pawr (pawr,LOC107694180,LOC107591114,LOC107755907,LOC107734443,LOC107680012)


Basic Information

Item Value
gene id pawr
gene name pawr,LOC107694180,LOC107591114,LOC107755907,LOC107734443,LOC107680012
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 11165268 ~ 11213298 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043236690.1
TTCACCTGGGCTCCTGATGAACGTTCACGCGCGGAGCAGGTGAGCTTCACCGGGCGCTATCTTTCCAAAACAGCACTTTTTCGACAGTTTTTGAGTCTTCTTAAGCGAGTTCGCGCGAGTCACGACCAACTTTAAACGCGAACtttgtagatattttaaaacaacctcCAAACGCTTCCGAGGAATGCGGCGGATCTGAACcgcgttttttttgtttgtttgcgttTACAAAGCGATTCGGGCGGCACGAGGCAACCCAAAAAGGAAACCATGGCAACAGGAGGATTTAAATCGAACAGCGCGACGGACTTTCTGGAGGAATGGAAAGCAAAGCGTGAGAAGATGAGGGCAAAGATGCTTGGAGATATCGCCGCCGCCACCGGGAGAACCACTGAGTTAAACAACAACGGCAGCTCGGTTAACTGCGTCTCCTCTTCGTCCTCCTATCCGGTGTCTCGGTCTTCCTCTTCGACCGCTTTGAAGGACGAACCGAAGAAACCCGAGCCGCCCGGGGAAAACTTGAAGAAGACGCCGGAGAAAGTGAGCGGTGTCCCGCAGGCGGAGAGCTCGAGCCCCGCCGGAGTGGATGACAGTGATAAGGAGAGTCCCACGCACAGCAAGAGCAAAGAGAAGAAGAGCTCAGGGCCCAGCGCCAGAAAGGGCAAAGGACAGATCGAGAAAAGGAAGTTAAGAGAGAAGAGGAGGTCAACAGGTGTTGTCAGCATACCGTCCAATGAGAGCTTGGATGAGCTCGATGACGATGATGGAGAGGAGAAGGAGAGGAAGATGGAAGAAAGTCTTACGCAGCACAACACGGTCCAGAACGAGGCGATGACCCCTGACCCCGGCGCAGCCTGCTCCGTACAGgacaCTCCGAGATCCAGAAGTCATAAGAGCGATGAAGACGGAAACAGACATCGTCATCGACACGGAAAGGAAGGCAGCAGCGCCTAGCCCACGAACCTGGAGAGAAGGATAGAGGAGCTAGAAAGGGAGCTGGCCATGGAGAGGCAGGAGAACAGCCGCCTGTTGAACGCTCACCAGGACAAGGACGAGTTGATTGTTAAGCTGAAGGAGGAGATTGACCTGCTAAACCGGGATCTGGATGATATTGAAGATGAGAACGAGCAGCTCAAACAGGAAAATAAGACCTTGCTCAAAGTGGTCGGTCAACTCACCAGGTAGAACCCGGCGCCCCGAGGATGGCTGAGACGTCTGGCTTTGCTGAACGACGCCTGCCTCTGTCCTTTACGTGTTCTGCTCTGGTCTAACgtgtctgtcttgtcttgtcgtCGCTCTCTGGAAGAGGATGCGTGCGCGCCTTTAGGGAAGCCTTCGAGAACCCGGACCTAAAAGCGAGCCGCCCGACGGGGTGTTAACGGAGGCCTCCCGCTTTCACGGAGGTTGTCAAAAGGAACTGGCCttctatttaatgtaaatgtgtgtacaTAGGCTGTGCTGACTGTTCTTTTGAGGCTTACGCAGGACAACGAAAAGAGGAAATGCCTTTGAATGTACGTGGTGCGGCAccaaattattttctttcctttgtttTTCTAGCCCCGAGGGCTTCTTACATTCAAATCTCAAATTGTTCGAATTGCACTTTTAGGATATTCCGGCTTTCACTATTAGTTTAAAGTTGCCACAATTgcctttacatttaaagtttgtCTCTTTAACGCACATCATTACCTGTGAGTCCAAAAAGTGCCTGTTGGACAGGAGCCCAGATCTATACTTACGGccttattttaaacagttgGCGGTACTAAGACCGATTCCGTGTTTTAGCGCAATGAACGTCTCCGGCTTGGACCTTGCAAATGTTGTAATGAATATTATCTGTTATTGTCTGATTTCTACATTTTACTCGATGTTCAAATGTTTACAAGTTTTGGTATCAATAGATGTAGCTATTCATTGTATACTGTTAGCCTAGGCTGCTGCTGTGCGTTTTCAAAATAACCGACTCAATTGGAGACGTTGAGCACAATCATGTGGTCTCTTATAGGCGATATGACTTATTACTTTAAGTTGCTATTGCAAGGTCATCACTTTAGAGGTTCATATCTACATCGATGCTAATATACAATTGCTTATGAAATGTATTCTGTAAGGTCATTGGAGGGggtatcttttcttttttttttttctagaatgtATAGCGGTGGGAGATATCTGTATCCCGCCGCTTTACATAATGCTTGTACAGAAGATTGAgtaaaagtcaataaaaattTTTCATggcaa

Function

symbol description
pawr Acts upstream of or within regulation of vascular permeability. Predicted to be active in cytoplasm. Is expressed in several structures, including alar plate midbrain region; anterior axial hypoblast; nervous system; polster; and solid lens vesicle. Orthologous to human PAWR (pro-apoptotic WT1 regulator).

