955455 ~ 17026339 (-)
LOC122342882 NA non-coding downstream 213100 16908209 ~ 16924965 (-)
G29021 NA non-coding downstream 436394 16701068 ~ 16701671 (-)
G29012 NA non-coding downstream 528066 16609636 ~ 16609999 (-)
G29179 NA non-coding upstream 75871 17219151 ~ 17219453 (-)
G29212 NA non-coding upstream 206009 17349289 ~ 17349506 (-)
G29273 NA non-coding upstream 410482 17553762 ~ 17553964 (-)
G29388 NA non-coding upstream 499099 17642379 ~ 17642637 (-)
G29408 LOC107755246,LOC107683958,LOC107718397 non-coding upstream 556144 17699424 ~ 17701373 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other downstream 15936 17118343 ~ 17122129 (-)
G29135 NA other downstream 120242 17006927 ~ 17017823 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other downstream 237770 16886153 ~ 16900295 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other downstream 429105 16707774 ~ 16708960 (-)
G28898 NA other downstream 1205201 15932494 ~ 15932864 (-)
srd5a3 srd5a3,LOC107755245,LOC107683999,LOC107665336,LOC107601910 other upstream 493743 17637023 ~ 17638742 (-)
LOC122342228 scgn,LOC107693759,LOC107757885,LOC107669120,LOC107714763,LOC107747999,LOC107663245 other upstream 591326 17734606 ~ 17744543 (-)
G29417 NA other upstream 592070 17735350 ~ 17736274 (-)
G29473 NA other upstream 827325 17970605 ~ 17979922 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other upstream 1265280 18408560 ~ 18428343 (-)

Expression


Co-expression Network