zgc:194209 (zgc:194209,LOC107584030,LOC107658744,LOC107725912)


Basic Information

Item Value
gene id zgc:194209
gene name zgc:194209,LOC107584030,LOC107658744,LOC107725912
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1463584 ~ 1468477 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236688.1
CACACTTCAGCGCGGAGAGCAGCGCGTCGTCTTTCATGGCGTCCGTGAGCACACGCTGAACTTTATACAACTCTGAGAAAGACGCAACCATGTTAGGGGCCGGTCCTGTAAAGGTTTTGTTGCTGGCAGTTTCAGTCGGTGTGTATCTCATTCCCTCCCCTATTGATCCTGAGCCGTACACATTCGAGGGCCCCCCGCCTGCCCTGGACGGCCCTCTGGCAGTAAACACACGGTTACAGAGAGGTCGGCGACTGTTTTCTGGTCAAGTCAAAGGCCTGGAGTCTTTCACGGCTGACCAGAACGGGAACATCTACACAGGCTCCGTCGACGGGAAGTTGTGGAGAATCAGCAACGGATCGCTCTCTTTCGTCACTCAGATGGGCCAAAACATCCCTGAATGTGGCACGAGTATGGACTATGAGCCAGTGTGTGGTCGTCCTCATGGTCTGCGTCTGGACAGAAACGGGCAGCTCATTGTGGCCGACTCTTATCAGGGGCTGTTCAAGGTTGACCCCTGGACTGGAGAGAAGACGCTGCTGTATTCCAGCAAAGTGGGAGCTGATGGGATTCCCTTTGGCTTTCTGAACGGTCTGGAGATTTCTAAAGACGGAACTGTGTTTTTCACGGACTCCAGCAGTAAATGGGGAAGGCGTCACGTCCGTTATGAGGTGTTGGAGACAAACCACCTGGGTCGCCTTCTCTCGTTTGACCCTGTGACCGGCCGTGTTCGGGTGTTGTTGGATTCTCTCTACATGCCTAATGGCTTTGCCTTCTCACCTGATGAGGACTTCCTCCTCCTGGCTGAGACCAGTGTCGCACGTATTACAAAGTTCTGGTTGAAAGGACCTAAAGCGGGCACCAAGGAGGTCCTCCTGAACAACATGATCGGTTATCCTGATAACATTCGTCTCAGTGACCGCGGCACGTTTTTAGTGGGCATAACCACCATTAGATTCAGAGGACAACTTTTCCCACCGTTCTTGGATCTGATTGGCCCGTATCCTGCTCTTAAACGCTTCATAGTGAAGCTCGTTCCTCTCAGCTGGTACAATGTTCTGCTGCCCAAGTACGGCTTGATTCTGGAGGTGGGGCCTGCTGGAGAGGTGATGGACAGCCTCCATGACCCCACGGGCAGCCTCACGTGGGCCATCAGCGACGTCTTCCAGCAGGGGACACAGTACTACCTGGGCAGCACTGACCTGCCGTTCCTGCCTGTTCTGGACGAGTGGAGCTGACCGTCTGAGACGCTTACAGGTGGAAAACCTTCATAGAGAATGTAAAACGATTTCCTTTTAACAACGCACTGCTGTCTTGCGAAGGAATTGCTTGTGGTTCTAACTGTGATTTCTGACTTTAAGTCTATGGTGCTATAATTTGTCTAAAACGCGTTTTAACTATTAGTGCCacattctgttttgttttatgtttttctgaACTGCAAAATGCACCGGTCAGCATGTACACTAGAAATGGAAGATTCGGAAGCATAGCTGTTcccaataaaaatgcaatataatgcaaaagacaaaaataacatgttGCACTATTTAGTGGGAGTCAGAAATCCTTAGAgaatcaagcaaaaaaaacaacaacactgcaacaaaaatatttcagaatgctTTTATCAATCAAACACACAAGACAAGCATCCACATCGACCATCGCAATGCGATTAACAAATATGATGAAAGAATTATGTGCAAAACTTTATTGTCAGGCTTGTTGATCACAGACTGGAAAGTGCTTCACTAAACGGATATGTTAAAGTATTGTAAGAAAGATACCTCTCGGATGACTCAAGATATTGCCAGTAACAGCAGAAGACTGATGAAGGTTAGGCAGAAGGATGAAAGTTAAACAGTCCCTTAAACAGTCCTAAGTTTCCCT

Function

symbol description
zgc:194209 Predicted to enable strictosidine synthase activity. Predicted to act upstream of or within biosynthetic process. Orthologous to human APMAP (adipocyte plasma membrane associated protein).