NR:

description
PRKC apoptosis WT1 regulator protein-like isoform X2

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0043114 regulation of vascular permeability biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043236690.1 True 2253 mRNA 0.48 6 11165268 11213298

Neighbor

gene id symbol gene type direction distance location
ints13 asun,LOC107590623,LOC107738827,LOC107589038,LOC107733003 coding downstream 479317 10676477 ~ 10685951 (-)
napepld napepld,LOC107738826,LOC107694176 coding downstream 519509 10637783 ~ 10645759 (-)
stk38l stk38l,LOC107738822,LOC107590537,LOC107694172,LOC107699048 coding downstream 681167 10477213 ~ 10484101 (-)
LOC122342626 gsap,LOC107733001,LOC107699053,LOC107557299,LOC107694141,LOC107591096 coding downstream 688287 10463761 ~ 10476981 (-)
fgl2a fgl2a,LOC107694171,LOC107590533,LOC107557300,LOC107733002,LOC107699052 coding downstream 713461 10448839 ~ 10451807 (-)
ppp1r12a ppp1r12a,LOC107749073,LOC107755884,LOC107694147,LOC107680011 coding upstream 7238 11220536 ~ 11275588 (-)
rps16 rps16,LOC107590675,LOC103382554 coding upstream 82998 11296296 ~ 11298238 (-)
lin7a lin7a,LOC107755905,LOC107590687 coding upstream 125043 11338341 ~ 11376262 (-)
hcls1 hcls1,LOC107755885,LOC107694186,LOC107710670,LOC107680042,LOC105023407,LOC103459100 coding upstream 361877 11575175 ~ 11582303 (-)
golgb1 golgb1,LOC107694188,LOC107755883,LOC107590726,LOC107710669,LOC107590960 coding upstream 369464 11582762 ~ 11602022 (-)
LOC122342624 LOC107694146 non-coding downstream 232867 10930597 ~ 10932401 (-)
G27940 NA non-coding downstream 444984 10714630 ~ 10720284 (-)
G27910 NA non-coding downstream 505294 10649898 ~ 10659974 (-)
G27894 lrtm2a,lrtm2,LOC107738823,LOC107590570,LOC107694175,LOC107732983 non-coding downstream 602496 10446435 ~ 10562772 (-)
G27883 NA non-coding downstream 775463 10389447 ~ 10389805 (-)
LOC122343274 NA non-coding upstream 405152 11618450 ~ 11648423 (-)
G28029 NA non-coding upstream 472434 11685732 ~ 11688800 (-)
G27987 sema3c,LOC107710663,LOC107755880,LOC107680038,LOC107694195 non-coding upstream 567661 11780959 ~ 11804910 (-)
LOC122342677 NA non-coding upstream 580985 11794283 ~ 11820297 (-)
G28033 NA non-coding upstream 585268 11798566 ~ 11815305 (-)
dcp1b dcp1b,LOC107590561,LOC107738825,LOC107733007,LOC107589040,LOC107699046,LOC107694173 other downstream 631725 10524531 ~ 10533543 (-)
cacna2d4a cacna2d4a,cacna2d4,LOC107694142,LOC107738821 other downstream 643019 10484922 ~ 10522249 (-)
zgc:193726 NA other downstream 801702 10355711 ~ 10363566 (-)
uhrf1bp1l uhrf1bp1l,LOC107695888,LOC107744929,LOC107664877,LOC107589017 other downstream 1865089 9271972 ~ 9300179 (-)
klhl42 klhl42 other downstream 2155964 9004260 ~ 9009304 (-)
ppfia2 ppfia2,LOC107694182,LOC107755902,LOC107680027 other upstream 201422 11414720 ~ 11573766 (-)
kmt2e kmt2e,LOC107590817,LOC107590964,LOC107710662 other upstream 440172 11653470 ~ 11683862 (-)
magi2a magi2a,LOC107680009,LOC107755877,LOC107591172,LOC107694149,LOC107590979 other upstream 628667 11841965 ~ 11996639 (-)
G28093 slc35e3,LOC107710682,LOC107556774,LOC107737854 other upstream 801333 12014631 ~ 12015767 (-)
cpm cpm,LOC107728505,LOC107710685,LOC107666948,LOC107669712 other upstream 1252314 12465612 ~ 12489181 (-)

Expression


Co-expression Network