NR:

description
adipocyte plasma membrane-associated protein-like

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016844 strictosidine synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236688.1 True 1890 mRNA 0.48 9 1463584 1468477

Neighbor

gene id symbol gene type direction distance location
rassf3 rassf3,LOC107711494,LOC107656425,LOC107658927 coding upstream 348 1430618 ~ 1463236 (+)
LOC122342464 LOC107658928 coding upstream 34158 1424627 ~ 1429426 (+)
dgki dgki,LOC107658929,LOC107656386 coding upstream 37768 1386513 ~ 1425816 (+)
creb3l2 creb3l2,LOC107656406,LOC107579521,LOC107711498,LOC107583953,LOC107726033,LOC107658932 coding upstream 77761 1369392 ~ 1385823 (+)
ssbp1 ssbp1,LOC107656434,LOC107658933,LOC107583954 coding upstream 94839 1366719 ~ 1368745 (+)
tbc1d30 tbc1d30,LOC107658925,LOC107725910,LOC107584031 coding downstream 5276 1473753 ~ 1486677 (+)
ntf3 LOC107658772,LOC107584056,LOC107725959,LOC107656423,LOC107579734,LOC107711475 coding downstream 35567 1504044 ~ 1519640 (+)
LOC122342591 LOC107579910,LOC107711477,LOC107656438,LOC107584057,LOC107658998,LOC107725909 coding downstream 53143 1521620 ~ 1526208 (+)
cd9b LOC107658922,LOC107725937,LOC107583958,LOC107656430,LOC107711492 coding downstream 99787 1568264 ~ 1575414 (+)
si:dkey-14d8.1 si:dkey-14d8.1,LOC107658880,LOC107725921,LOC107579331,LOC107583961,LOC107656391 coding downstream 136312 1604789 ~ 1609142 (+)
G24925 NA non-coding upstream 176511 1286612 ~ 1287073 (+)
LOC122342413 NA non-coding upstream 336204 1112895 ~ 1127380 (+)
G24811 NA non-coding upstream 530473 864840 ~ 933111 (+)
G24768 LOC107718544,LOC107658747,LOC107590532 non-coding upstream 811991 649509 ~ 651593 (+)
G24758 NA non-coding upstream 838359 623251 ~ 625225 (+)
G24968 LOC107583957,LOC107656385,LOC107579307,LOC107711491 non-coding downstream 87915 1556392 ~ 1557778 (+)
G25071 NA non-coding downstream 220501 1688978 ~ 1693389 (+)
G25030 NA non-coding downstream 320154 1788631 ~ 1789276 (+)
G25086 NA non-coding downstream 362201 1830678 ~ 1830968 (+)
LOC122342405 NA non-coding downstream 431419 1899896 ~ 1901886 (+)
LOC122342419 coa6,LOC107726010,LOC107583951,LOC107658937 other upstream 131741 1329452 ~ 1331843 (+)
ndufa5 ndufa5,LOC107725958,LOC107658774,LOC107579922 other upstream 172360 1288297 ~ 1291224 (+)
LOC122342481 LOC107584054,LOC107658775,LOC107725972,LOC107711476,LOC107581286,LOC107656415,LOC107725915 other upstream 214415 1245578 ~ 1249169 (+)
G24771 plekha5,LOC107584023,LOC107658747 other upstream 798054 654092 ~ 665530 (+)
gpr22a gpr22a,LOC107658958,LOC107583929,LOC107729153,LOC107708019,LOC107590528,LOC107656448 other upstream 1024232 434343 ~ 439352 (+)
LOC122343488 NA other downstream 202035 1670512 ~ 1672959 (+)
LOC122342451 NA other downstream 315760 1784237 ~ 1788096 (+)
lyrm5a LOC107725960,LOC107578730,LOC107658915,LOC107710125,LOC107583994 other downstream 525763 1994240 ~ 1995536 (+)
ninj2 ninj2,LOC107725989,LOC107584020,LOC107743858,LOC107656339,LOC107658851,LOC107581271 other downstream 1631260 3099737 ~ 3117994 (+)
erc1b erc1,LOC107725987,LOC107656325,LOC107580227,LOC107743718 other downstream 1651038 3119515 ~ 3306758 (+)

Expression


Co-expression Network